FFCP PHASE1:Hg19::chr20:60900330..60900345,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:60900330..60900345,- to FFCP PHASE1:Hg19::chr20:60900330..60900345,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3911 | |EntrezGene=3911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6485 | |HGNC=6485 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-403bp_to_ENST00000464134_5end | |||
|cluster_id=chr20:60900330..60900345,- | |||
|description=CAGE_peak_4_at_LAMA5_5end | |||
|id=chr20:60900330..60900345,- | |||
|ontology_enrichment_celltype=CL:0000066!9.40e-18!254;CL:0000039!9.51e-07!7;CL:0000586!9.51e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000313;2.65e-11;1!CL:0000083;2.25e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.53e-11,1;CL:0000083,3.44e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.57e-11;1!UBERON:0005754;9.04e-11;1 | |||
|ontology_enrichment_disease=DOID:305!1.56e-26!106;DOID:0050687!2.69e-24!143;DOID:162!3.08e-13!235;DOID:14566!8.17e-13!239 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.65e-11;1!DOID:3112;3.57e-11;1!DOID:1799;9.04e-11;1!DOID:10165;9.04e-11;1!DOID:1798;9.04e-11;1!DOID:1793;2.25e-10;4!DOID:170;3.35e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.53e-11,1;DOID:3112,4.15e-11,1;DOID:1799,1.77e-10,1;DOID:10165,1.77e-10,1;DOID:1798,1.77e-10,1;DOID:1793,3.44e-10,4;DOID:305,1.58e-07,106;DOID:170,4.44e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.96e-07!115;UBERON:0001007!5.77e-07!155;UBERON:0001555!5.77e-07!155;UBERON:0007026!5.77e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;2.65e-11;1!UBERON:0000998;9.04e-11;1!UBERON:0002146;9.04e-11;1!UBERON:0006868;9.04e-11;1!UBERON:0005623;9.04e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,2.53e-11,1;UBERON:0000998,9.05e-11,1;UBERON:0006868,9.05e-11,1;UBERON:0002146,1.33e-10,1;UBERON:0005623,1.33e-10,1 | |||
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| ||
|short_description=p4@LAMA5 | |||
}} | }} |
Latest revision as of 10:22, 17 September 2015
Short description: | p4@LAMA5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LAMA5_5end |
Coexpression cluster: | NA |
Association with transcript: | -403bp_to_ENST00000464134_5end |
EntrezGene: | LAMA5 |
HGNC: | 6485 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.53e-11 | 1 |
epithelial cell of pancreas | 3.44e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.53e-11 | 1 |
seminal vesicle | 9.05e-11 | 1 |
seminal fluid secreting gland | 9.05e-11 | 1 |
pulmonary valve | 1.33e-10 | 1 |
semi-lunar valve | 1.33e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.53e-11 | 1 |
papillary adenocarcinoma | 4.15e-11 | 1 |
islet cell tumor | 1.77e-10 | 1 |
endocrine pancreas cancer | 1.77e-10 | 1 |
pancreatic endocrine carcinoma | 1.77e-10 | 1 |
pancreatic cancer | 3.44e-10 | 4 |
carcinoma | 1.58e-07 | 106 |
endocrine gland cancer | 4.44e-07 | 6 |