FFCP PHASE1:Hg19::chr20:56283735..56283746,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:56283735..56283746,+ to FFCP PHASE1:Hg19::chr20:56283735..56283746,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:56283735..56283746,+ | |||
|coexpression_cluster_id=C367 | |||
|description=CAGE_peak_at_chr20:56283735..56283746,+ | |||
|id=chr20:56283735..56283746,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000244;7.47e-16;4!CL:0000731;7.47e-16;4!CL:0002368;1.71e-09;13!CL:1000507;1.17e-08;10!CL:1000494;1.17e-08;10!CL:1000449;5.04e-08;15!CL:1000497;5.31e-07;17!CL:0002518;5.31e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,7.78e-16,4;CL:0000731,7.78e-16,4;CL:0002368,1.85e-09,13;CL:1000507,1.07e-08,10;CL:1000494,1.07e-08,10;CL:1000449,4.63e-08,15;CL:1000497,4.93e-07,17;CL:0002518,4.93e-07,17;CL:0000066,6.94e-07,253;CL:0002076,9.03e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!2.49e-07!5;UBERON:0006554!7.39e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;2.16e-19;5!UBERON:0005910;4.20e-16;6!UBERON:0006554;1.18e-12;30!UBERON:0001008;1.18e-12;30!UBERON:0004211;1.17e-08;10!UBERON:0009773;1.17e-08;10!UBERON:0001231;1.17e-08;10!UBERON:0004810;1.17e-08;10!UBERON:0006555;5.04e-08;15!UBERON:0004819;5.04e-08;15!UBERON:0001285;5.04e-08;15!UBERON:0007684;5.04e-08;15!UBERON:0000486;7.42e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,2.25e-19,5;UBERON:0005910,4.34e-16,6;UBERON:0006554,3.51e-12,47;UBERON:0001008,7.36e-12,48;UBERON:0006555,4.95e-10,16;UBERON:0004819,4.95e-10,16;UBERON:0004810,1.07e-08,10;UBERON:0004211,4.63e-08,15;UBERON:0009773,4.63e-08,15;UBERON:0001231,4.63e-08,15;UBERON:0001285,4.63e-08,15;UBERON:0007684,4.63e-08,15;UBERON:0004208,4.63e-08,15 | |||
|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0,4.17747692052565,4.88460817580699,0,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0.286235987131057,0,3.01302335027527,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0.822335776043652,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0.818718450173537,0.224723484445085,0,0.320929027076094,1.27867425159808,0,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84606484554724,2.34894875748376,2.6759125968766,1.32171328579026,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0,0,0,2.3858578411533,7.78615792484217,0.283604451492204,0.665188192387692,0.702678285545008,0.0654895377488563,0,0,0,0,0,0.715471872916026,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0,0,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.773043412653187,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.31700342490351,0,0,0,0,0,0,1.15930404975077,0,0,0,0,1.58040879591855,0,0,0,0,2.81201501960331,5.20744597416465,0.992425680696705,0.0895585227028483,0,0.383382679165211,0,0,0.414656231081544,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,1.01637849688985,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,17.0430499757792,0,0,0,0,1.35359883872224,2.92658280996776,0.784349769176855,2.92278449306521,5.59423633132241,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0.623224249527161,0.991709492165869,2.49847087574638,3.57315594984836,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.384888450902048,1.34060455107157,2.17781969722645,0,8.6101074534246,6.73885902670502,3.10401107475673,12.8645104115897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,3.40963376167696,0.47748896947538,0,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0,0,1.94310496754094,0,0,9.61591357276397,0,0,0,0,0,0,0,0,0,1.13697999995054,0.724999575434793,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.468528891450678,0.182454789215666,0,0.242780379534093,0,0,0,0.189559738885464,0.150323419414493,0,2.65861549082874,0.661983911750998,0.941798755221676,0,0,0.277349346026277,0,0.0979923974143777,0.261177619741208,1.7472666824203,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0.0633107959558787,0.782205530939212,1.04206466326994,0.640358984218058,0,0,0,0,0,0,0,0.407712618220842,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0.558564802544508,0.687481272035051,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0.899895566206002,3.86900977278975,0.121499113316049,0,0.0788057072991982,0.209818352539992,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,1.16354660725395,0.52893040697076,0,0,0,0.157204305099666,0,0,0,0,0,7.07223144380316,8.27276650274911,14.0918965311192,9.50830629058433,0,0,0,0,0,0.221858103073705,0.372578417648301,0.276697269872462,2.37462775128003,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,66.3873827114533,0,0,0,0,0,0,0.496211178389294,0,3.57734797390867,0.535701835878287,0.336283722218824,0,0,0,0,1.02892805662451,0.0679697329768317,0,0,0.889851215136553,2.8257513426185,0,0,0,0,0,0.929195074296532,0.47404083519818,0,0,0,0,0,0,0,0,0,0.423387050190929,1.8328549483524,0.93061915699296,4.77769469488717,0,0.098150233615243,0.121917924982269,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0.308696632431779,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,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