FFCP PHASE1:Hg19::chr20:45179283..45179298,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=128506 | |EntrezGene=128506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16116 | |HGNC=16116 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BR26 | |UniProt=Q9BR26 | ||
|association_with_transcript=-70bp_to_ENST00000279028,NM_080721,uc010zxu.1_5end | |||
|cluster_id=chr20:45179283..45179298,- | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_1_at_C20orf123_5end | |||
|id=chr20:45179283..45179298,- | |||
|ontology_enrichment_celltype=CL:0000763!3.95e-31!112;CL:0000049!3.95e-31!112;CL:0002009!2.34e-26!65;CL:0000557!1.06e-23!71;CL:0002032!3.27e-23!165;CL:0000837!3.27e-23!165;CL:0002194!4.23e-22!63;CL:0000576!4.23e-22!63;CL:0000040!4.23e-22!63;CL:0000559!4.23e-22!63;CL:0000037!6.04e-22!172;CL:0000566!6.04e-22!172;CL:0000988!2.64e-20!182;CL:0000839!1.97e-19!70;CL:0000840!1.04e-18!5;CL:0001029!1.04e-18!5;CL:0000766!1.55e-17!76;CL:0000235!1.14e-15!10;CL:0002031!2.90e-15!124;CL:0002087!3.71e-13!119;CL:0000738!7.43e-13!140;CL:0000990!2.31e-12!8;CL:0000451!4.76e-10!10;CL:0001014!6.19e-10!2;CL:0001016!6.19e-10!2;CL:0000134!1.65e-08!358;CL:0002320!3.46e-08!365;CL:0002057!4.19e-08!42;CL:0000860!1.93e-07!45;CL:0000034!4.63e-07!444;CL:0000219!4.68e-07!390;CL:0000048!6.01e-07!430;CL:0000723!9.85e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.61e-55;6!CL:0000840;1.27e-38;5!CL:0000990;9.36e-26;8!CL:0000473;1.69e-21;39!CL:0000234;1.69e-21;39!CL:0000451;4.57e-21;10!CL:0001014;2.17e-19;2!CL:0001016;2.17e-19;2!CL:0000453;2.63e-08;5!CL:0000766;2.62e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,4.83e-55,6;CL:0000840,1.27e-38,5;CL:0001029,1.27e-38,5;CL:0002009,4.46e-35,61;CL:0000557,9.24e-32,67;CL:0002194,1.67e-27,59;CL:0000576,1.67e-27,59;CL:0000040,1.67e-27,59;CL:0000559,1.67e-27,59;CL:0000763,2.77e-27,108;CL:0000049,2.77e-27,108;CL:0000990,9.36e-26,8;CL:0000839,2.15e-24,66;CL:0000766,3.34e-22,72;CL:0000473,3.90e-21,48;CL:0000234,3.90e-21,48;CL:0000451,4.57e-21,10;CL:0001014,2.17e-19,2;CL:0001016,2.17e-19,2;CL:0002032,2.12e-17,161;CL:0000837,2.12e-17,161;CL:0002031,1.03e-16,120;CL:0000037,1.48e-16,168;CL:0000988,1.45e-15,177;CL:0000738,1.88e-14,136;CL:0002087,4.09e-13,115;CL:0000453,2.63e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000049;2.72e-07;108 | |||
|ontology_enrichment_disease=DOID:8692!2.38e-11!31;DOID:2531!1.34e-10!51;DOID:0060083!1.34e-10!51;DOID:1240!1.93e-10!39;DOID:74!4.53e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:9119;3.78e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,3.01e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.85e-20!80;UBERON:0001474!1.13e-18!86;UBERON:0004765!1.04e-16!101;UBERON:0001434!1.04e-16!101;UBERON:0002390!6.17e-15!102;UBERON:0003061!6.17e-15!102;UBERON:0002193!1.61e-14!112;UBERON:0002405!5.30e-14!115;UBERON:0002204!5.73e-10!167;UBERON:0002384!1.81e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.43e-28,76;UBERON:0001474,1.46e-25,82;UBERON:0004765,4.36e-23,90;UBERON:0002405,2.88e-22,93;UBERON:0002390,5.18e-21,98;UBERON:0003061,5.18e-21,98;UBERON:0001434,1.52e-20,100;UBERON:0002193,7.62e-19,108;UBERON:0002204,1.05e-14,167;UBERON:0003081,1.37e-11,203 | |||
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| ||
|short_description=p1@C20orf123 | |||
}} | }} |
Latest revision as of 15:03, 16 September 2015
Short description: | p1@C20orf123 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C20orf123_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -70bp_to_ENST00000279028, NM_080721, uc010zxu.1_5end |
EntrezGene: | C20orf123 |
HGNC: | 16116 |
UniProt: | Q9BR26 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 4.83e-55 | 6 |
immature conventional dendritic cell | 1.27e-38 | 5 |
common dendritic progenitor | 1.27e-38 | 5 |
macrophage dendritic cell progenitor | 4.46e-35 | 61 |
granulocyte monocyte progenitor cell | 9.24e-32 | 67 |
monopoietic cell | 1.67e-27 | 59 |
monocyte | 1.67e-27 | 59 |
monoblast | 1.67e-27 | 59 |
promonocyte | 1.67e-27 | 59 |
myeloid cell | 2.77e-27 | 108 |
common myeloid progenitor | 2.77e-27 | 108 |
conventional dendritic cell | 9.36e-26 | 8 |
myeloid lineage restricted progenitor cell | 2.15e-24 | 66 |
myeloid leukocyte | 3.34e-22 | 72 |
defensive cell | 3.90e-21 | 48 |
phagocyte | 3.90e-21 | 48 |
dendritic cell | 4.57e-21 | 10 |
CD1a-positive Langerhans cell | 2.17e-19 | 2 |
immature CD1a-positive Langerhans cell | 2.17e-19 | 2 |
hematopoietic oligopotent progenitor cell | 2.12e-17 | 161 |
hematopoietic multipotent progenitor cell | 2.12e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 1.03e-16 | 120 |
hematopoietic stem cell | 1.48e-16 | 168 |
hematopoietic cell | 1.45e-15 | 177 |
leukocyte | 1.88e-14 | 136 |
nongranular leukocyte | 4.09e-13 | 115 |
Langerhans cell | 2.63e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.43e-28 | 76 |
bone element | 1.46e-25 | 82 |
skeletal element | 4.36e-23 | 90 |
immune system | 2.88e-22 | 93 |
hematopoietic system | 5.18e-21 | 98 |
blood island | 5.18e-21 | 98 |
skeletal system | 1.52e-20 | 100 |
hemolymphoid system | 7.62e-19 | 108 |
musculoskeletal system | 1.05e-14 | 167 |
lateral plate mesoderm | 1.37e-11 | 203 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 3.01e-10 | 1 |