FFCP PHASE1:Hg19::chr1:65886229..65886243,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:65886229..65886243,+ to FFCP PHASE1:Hg19::chr1:65886229..65886243,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3953 | |EntrezGene=3953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6554 | |HGNC=6554 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-4bp_to_ENST00000344610_5end | |||
|cluster_id=chr1:65886229..65886243,+ | |||
|description=CAGE_peak_4_at_LEPR_5end | |||
|id=chr1:65886229..65886243,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.28e-12!115;UBERON:0005743!9.95e-10!86;UBERON:0001017!1.41e-09!82;UBERON:0001049!2.80e-09!57;UBERON:0005068!2.80e-09!57;UBERON:0006241!2.80e-09!57;UBERON:0007135!2.80e-09!57;UBERON:0000073!1.65e-08!94;UBERON:0001016!1.65e-08!94;UBERON:0003075!2.11e-08!86;UBERON:0007284!2.11e-08!86;UBERON:0002616!2.22e-08!59;UBERON:0002346!4.27e-08!90;UBERON:0002780!4.53e-08!41;UBERON:0001890!4.53e-08!41;UBERON:0006240!4.53e-08!41;UBERON:0001869!6.14e-08!32;UBERON:0003080!9.23e-08!42;UBERON:0001893!1.08e-07!34;UBERON:0002791!1.97e-07!33;UBERON:0002020!2.42e-07!34;UBERON:0003528!2.42e-07!34;UBERON:0000955!4.47e-07!69;UBERON:0006238!4.47e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.56e-11,114;UBERON:0001017,6.56e-09,81;UBERON:0001049,7.82e-09,56;UBERON:0005068,7.82e-09,56;UBERON:0006241,7.82e-09,56;UBERON:0007135,7.82e-09,56;UBERON:0003075,9.09e-09,82;UBERON:0007284,9.09e-09,82;UBERON:0002346,1.58e-08,86;UBERON:0002780,8.49e-08,41;UBERON:0001890,8.49e-08,41;UBERON:0003080,8.49e-08,41;UBERON:0006240,8.49e-08,41;UBERON:0001869,8.80e-08,32;UBERON:0000073,9.13e-08,53;UBERON:0002616,9.13e-08,53;UBERON:0001893,1.74e-07,34;UBERON:0001016,1.90e-07,89;UBERON:0002791,5.93e-07,32;UBERON:0003056,7.15e-07,61;UBERON:0003528,8.20e-07,34;UBERON:0002020,8.20e-07,34;UBERON:0010314,8.57e-07,132 | |||
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| ||
|short_description=p4@LEPR | |||
}} | }} |
Latest revision as of 23:15, 18 September 2015
Short description: | p4@LEPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LEPR_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000344610_5end |
EntrezGene: | LEPR |
HGNC: | 6554 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.56e-11 | 114 |
central nervous system | 6.56e-09 | 81 |
neural tube | 7.82e-09 | 56 |
neural rod | 7.82e-09 | 56 |
future spinal cord | 7.82e-09 | 56 |
neural keel | 7.82e-09 | 56 |
neural plate | 9.09e-09 | 82 |
presumptive neural plate | 9.09e-09 | 82 |
neurectoderm | 1.58e-08 | 86 |
regional part of forebrain | 8.49e-08 | 41 |
forebrain | 8.49e-08 | 41 |
anterior neural tube | 8.49e-08 | 41 |
future forebrain | 8.49e-08 | 41 |
cerebral hemisphere | 8.80e-08 | 32 |
regional part of nervous system | 9.13e-08 | 53 |
regional part of brain | 9.13e-08 | 53 |
telencephalon | 1.74e-07 | 34 |
nervous system | 1.90e-07 | 89 |
regional part of telencephalon | 5.93e-07 | 32 |
pre-chordal neural plate | 7.15e-07 | 61 |
brain grey matter | 8.20e-07 | 34 |
gray matter | 8.20e-07 | 34 |
structure with developmental contribution from neural crest | 8.57e-07 | 132 |