FFCP PHASE1:Hg19::chr20:49547731..49547753,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:49547731..49547753,- to FFCP PHASE1:Hg19::chr20:49547731..49547753,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23394 | |EntrezGene=23394 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15766 | |HGNC=15766 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2P0 | |UniProt=Q9H2P0 | ||
|association_with_transcript=0bp_to_ENST00000396029_5end | |||
|cluster_id=chr20:49547731..49547753,- | |||
|description=CAGE_peak_4_at_ADNP_5end | |||
|id=chr20:49547731..49547753,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!2.50e-07!143;DOID:162!9.31e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.93e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.45e-17!82;UBERON:0005743!9.01e-17!86;UBERON:0000073!1.63e-16!94;UBERON:0001016!1.63e-16!94;UBERON:0001049!2.96e-13!57;UBERON:0005068!2.96e-13!57;UBERON:0006241!2.96e-13!57;UBERON:0007135!2.96e-13!57;UBERON:0000955!1.74e-12!69;UBERON:0006238!1.74e-12!69;UBERON:0002346!4.18e-11!90;UBERON:0003080!7.82e-11!42;UBERON:0002616!9.37e-11!59;UBERON:0002780!1.84e-10!41;UBERON:0001890!1.84e-10!41;UBERON:0006240!1.84e-10!41;UBERON:0003075!2.84e-10!86;UBERON:0007284!2.84e-10!86;UBERON:0000924!1.55e-09!173;UBERON:0006601!1.55e-09!173;UBERON:0000153!4.43e-09!129;UBERON:0007811!4.43e-09!129;UBERON:0004121!7.64e-09!169;UBERON:0002020!1.22e-08!34;UBERON:0003528!1.22e-08!34;UBERON:0003056!1.28e-08!61;UBERON:0007023!1.44e-08!115;UBERON:0001893!1.82e-08!34;UBERON:0002791!2.42e-08!33;UBERON:0001869!2.51e-08!32;UBERON:0000033!3.22e-08!123;UBERON:0000956!1.58e-07!25;UBERON:0000203!1.58e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.76e-07;25!UBERON:0000203;1.76e-07;25!UBERON:0002780;1.76e-07;41!UBERON:0001890;1.76e-07;41!UBERON:0001893;2.57e-07;34!UBERON:0001869;2.73e-07;32!UBERON:0002791;3.46e-07;32!UBERON:0000073;3.82e-07;53!UBERON:0002616;3.82e-07;53!UBERON:0003528;6.16e-07;34!UBERON:0002020;6.16e-07;34!UBERON:0000955;8.98e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.73e-17,81;UBERON:0001016,1.42e-16,89;UBERON:0001049,2.63e-13,56;UBERON:0005068,2.63e-13,56;UBERON:0006241,2.63e-13,56;UBERON:0007135,2.63e-13,56;UBERON:0000073,3.56e-12,53;UBERON:0002616,3.56e-12,53;UBERON:0000955,4.16e-12,68;UBERON:0006238,4.16e-12,68;UBERON:0011216,2.19e-11,223;UBERON:0002780,8.48e-11,41;UBERON:0001890,8.48e-11,41;UBERON:0003080,8.48e-11,41;UBERON:0006240,8.48e-11,41;UBERON:0002346,1.49e-10,86;UBERON:0003075,1.04e-09,82;UBERON:0007284,1.04e-09,82;UBERON:0003528,6.53e-09,34;UBERON:0002020,6.53e-09,34;UBERON:0004121,9.87e-09,171;UBERON:0000924,9.87e-09,171;UBERON:0006601,9.87e-09,171;UBERON:0001893,9.91e-09,34;UBERON:0001869,1.38e-08,32;UBERON:0007023,1.42e-08,114;UBERON:0003056,1.52e-08,61;UBERON:0002791,2.86e-08,32;UBERON:0000956,5.95e-08,25;UBERON:0000203,5.95e-08,25;UBERON:0010371,3.84e-07,104;UBERON:0002619,6.53e-07,22 | |||
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| ||
|short_description=p4@ADNP | |||
}} | }} |
Latest revision as of 22:41, 16 September 2015
Short description: | p4@ADNP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ADNP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396029_5end |
EntrezGene: | ADNP |
HGNC: | 15766 |
UniProt: | Q9H2P0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.73e-17 | 81 |
nervous system | 1.42e-16 | 89 |
neural tube | 2.63e-13 | 56 |
neural rod | 2.63e-13 | 56 |
future spinal cord | 2.63e-13 | 56 |
neural keel | 2.63e-13 | 56 |
regional part of nervous system | 3.56e-12 | 53 |
regional part of brain | 3.56e-12 | 53 |
brain | 4.16e-12 | 68 |
future brain | 4.16e-12 | 68 |
organ system subdivision | 2.19e-11 | 223 |
regional part of forebrain | 8.48e-11 | 41 |
forebrain | 8.48e-11 | 41 |
anterior neural tube | 8.48e-11 | 41 |
future forebrain | 8.48e-11 | 41 |
neurectoderm | 1.49e-10 | 86 |
neural plate | 1.04e-09 | 82 |
presumptive neural plate | 1.04e-09 | 82 |
brain grey matter | 6.53e-09 | 34 |
gray matter | 6.53e-09 | 34 |
ectoderm-derived structure | 9.87e-09 | 171 |
ectoderm | 9.87e-09 | 171 |
presumptive ectoderm | 9.87e-09 | 171 |
telencephalon | 9.91e-09 | 34 |
cerebral hemisphere | 1.38e-08 | 32 |
adult organism | 1.42e-08 | 114 |
pre-chordal neural plate | 1.52e-08 | 61 |
regional part of telencephalon | 2.86e-08 | 32 |
cerebral cortex | 5.95e-08 | 25 |
pallium | 5.95e-08 | 25 |
ecto-epithelium | 3.84e-07 | 104 |
regional part of cerebral cortex | 6.53e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.93e-07 | 143 |