FFCP PHASE1:Hg19::chr1:6673782..6673830,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:6673782..6673830,+ to FFCP PHASE1:Hg19::chr1:6673782..6673830,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=148479 | |EntrezGene=148479 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22983 | |HGNC=22983 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495385_5end | |||
|cluster_id=chr1:6673782..6673830,+ | |||
|description=CAGE_peak_1_at_PHF13_5end | |||
|id=chr1:6673782..6673830,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!2.16e-10!194;UBERON:0004111!1.48e-09!241;UBERON:0002346!2.24e-09!90;UBERON:0001017!2.89e-09!82;UBERON:0000119!4.93e-09!312;UBERON:0001049!5.57e-09!57;UBERON:0005068!5.57e-09!57;UBERON:0006241!5.57e-09!57;UBERON:0007135!5.57e-09!57;UBERON:0003075!1.03e-08!86;UBERON:0007284!1.03e-08!86;UBERON:0000483!1.16e-08!309;UBERON:0005743!1.35e-08!86;UBERON:0000073!3.70e-08!94;UBERON:0001016!3.70e-08!94;UBERON:0000955!4.40e-08!69;UBERON:0006238!4.40e-08!69;UBERON:0002616!4.55e-08!59;UBERON:0000477!6.36e-08!286;UBERON:0000924!6.91e-08!173;UBERON:0006601!6.91e-08!173;UBERON:0003080!1.73e-07!42;UBERON:0002020!2.32e-07!34;UBERON:0003528!2.32e-07!34;UBERON:0004121!2.46e-07!169;UBERON:0000475!2.66e-07!365;UBERON:0003056!3.11e-07!61;UBERON:0002791!4.43e-07!33;UBERON:0002780!4.99e-07!41;UBERON:0001890!4.99e-07!41;UBERON:0006240!4.99e-07!41;UBERON:0001869!7.43e-07!32;UBERON:0001893!7.63e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,8.84e-10,192;UBERON:0004111,5.93e-09,240;UBERON:0001017,7.41e-09,81;UBERON:0002346,9.41e-09,86;UBERON:0001049,1.58e-08,56;UBERON:0005068,1.58e-08,56;UBERON:0006241,1.58e-08,56;UBERON:0007135,1.58e-08,56;UBERON:0000073,1.93e-08,53;UBERON:0002616,1.93e-08,53;UBERON:0001016,2.30e-08,89;UBERON:0000119,3.32e-08,309;UBERON:0003075,4.24e-08,82;UBERON:0007284,4.24e-08,82;UBERON:0000483,7.51e-08,306;UBERON:0000955,1.12e-07,68;UBERON:0006238,1.12e-07,68;UBERON:0003528,2.32e-07,34;UBERON:0002020,2.32e-07,34;UBERON:0010314,3.19e-07,132;UBERON:0002791,4.13e-07,32;UBERON:0002780,4.99e-07,41;UBERON:0001890,4.99e-07,41;UBERON:0003080,4.99e-07,41;UBERON:0006240,4.99e-07,41;UBERON:0004121,6.15e-07,171;UBERON:0000924,6.15e-07,171;UBERON:0006601,6.15e-07,171;UBERON:0003056,6.31e-07,61;UBERON:0001869,7.43e-07,32;UBERON:0001893,7.63e-07,34 | |||
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| ||
|short_description=p1@PHF13 | |||
}} | }} |
Latest revision as of 00:11, 19 September 2015
Short description: | p1@PHF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PHF13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000495385_5end |
EntrezGene: | PHF13 |
HGNC: | 22983 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 8.84e-10 | 192 |
anatomical conduit | 5.93e-09 | 240 |
central nervous system | 7.41e-09 | 81 |
neurectoderm | 9.41e-09 | 86 |
neural tube | 1.58e-08 | 56 |
neural rod | 1.58e-08 | 56 |
future spinal cord | 1.58e-08 | 56 |
neural keel | 1.58e-08 | 56 |
regional part of nervous system | 1.93e-08 | 53 |
regional part of brain | 1.93e-08 | 53 |
nervous system | 2.30e-08 | 89 |
cell layer | 3.32e-08 | 309 |
neural plate | 4.24e-08 | 82 |
presumptive neural plate | 4.24e-08 | 82 |
epithelium | 7.51e-08 | 306 |
brain | 1.12e-07 | 68 |
future brain | 1.12e-07 | 68 |
brain grey matter | 2.32e-07 | 34 |
gray matter | 2.32e-07 | 34 |
structure with developmental contribution from neural crest | 3.19e-07 | 132 |
regional part of telencephalon | 4.13e-07 | 32 |
regional part of forebrain | 4.99e-07 | 41 |
forebrain | 4.99e-07 | 41 |
anterior neural tube | 4.99e-07 | 41 |
future forebrain | 4.99e-07 | 41 |
ectoderm-derived structure | 6.15e-07 | 171 |
ectoderm | 6.15e-07 | 171 |
presumptive ectoderm | 6.15e-07 | 171 |
pre-chordal neural plate | 6.31e-07 | 61 |
cerebral hemisphere | 7.43e-07 | 32 |
telencephalon | 7.63e-07 | 34 |