FFCP PHASE1:Hg19::chr20:30277227..30277231,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr20:30277227..30277231,- to FFCP PHASE1:Hg19::chr20:30277227..30277231,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:30277227..30277231,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_at_chr20:30277227..30277231,- | |||
|id=chr20:30277227..30277231,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000322;8.73e-08;3!CL:0000313;7.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.77e-08,3;CL:0000313,7.77e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.80e-12;4!UBERON:0007284;3.80e-12;4!UBERON:0001041;1.40e-07;30!UBERON:0003104;5.31e-07;31 | |||
|ontology_enrichment_disease=DOID:0050687!3.58e-12!143;DOID:305!4.60e-10!106;DOID:162!8.19e-10!235;DOID:14566!1.13e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.94e-11;2!DOID:3908;4.70e-10;5!DOID:0050615;6.09e-08;16!DOID:2152;7.12e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.97e-11,2;DOID:3908,4.81e-10,5;DOID:0050615,7.74e-08,16;DOID:2152,7.77e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.09e-09!115;UBERON:0002346!2.94e-09!90;UBERON:0003075!3.65e-09!86;UBERON:0007284!3.65e-09!86;UBERON:0001049!8.19e-09!57;UBERON:0005068!8.19e-09!57;UBERON:0006241!8.19e-09!57;UBERON:0007135!8.19e-09!57;UBERON:0000955!2.91e-08!69;UBERON:0006238!2.91e-08!69;UBERON:0002780!1.17e-07!41;UBERON:0001890!1.17e-07!41;UBERON:0006240!1.17e-07!41;UBERON:0001017!2.48e-07!82;UBERON:0003080!3.08e-07!42;UBERON:0002020!5.28e-07!34;UBERON:0003528!5.28e-07!34;UBERON:0002616!6.69e-07!59;UBERON:0000073!6.84e-07!94;UBERON:0001016!6.84e-07!94;UBERON:0005743!8.03e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;5.11e-16;3!UBERON:0000946;5.11e-16;3!UBERON:0004903;2.94e-11;2!UBERON:0002133;2.94e-11;2!UBERON:0002173;2.94e-11;2!UBERON:0002186;2.94e-11;2!UBERON:0000058;2.18e-08;10!UBERON:0004821;8.73e-08;3!UBERON:0007499;8.73e-08;3!UBERON:0003215;8.73e-08;3!UBERON:0010368;8.73e-08;3!UBERON:0009911;8.73e-08;3!UBERON:0002299;8.73e-08;3!UBERON:0006524;8.73e-08;3!UBERON:0008874;8.73e-08;3!UBERON:0002169;8.73e-08;3!UBERON:0004894;8.73e-08;3!UBERON:0004911;7.12e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,3.89e-16,3;UBERON:0009751,3.89e-16,3;UBERON:0000946,3.89e-16,3;UBERON:0002523,3.89e-16,3;UBERON:0005983,3.89e-16,3;UBERON:0002165,3.89e-16,3;UBERON:0002062,3.89e-16,3;UBERON:0007280,3.89e-16,3;UBERON:0004903,2.97e-11,2;UBERON:0002173,2.97e-11,2;UBERON:0002186,2.97e-11,2;UBERON:0002133,4.05e-11,2;UBERON:0004821,8.77e-08,3;UBERON:0003215,8.77e-08,3;UBERON:0010368,8.77e-08,3;UBERON:0009911,8.77e-08,3;UBERON:0002299,8.77e-08,3;UBERON:0006524,8.77e-08,3;UBERON:0008874,8.77e-08,3;UBERON:0002169,8.77e-08,3;UBERON:0004894,8.77e-08,3;UBERON:0005157,2.75e-07,47;UBERON:0004797,3.49e-07,7;UBERON:0004911,7.77e-07,1 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.410623275218653,0.251085279189606,0.382067028739756,0.246301768349837,0.472264687882075,0,0,0.154816123316076,0,0,0,0.542270404062111,0.284338464974843,0,0,0.601633342410425,0.217010870715852,0.223915474239924,0,0.515151135268373,0,0,0,0.232429036905685,0,0,0.28769239232215,0.512321413058201,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0.56738522469114,0.622822248995575,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0.390178042679635,0.164437904603676,0,0.579606171470105,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0.649094787309367,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0,0.267899184852239,0.44905874525234,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.561803226808994,0.816616685019573,0.61417158655884,0.103325781175765,0,0,0,0,0,0.625592599359821,0.554128230968366,0,0.30648779579902,0.300476117813194,0,0.538168907066586,0,0,0,0,0.515281080091258,0.18611685633159,0.337552664482532,0.0974370051611986,0,0.184099797284599,0,0,0.10075209822764,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,1.8448265781467,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0.738651018262192,0,0.148631162288728,0,0,0,0.179117045405697,0,0,17.243213326358,0.176096868026452,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