FFCP PHASE1:Hg19::chr20:57467204..57467240,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:57467204..57467240,+ to FFCP PHASE1:Hg19::chr20:57467204..57467240,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2778 | |EntrezGene=2778 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4392 | |HGNC=4392 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=71bp_to_ENST00000468942,ENST00000492907_5end | |||
|cluster_id=chr20:57467204..57467240,+ | |||
|description=CAGE_peak_8_at_GNAS_5end | |||
|id=chr20:57467204..57467240,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.41e-12!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.75e-15!94;UBERON:0001016!2.75e-15!94;UBERON:0005743!6.99e-15!86;UBERON:0001017!1.28e-14!82;UBERON:0000955!1.05e-11!69;UBERON:0006238!1.05e-11!69;UBERON:0000475!1.73e-11!365;UBERON:0000924!9.16e-11!173;UBERON:0006601!9.16e-11!173;UBERON:0004121!7.66e-10!169;UBERON:0000033!9.00e-10!123;UBERON:0002616!1.56e-09!59;UBERON:0001049!2.44e-09!57;UBERON:0005068!2.44e-09!57;UBERON:0006241!2.44e-09!57;UBERON:0007135!2.44e-09!57;UBERON:0002619!4.00e-09!22;UBERON:0000153!4.13e-09!129;UBERON:0007811!4.13e-09!129;UBERON:0002020!7.37e-09!34;UBERON:0003528!7.37e-09!34;UBERON:0000956!1.18e-08!25;UBERON:0000203!1.18e-08!25;UBERON:0001893!1.56e-08!34;UBERON:0002791!2.24e-08!33;UBERON:0001869!2.89e-08!32;UBERON:0001950!3.95e-08!20;UBERON:0002780!7.08e-08!41;UBERON:0001890!7.08e-08!41;UBERON:0006240!7.08e-08!41;UBERON:0002346!1.53e-07!90;UBERON:0003080!2.60e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.51e-09;22!UBERON:0000956;3.38e-09;25!UBERON:0000203;3.38e-09;25!UBERON:0001950;1.49e-08;20!UBERON:0003528;4.16e-08;34!UBERON:0002020;4.16e-08;34!UBERON:0001869;4.54e-08;32!UBERON:0002791;5.40e-08;32!UBERON:0001893;8.24e-08;34!UBERON:0001017;6.87e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.04e-15,89;UBERON:0001017,2.39e-15,81;UBERON:0004121,2.08e-12,171;UBERON:0000924,2.08e-12,171;UBERON:0006601,2.08e-12,171;UBERON:0000955,2.22e-12,68;UBERON:0006238,2.22e-12,68;UBERON:0001049,5.69e-10,56;UBERON:0005068,5.69e-10,56;UBERON:0006241,5.69e-10,56;UBERON:0007135,5.69e-10,56;UBERON:0000073,3.37e-09,53;UBERON:0002616,3.37e-09,53;UBERON:0002619,3.43e-09,22;UBERON:0003528,6.34e-09,34;UBERON:0002020,6.34e-09,34;UBERON:0000956,1.02e-08,25;UBERON:0000203,1.02e-08,25;UBERON:0011216,1.26e-08,223;UBERON:0002346,1.35e-08,86;UBERON:0001893,1.35e-08,34;UBERON:0002791,2.23e-08,32;UBERON:0001869,2.52e-08,32;UBERON:0001950,3.45e-08,20;UBERON:0010314,5.74e-08,132;UBERON:0002780,6.21e-08,41;UBERON:0001890,6.21e-08,41;UBERON:0003080,6.21e-08,41;UBERON:0006240,6.21e-08,41;UBERON:0003075,1.33e-07,82;UBERON:0007284,1.33e-07,82 | |||
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| ||
|short_description=p8@GNAS | |||
}} | }} |
Latest revision as of 06:24, 17 September 2015
Short description: | p8@GNAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GNAS_5end |
Coexpression cluster: | NA |
Association with transcript: | 71bp_to_ENST00000468942, ENST00000492907_5end |
EntrezGene: | GNAS |
HGNC: | 4392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 1.04e-15 | 89 |
central nervous system | 2.39e-15 | 81 |
ectoderm-derived structure | 2.08e-12 | 171 |
ectoderm | 2.08e-12 | 171 |
presumptive ectoderm | 2.08e-12 | 171 |
brain | 2.22e-12 | 68 |
future brain | 2.22e-12 | 68 |
neural tube | 5.69e-10 | 56 |
neural rod | 5.69e-10 | 56 |
future spinal cord | 5.69e-10 | 56 |
neural keel | 5.69e-10 | 56 |
regional part of nervous system | 3.37e-09 | 53 |
regional part of brain | 3.37e-09 | 53 |
regional part of cerebral cortex | 3.43e-09 | 22 |
brain grey matter | 6.34e-09 | 34 |
gray matter | 6.34e-09 | 34 |
cerebral cortex | 1.02e-08 | 25 |
pallium | 1.02e-08 | 25 |
organ system subdivision | 1.26e-08 | 223 |
neurectoderm | 1.35e-08 | 86 |
telencephalon | 1.35e-08 | 34 |
regional part of telencephalon | 2.23e-08 | 32 |
cerebral hemisphere | 2.52e-08 | 32 |
neocortex | 3.45e-08 | 20 |
structure with developmental contribution from neural crest | 5.74e-08 | 132 |
regional part of forebrain | 6.21e-08 | 41 |
forebrain | 6.21e-08 | 41 |
anterior neural tube | 6.21e-08 | 41 |
future forebrain | 6.21e-08 | 41 |
neural plate | 1.33e-07 | 82 |
presumptive neural plate | 1.33e-07 | 82 |