|phase1_expression=0,0.428201047781966,0.281908808191942,0,0,0,0,0,0,4.17747692052565,4.88460817580699,0,0.527533956456907,0,0,0,0,0,0,0.246242116153576,0,0.626909442956176,0.286235987131057,0,3.01302335027527,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,0,0,0,0,0,0,0,0.822335776043652,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0.818718450173537,0.224723484445085,0,0.320929027076094,1.27867425159808,0,0.199463657621632,0.852449501065388,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.84606484554724,2.34894875748376,2.6759125968766,1.32171328579026,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0.12786256184353,0,0,0,2.3858578411533,7.78615792484217,0.283604451492204,0.665188192387692,0.702678285545008,0.0654895377488563,0,0,0,0,0,0.715471872916026,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0.12663051166458,0,0,0,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0,0,0.10075209822764,0,0.773043412653187,0.818238361772504,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,1.31700342490351,0,0,0,0,0,0,1.15930404975077,0,0,0,0,1.58040879591855,0,0,0,0,2.81201501960331,5.20744597416465,0.992425680696705,0.0895585227028483,0,0.383382679165211,0,0,0.414656231081544,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0,1.01637849688985,0,0,0.335032530668698,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0.248107807818777,0,0,0.256278298511402,0.511707249066704,0,0,0,0,0,0,0,0,17.0430499757792,0,0,0,0,1.35359883872224,2.92658280996776,0.784349769176855,2.92278449306521,5.59423633132241,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0.650756789328606,0,0,0,0,1.95018073810956,0,0,0,0,0,0,0,0,0.623224249527161,0.991709492165869,2.49847087574638,3.57315594984836,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.384888450902048,1.34060455107157,2.17781969722645,0,8.6101074534246,6.73885902670502,3.10401107475673,12.8645104115897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,3.40963376167696,0.47748896947538,0,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0,0,1.94310496754094,0,0,9.61591357276397,0,0,0,0,0,0,0,0,0,1.13697999995054,0.724999575434793,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.468528891450678,0.182454789215666,0,0.242780379534093,0,0,0,0.189559738885464,0.150323419414493,0,2.65861549082874,0.661983911750998,0.941798755221676,0,0,0.277349346026277,0,0.0979923974143777,0.261177619741208,1.7472666824203,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0.0633107959558787,0.782205530939212,1.04206466326994,0.640358984218058,0,0,0,0,0,0,0,0.407712618220842,0,0.203996435272644,0,0,0.136905378891993,0,0,0,0.558564802544508,0.687481272035051,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0.160753148465019,0.275078873194468,0,0.899895566206002,3.86900977278975,0.121499113316049,0,0.0788057072991982,0.209818352539992,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,1.16354660725395,0.52893040697076,0,0,0,0.157204305099666,0,0,0,0,0,7.07223144380316,8.27276650274911,14.0918965311192,9.50830629058433,0,0,0,0,0,0.221858103073705,0.372578417648301,0.276697269872462,2.37462775128003,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0.150420656698515,0,0,0,0,66.3873827114533,0,0,0,0,0,0,0.496211178389294,0,3.57734797390867,0.535701835878287,0.336283722218824,0,0,0,0,1.02892805662451,0.0679697329768317,0,0,0.889851215136553,2.8257513426185,0,0,0,0,0,0.929195074296532,0.47404083519818,0,0,0,0,0,0,0,0,0,0.423387050190929,1.8328549483524,0.93061915699296,4.77769469488717,0,0.098150233615243,0.121917924982269,0,0.102662806856247,0,0,0,0.198950775161368,0,0,0,0,0.308696632431779,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.128915775947154,0,0,0.352894871715692,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,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| ||
|short_description=p@chr20:56283735..56283746,+ | |||
}} | }} |
Latest revision as of 15:43, 28 July 2015
Short description: | p@chr20:56283735..56283746, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:56283735..56283746, + |
Coexpression cluster: | C367_papillotubular_Macrophage_clear_pharyngeal_Renal_endometrial_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 7.78e-16 | 4 |
urothelial cell | 7.78e-16 | 4 |
respiratory epithelial cell | 1.85e-09 | 13 |
kidney tubule cell | 1.07e-08 | 10 |
nephron tubule epithelial cell | 1.07e-08 | 10 |
epithelial cell of nephron | 4.63e-08 | 15 |
kidney cell | 4.93e-07 | 17 |
kidney epithelial cell | 4.93e-07 | 17 |
epithelial cell | 6.94e-07 | 253 |
endo-epithelial cell | 9.03e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
urothelium | 2.25e-19 | 5 |
transitional epithelium | 4.34e-16 | 6 |
urinary system structure | 3.51e-12 | 47 |
renal system | 7.36e-12 | 48 |
excretory tube | 4.95e-10 | 16 |
kidney epithelium | 4.95e-10 | 16 |
nephron tubule epithelium | 1.07e-08 | 10 |
nephron epithelium | 4.63e-08 | 15 |
renal tubule | 4.63e-08 | 15 |
nephron tubule | 4.63e-08 | 15 |
nephron | 4.63e-08 | 15 |
uriniferous tubule | 4.63e-08 | 15 |
nephrogenic mesenchyme | 4.63e-08 | 15 |