0.26593811658487,0,0.514414748524284,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0.207970861530807,0,0,0.234282829985426,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0,0.213455115606889,0,0,0,0,0.306923946576125,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0.200506470303285,0.368323955743585,0,0.364182336013434,0.262248829918848,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0.438519753291869,0.261435451024901,0,0,0,0.206082023295445,0.457847324091717,0.082509499920588,0,0,0,0,0.308097234229289,0.307007349452259,0.275673144969061,0.537101224341368,0,0.255679882248303,0,0,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0.764637207142375,0,0,0,0.648473311192717,0,0,0.213648142254946,2.88743956579008,1.22520107990516,0.743212700502875,0,0.284567373393656,0.159426272728822,0.59873811429845,0,0.635020748171649,0,0,0.228234679033192,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0.166849141711909,0,0.556812347790485,6.15436994738562,0,0,4.22961015263549,0.37428108081644,0.879049075631364,0.121360521749513,0,1.13654458722565,0,0,0,0,0.844016498463076,0.222617410045812,0,0,0.398495976502139,0.552567831062295,0.755798243562828,0.102268682502155,0.369254416383208,0.311039587661807,1.07842021376792,1.61119057208048,0,0,0,0,0.969332746095218,0.463840490809256,0,0.520855522170466,0.699679999969566,0,0.227586896570999,1.5255219017566,0.236387681767936,0.344743373241465,0,0.520874984799877,0,0.482385754501632,0,1.99042667876204,0.886642856860642,0.219385397153973,0,0.557694977114413,0.153900517007594,0.113942055847001,0.46112780877612,0.179515288819544,0.325942115766024,0,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0.19606253431774,1.00692952185506,0,0,0.421996129056054,0.163232808159148,0.706765357169704,0,0,0.265372693510018,0.611030144933625,0.889563386041866,0.247127877893006,0.730953646538188,1.07841812769083,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0.442306057399416,0,0,0.664653872707185,0.661983911750998,1.88359751044335,1.19472429772959,1.70765727617876,0.554698692052555,0.173559738335131,0.195984794828755,0.870592065804026,0.17472666824203,0.859930162358083,0.290268993867255,0.219267951258557,0.410577285266046,0,0.529536760149002,0,0.274083849293502,0,0.379864775735272,0.977756913674015,0,0.213452994739353,0,0.864542502924636,0,0,0.14405479798815,0.49701014226173,0.942776138467182,0.407712618220842,0.836822770498666,0,0,0.600420288709789,1.23214841002794,0,0,0.262887354279314,1.11712960508902,1.83328339209347,1.43574604915363,0,0,0,0.403100834920358,0,0,0.945398187686684,0.576911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| 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| ||
|short_description=p@chr20:30277227..30277231,- | |||
}} | }} |
Latest revision as of 12:50, 28 July 2015
Short description: | p@chr20:30277227..30277231, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:30277227..30277231, - |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.77e-08 | 3 |
serous secreting cell | 7.77e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
valve | 3.89e-16 | 3 |
cardiac mesenchyme | 3.89e-16 | 3 |
cardial valve | 3.89e-16 | 3 |
tunica intima | 3.89e-16 | 3 |
heart layer | 3.89e-16 | 3 |
endocardium | 3.89e-16 | 3 |
endocardial cushion | 3.89e-16 | 3 |
presumptive endocardium | 3.89e-16 | 3 |
bronchoalveolar duct junction | 2.97e-11 | 2 |
alveolar duct | 2.97e-11 | 2 |
bronchiole | 2.97e-11 | 2 |
atrioventricular valve | 4.05e-11 | 2 |
pulmonary alveolus epithelium | 8.77e-08 | 3 |
alveolus | 8.77e-08 | 3 |
pulmonary lobule | 8.77e-08 | 3 |
lobule | 8.77e-08 | 3 |
alveolus of lung | 8.77e-08 | 3 |
alveolar system | 8.77e-08 | 3 |
pulmonary acinus | 8.77e-08 | 3 |
alveolar sac | 8.77e-08 | 3 |
alveolar wall | 8.77e-08 | 3 |
epithelial fold | 2.75e-07 | 47 |
blood vessel layer | 3.49e-07 | 7 |
epithelium of female gonad | 7.77e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.97e-11 | 2 |
non-small cell lung carcinoma | 4.81e-10 | 5 |
respiratory system cancer | 7.74e-08 | 16 |
ovary epithelial cancer | 7.77e-07 | 1 |