FFCP PHASE1:Hg19::chr20:52790055..52790067,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:52790055..52790067,- to FFCP PHASE1:Hg19::chr20:52790055..52790067,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1591 | |EntrezGene=1591 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2602 | |HGNC=2602 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_ENST00000472970_5end | |||
|cluster_id=chr20:52790055..52790067,- | |||
|description=CAGE_peak_3_at_CYP24A1_5end | |||
|id=chr20:52790055..52790067,- | |||
|ontology_enrichment_celltype=CL:0002586!1.56e-09!3;CL:0000624!2.03e-07!6;CL:0000149!3.21e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;4.93e-21;3!CL:0000149;4.87e-16;4!CL:1000415;7.21e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,4.46e-21,3;CL:0000149,4.51e-16,4;CL:1000415,5.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.63e-13;5!UBERON:0008814;4.02e-09;2!UBERON:0010056;4.02e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;5.11e-17;1!DOID:3193;4.89e-09;2!DOID:962;4.89e-09;2!DOID:4929;7.21e-09;2!DOID:171;4.96e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,5.53e-17,1;DOID:3193,5.08e-09,2;DOID:962,5.08e-09,2;DOID:4929,6.94e-09,2;DOID:171,5.26e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001781!1.56e-09!3;UBERON:0001782!1.56e-09!3;UBERON:0005424!1.56e-09!3;UBERON:0005911!4.54e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001781;4.93e-21;3!UBERON:0001782;4.93e-21;3!UBERON:0004913;2.08e-16;1!UBERON:0003703;2.08e-16;1!UBERON:0001174;2.08e-16;1!UBERON:0004914;2.08e-16;1!UBERON:0002046;1.63e-13;5!UBERON:0000966;4.96e-13;5!UBERON:0005388;4.96e-13;5!UBERON:0001802;4.96e-13;5!UBERON:0002294;1.41e-09;7!UBERON:0001173;1.41e-09;7!UBERON:0006562;4.89e-09;2!UBERON:0003714;4.89e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001782,4.46e-21,3;UBERON:0005424,4.46e-21,3;UBERON:0004913,1.93e-16,1;UBERON:0003703,1.93e-16,1;UBERON:0001174,1.93e-16,1;UBERON:0004914,1.93e-16,1;UBERON:0001781,4.51e-16,4;UBERON:0002046,1.63e-13,5;UBERON:0004117,1.63e-13,5;UBERON:0007689,1.63e-13,5;UBERON:0007123,1.63e-13,5;UBERON:0003091,1.63e-13,5;UBERON:0000966,4.84e-11,6;UBERON:0005388,4.84e-11,6;UBERON:0001802,4.84e-11,6;UBERON:0003714,5.08e-09,2;UBERON:0008814,2.00e-08,18;UBERON:0002294,1.09e-07,9;UBERON:0001173,1.09e-07,9;UBERON:0004912,1.09e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,1.28225062558195,0.656029291399411,1.62689197332152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,2.04123229368278,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,1.75996244461323,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.247247575143499,0.404421263125109,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39521573038061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.926404341482917,0,0,0.38582807654183,0,0,0,0.607719912354764,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.33946505990805,0,0,2.23457967189298,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,3.00366731990879,0,0,0,0,0.40341013740704,0,0,4.09429793775242,1.33070477595341,0,0,0,0,0,0,0,1.23109871051734,2.6830109804315,0,0,0,0,0.0887023701626388,0,0,0,0,0.590969204419841,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70953822838576,0.0636471582781649,0,0,0,0.134704106029175,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,1.28225062558195,0.656029291399411,1.62689197332152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,2.04123229368278,0,0,0.361789315876224,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,1.75996244461323,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.247247575143499,0.404421263125109,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39521573038061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0.926404341482917,0,0,0.38582807654183,0,0,0,0.607719912354764,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.33946505990805,0,0,2.23457967189298,0,0,0,0,0,0.192687675289379,0,0,0,0,0,0,0,0,0,0,3.00366731990879,0,0,0,0,0.40341013740704,0,0,4.09429793775242,1.33070477595341,0,0,0,0,0,0,0,1.23109871051734,2.6830109804315,0,0,0,0,0.0887023701626388,0,0,0,0,0.590969204419841,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70953822838576,0.0636471582781649,0,0,0,0.134704106029175,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@CYP24A1 | |||
}} | }} |
Latest revision as of 02:30, 17 September 2015
Short description: | p3@CYP24A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYP24A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000472970_5end |
EntrezGene: | CYP24A1 |
HGNC: | 2602 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 4.46e-21 | 3 |
visual pigment cell | 4.51e-16 | 4 |
epithelial cell of gall bladder | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pigmented layer of retina | 4.46e-21 | 3 |
presumptive retinal pigmented epithelium | 4.46e-21 | 3 |
hepatopancreatic ampulla | 1.93e-16 | 1 |
extrahepatic bile duct | 1.93e-16 | 1 |
common bile duct | 1.93e-16 | 1 |
duodenal papilla | 1.93e-16 | 1 |
layer of retina | 4.51e-16 | 4 |
thyroid gland | 1.63e-13 | 5 |
pharyngeal pouch | 1.63e-13 | 5 |
thyroid diverticulum | 1.63e-13 | 5 |
pharyngeal pouch 2 | 1.63e-13 | 5 |
thyroid primordium | 1.63e-13 | 5 |
retina | 4.84e-11 | 6 |
photoreceptor array | 4.84e-11 | 6 |
posterior segment of eyeball | 4.84e-11 | 6 |
neural tissue | 5.08e-09 | 2 |
pharyngeal arch system | 2.00e-08 | 18 |
biliary system | 1.09e-07 | 9 |
biliary tree | 1.09e-07 | 9 |
biliary bud | 1.09e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 5.53e-17 | 1 |
peripheral nerve sheath neoplasm | 5.08e-09 | 2 |
neurofibroma | 5.08e-09 | 2 |
tubular adenocarcinoma | 6.94e-09 | 2 |
neuroectodermal tumor | 5.26e-07 | 10 |