FFCP PHASE1:Hg19::chr1:64058926..64058937,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:64058926..64058937,+ to FFCP PHASE1:Hg19::chr1:64058926..64058937,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5236 | |EntrezGene=5236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8905 | |HGNC=8905 | ||
|TSSclassifier=strong | |||
|UniProt=P36871 | |UniProt=P36871 | ||
|association_with_transcript=-9bp_to_ENST00000371084,NM_002633,uc001dbh.2_5end | |||
|cluster_id=chr1:64058926..64058937,+ | |||
|description=CAGE_peak_6_at_PGM1_5end | |||
|id=chr1:64058926..64058937,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.18e-10!180 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.26e-07,55;CL:0000393,3.90e-07,61;CL:0000211,3.90e-07,61;CL:0000680,5.29e-07,58;CL:0000056,5.29e-07,58;CL:0000355,5.29e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!1.71e-12!238;UBERON:0009142!1.71e-12!238;UBERON:0002100!2.84e-12!216;UBERON:0005256!4.56e-11!143;UBERON:0000481!2.89e-10!347;UBERON:0000914!9.85e-09!83;UBERON:0002329!9.85e-09!83;UBERON:0003077!9.85e-09!83;UBERON:0003059!9.85e-09!83;UBERON:0007282!9.85e-09!83;UBERON:0009618!9.85e-09!83;UBERON:0007285!9.85e-09!83;UBERON:0000475!1.59e-08!365;UBERON:0000486!2.16e-08!82;UBERON:0001048!2.37e-08!168;UBERON:0004290!4.95e-08!70;UBERON:0000466!1.19e-07!126;UBERON:0002385!1.62e-07!63;UBERON:0001015!1.62e-07!63;UBERON:0000383!1.62e-07!63;UBERON:0001134!6.24e-07!61;UBERON:0002036!6.24e-07!61;UBERON:0003082!6.24e-07!61;UBERON:0004119!7.94e-07!169;UBERON:0000925!7.94e-07!169;UBERON:0006595!7.94e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.48e-11,199;UBERON:0005256,8.47e-11,122;UBERON:0000486,2.48e-10,83;UBERON:0002329,1.23e-09,71;UBERON:0003059,1.23e-09,71;UBERON:0007282,1.23e-09,71;UBERON:0004290,1.23e-09,71;UBERON:0009618,1.23e-09,71;UBERON:0007524,1.58e-09,73;UBERON:0003077,2.85e-09,72;UBERON:0007285,2.85e-09,72;UBERON:0002385,3.26e-09,64;UBERON:0001015,3.26e-09,64;UBERON:0000383,3.26e-09,64;UBERON:0003104,5.57e-09,160;UBERON:0009142,5.57e-09,160;UBERON:0007503,1.54e-08,78;UBERON:0001134,1.72e-08,62;UBERON:0002036,1.72e-08,62;UBERON:0003082,1.72e-08,62 | |||
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| ||
|short_description=p6@PGM1 | |||
}} | }} |
Latest revision as of 20:55, 18 September 2015
Short description: | p6@PGM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PGM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000371084, NM_002633, uc001dbh.2_5end |
EntrezGene: | PGM1 |
HGNC: | 8905 |
UniProt: | P36871 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.26e-07 | 55 |
electrically responsive cell | 3.90e-07 | 61 |
electrically active cell | 3.90e-07 | 61 |
muscle precursor cell | 5.29e-07 | 58 |
myoblast | 5.29e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.29e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.48e-11 | 199 |
trunk mesenchyme | 8.47e-11 | 122 |
multilaminar epithelium | 2.48e-10 | 83 |
somite | 1.23e-09 | 71 |
presomitic mesoderm | 1.23e-09 | 71 |
presumptive segmental plate | 1.23e-09 | 71 |
dermomyotome | 1.23e-09 | 71 |
trunk paraxial mesoderm | 1.23e-09 | 71 |
dense mesenchyme tissue | 1.58e-09 | 73 |
paraxial mesoderm | 2.85e-09 | 72 |
presumptive paraxial mesoderm | 2.85e-09 | 72 |
muscle tissue | 3.26e-09 | 64 |
musculature | 3.26e-09 | 64 |
musculature of body | 3.26e-09 | 64 |
mesenchyme | 5.57e-09 | 160 |
entire embryonic mesenchyme | 5.57e-09 | 160 |
epithelial vesicle | 1.54e-08 | 78 |
skeletal muscle tissue | 1.72e-08 | 62 |
striated muscle tissue | 1.72e-08 | 62 |
myotome | 1.72e-08 | 62 |