FFCP PHASE1:Hg19::chr1:89738560..89738575,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:89738560..89738575,- to FFCP PHASE1:Hg19::chr1:89738560..89738575,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115362 | |EntrezGene=115362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19895 | |HGNC=19895 | ||
|TSSclassifier=strong | |||
|UniProt=Q96PP8 | |UniProt=Q96PP8 | ||
|association_with_transcript=-16bp_to_ENST00000343435,NM_001134486,NM_052942,uc001dnc.2,uc001dnd.2_5end | |||
|cluster_id=chr1:89738560..89738575,- | |||
|coexpression_cluster_id=C451 | |||
|description=CAGE_peak_2_at_GBP5_5end | |||
|id=chr1:89738560..89738575,- | |||
|ontology_enrichment_celltype=CL:0000037!5.63e-51!172;CL:0000566!5.63e-51!172;CL:0002032!1.31e-49!165;CL:0000837!1.31e-49!165;CL:0000738!4.30e-46!140;CL:0000988!4.61e-46!182;CL:0002087!5.86e-45!119;CL:0002031!1.16e-39!124;CL:0000763!1.66e-31!112;CL:0000049!1.66e-31!112;CL:0000766!1.37e-30!76;CL:0002194!1.18e-26!63;CL:0000576!1.18e-26!63;CL:0000040!1.18e-26!63;CL:0000559!1.18e-26!63;CL:0002009!5.03e-25!65;CL:0000557!3.03e-24!71;CL:0002057!6.25e-24!42;CL:0000839!8.45e-24!70;CL:0000860!5.46e-21!45;CL:0000838!2.06e-16!52;CL:0000542!9.45e-16!53;CL:0000051!9.45e-16!53;CL:0000791!1.72e-14!18;CL:0000789!1.72e-14!18;CL:0002420!1.72e-14!18;CL:0002419!1.72e-14!18;CL:0000790!1.72e-14!18;CL:0000084!2.75e-13!25;CL:0000827!2.75e-13!25;CL:0000134!4.61e-13!358;CL:0002320!8.18e-12!365;CL:0000219!4.55e-10!390;CL:0000625!1.03e-09!11;CL:0000094!7.44e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000576;2.07e-22;48!CL:0000860;5.79e-22;33!CL:0002057;5.79e-22;33!CL:0000473;1.12e-20;39!CL:0000234;1.12e-20;39!CL:0000791;7.34e-19;18!CL:0000789;7.34e-19;18!CL:0002419;7.34e-19;18!CL:0000084;4.47e-18;25!CL:0002087;1.49e-16;104!CL:0000766;4.45e-16;69!CL:0000763;4.67e-14;100!CL:0000738;1.15e-12;136!CL:0000625;1.79e-12;11!CL:0000542;5.77e-12;53!CL:0000988;2.42e-11;177!CL:0000094;1.17e-08;8!CL:0000236;1.72e-07;13!CL:0000624;5.09e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.69e-62,168;CL:0002032,6.26e-61,161;CL:0000837,6.26e-61,161;CL:0002087,2.96e-59,115;CL:0000738,6.19e-57,136;CL:0000988,6.92e-57,177;CL:0002031,1.82e-50,120;CL:0000766,6.89e-39,72;CL:0000763,4.36e-38,108;CL:0000049,4.36e-38,108;CL:0002194,3.46e-36,59;CL:0000576,3.46e-36,59;CL:0000040,3.46e-36,59;CL:0000559,3.46e-36,59;CL:0002009,2.43e-34,61;CL:0000473,7.31e-33,48;CL:0000234,7.31e-33,48;CL:0000557,7.96e-31,67;CL:0000860,2.76e-30,42;CL:0002057,2.76e-30,42;CL:0000839,3.13e-30,66;CL:0000838,2.98e-20,52;CL:0000542,1.34e-19,53;CL:0000051,1.34e-19,53;CL:0000791,7.34e-19,18;CL:0000789,7.34e-19,18;CL:0002420,7.34e-19,18;CL:0002419,7.34e-19,18;CL:0000790,7.34e-19,18;CL:0000134,1.26e-18,354;CL:0000084,4.82e-18,25;CL:0000827,4.82e-18,25;CL:0002320,1.82e-17,361;CL:0000219,2.73e-14,386;CL:0000625,1.83e-12,11;CL:0000048,1.37e-09,427;CL:0000034,4.25e-09,441;CL:0000723,5.69e-09,433;CL:0000094,1.19e-08,8;CL:0000236,3.12e-08,14;CL:0002393,2.72e-07,9;CL:0002397,2.72e-07,9;CL:0000624,4.97e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-21;42!CL:0000790;7.34e-19;18!CL:0000049;1.80e-12;108!CL:0000051;5.77e-12;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.43e-07,39;DOID:8692,6.38e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.48e-28!102;UBERON:0003061!1.48e-28!102;UBERON:0002193!6.34e-25!112;UBERON:0002371!1.64e-19!80;UBERON:0001474!2.14e-16!86;UBERON:0002405!2.96e-14!115;UBERON:0004765!1.42e-13!101;UBERON:0001434!1.42e-13!101;UBERON:0002384!4.05e-11!375;UBERON:0007023!2.14e-10!115;UBERON:0000178!5.50e-08!15;UBERON:0000179!5.50e-08!15;UBERON:0000463!5.50e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.06e-09;15!UBERON:0000179;7.06e-09;15!UBERON:0000463;7.06e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.11e-37,98;UBERON:0003061,3.11e-37,98;UBERON:0002193,9.27e-34,108;UBERON:0002405,5.24e-26,93;UBERON:0002371,6.27e-26,76;UBERON:0001474,1.34e-22,82;UBERON:0004765,6.60e-19,90;UBERON:0002384,8.67e-17,371;UBERON:0001434,1.20e-16,100;UBERON:0000178,7.15e-09,15;UBERON:0000179,7.15e-09,15;UBERON:0000463,7.15e-09,15;UBERON:0003081,2.02e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0.123121058076788,0,0.626909442956176,1.71741592278634,0.684372125364421,0.251085279189606,0.61130724598361,0.656804715599566,0.550975469195755,7.86728553697808,27.2518872649021,5.72819656269481,0,0,0,0,0,3.52320527201817,4.43196326825502,8.42286679374595,8.24641308720237,16.7936605679943,19.4336199611388,21.1211965460033,2.18097358169347,0.755751887377619,2.91100873425379,4.64858073811369,2.05583944010913,2.47765096716083,90.3354111891552,86.0699973937778,113.274988116632,12.0660988257816,1.29096936716765,6.77132432971709,4.89430082810772,2.18324920046277,4.71919317334678,16.2224462956578,8.66508373105453,8.31138263538754,111.159888162923,73.4026260047605,80.9827026012119,34.2446901581729,20.425868088881,23.0444232128363,73.1133615897123,51.1053260051797,105.988156216097,39.350967671169,27.9891003350549,38.291948880347,8.23895616616573,6.16552469898626,9.43463904787692,5.05478840159228,4.95583746376971,9.96498637521897,12.2555479808737,9.54800050555633,12.7864907635244,17.5996244461323,17.4764355603882,9.7846017924991,16.2157484575273,11.6114836240444,17.2425731986345,19.8313461835459,8.58648379081828,12.5226853204079,9.39579502993502,4.96955196562797,1.32171328579026,3.36305137788922,1.05353633910031,26.7525287354813,15.3274197472174,17.8873304129573,58.180900395956,49.5401845283057,44.5040937390649,44.8101475338196,36.7654507721073,48.0207629183985,54.0542702784036,85.0324132222149,41.7577702305701,44.7404155605981,37.3274043450345,38.6890024900188,58.8300264042157,22.9844172901194,19.7980212786388,18.8163942848958,42.6043128542849,39.8549313345998,52.918626604325,53.6401747081346,74.5443069518386,63.806178477929,72.2343553780764,52.7012916772205,56.5700821302529,67.4625923382668,57.0633177426081,45.9831678275786,24.9992361598668,18.1859333132785,13.7583183688659,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.175669571386252,2.68507104770311,0,0,6.16640047943898,10.7960437125546,6.51494006542439,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.2163210564583,89.1894607541148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587172493218824,0.161872944368132,0.280901613404497,0,0.122834317311768,0,19.0080457165129,1.7308685049499,0,0,0,0.250237039743928,0,1.75591048352335,0.30648779579902,3.30523729594513,0.226864366320042,6.81680615617675,2.34913127700424,1.05965950579781,8.70264178644767,2.16410311400722,1.28820270022815,0,2.70042131586026,1.46155507741798,5.04867548488229,0.736399189138395,0,2.13005755509969,2.51880245569101,0.339121184620975,0,0.545492241181669,0,0,0,0,0,0,0,9.38697193978896,0.643240938192885,2.76269842704961,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40164215827233,1.17002132569619,2.0808362720422,0,0,0.283550194484773,0,0,0,0.492663237895943,0,0,0.432359860250884,0.6312121671319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,4.01805673145701,4.21667878966063,0,0,0,0,0,0,41.023162701631,27.7813371884717,15.0939302401662,17.5829959703255,0.76228387266739,0,0,0.167516265334349,0,44.1914144128838,47.865833472644,48.0721995585801,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,20.6768026122887,18.7671354712197,16.4360439017304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.340906509664404,0,0,0,0,0,0.464845549297286,0,0,1.54016790088044,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92456187557541,0,0,0,0,0,0,0.876901770507525,0,0,0.202910376962704,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,2.44773882019626,0,0,0,0,36.5362278647162,28.2915766642679,22.2162402997923,30.2554354831392,36.1998800315851,38.2599253603703,27.5416032991439,19.8281294073568,0,0,0,0,0,0,4.3045093636782,1.99579371432817,12.0648383183391,18.8389488624256,0,8.98550969963068,0,0,15.038068625404,6.60237933426253,0,0,1.70338495076131,14.0837191349864,4.30137070031841,6.71028323677248,5.50602167649298,8.79246429309181,10.5794346080192,7.38524393686274,2.97501246323581,24.9803975998365,9.86909035614947,0,1.31857361344705,0,32.4300248247462,0,0,0.593929361665277,0,0,0.562677665642051,1.33570446027487,0,0,0.796991953004279,11.0513566212459,0,1.53403023753232,0.246169610922139,0.311039587661807,0,0,0,1.57829449019094,31.1328020051022,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.723578631752448,0,0,0,0.219385397153973,0,0,1.15425387755696,0.797594390929008,0,0.0897576444097721,0,0,0,0,8.17546385565892,10.5176771784667,0,0.451191321234361,0.19606253431774,0.335643173951685,0.37950746544837,6.19852658023477,0,0.163232808159148,0,0,0.995261931078505,2.29989667708682,0,0.296521128680622,0,0.104421949505455,0.808813595768125,0.802577647298789,0.468528891450678,0,0,0,0,1.20990716048664,0,5.05492637027904,1.05226393590145,0,0,0,0,0,0,0.277349346026277,3.8183142433728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| ||
|short_description=p2@GBP5 | |||
}} | }} |
Latest revision as of 17:01, 19 September 2015
Short description: | p2@GBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GBP5_5end |
Coexpression cluster: | C451_CD14_CD4_Eosinophils_Neutrophils_adult_Natural_CD8 |
Association with transcript: | -16bp_to_ENST00000343435, NM_001134486, NM_052942, uc001dnc.2, uc001dnd.2_5end |
EntrezGene: | GBP5 |
HGNC: | 19895 |
UniProt: | Q96PP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.11e-37 | 98 |
blood island | 3.11e-37 | 98 |
hemolymphoid system | 9.27e-34 | 108 |
immune system | 5.24e-26 | 93 |
bone marrow | 6.27e-26 | 76 |
bone element | 1.34e-22 | 82 |
skeletal element | 6.60e-19 | 90 |
connective tissue | 8.67e-17 | 371 |
skeletal system | 1.20e-16 | 100 |
blood | 7.15e-09 | 15 |
haemolymphatic fluid | 7.15e-09 | 15 |
organism substance | 7.15e-09 | 15 |
lateral plate mesoderm | 2.02e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.43e-07 | 39 |
myeloid leukemia | 6.38e-07 | 31 |