FFCP PHASE1:Hg19::chr1:62421845..62421855,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:62421845..62421855,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr1:62421845..62421855,+ | |||
|id=chr1:62421845..62421855,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002552;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,3.49e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.33e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;6.30e-21;2!DOID:1287;3.60e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.70e-21,2;DOID:1287,3.42e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.70e-33!115;UBERON:0001049!5.53e-31!57;UBERON:0005068!5.53e-31!57;UBERON:0006241!5.53e-31!57;UBERON:0007135!5.53e-31!57;UBERON:0003075!6.00e-31!86;UBERON:0007284!6.00e-31!86;UBERON:0002616!7.68e-30!59;UBERON:0002346!2.05e-29!90;UBERON:0000955!1.04e-24!69;UBERON:0006238!1.04e-24!69;UBERON:0005743!1.47e-24!86;UBERON:0001017!4.25e-23!82;UBERON:0002791!4.08e-22!33;UBERON:0000073!6.13e-22!94;UBERON:0001016!6.13e-22!94;UBERON:0001893!1.98e-21!34;UBERON:0004733!5.32e-21!12;UBERON:0002028!5.32e-21!12;UBERON:0007277!5.32e-21!12;UBERON:0004732!2.39e-19!13;UBERON:0000153!3.79e-19!129;UBERON:0007811!3.79e-19!129;UBERON:0001869!7.10e-19!32;UBERON:0000033!3.38e-18!123;UBERON:0002020!1.05e-17!34;UBERON:0003528!1.05e-17!34;UBERON:0002780!1.53e-17!41;UBERON:0001890!1.53e-17!41;UBERON:0006240!1.53e-17!41;UBERON:0003080!4.34e-17!42;UBERON:0003076!1.06e-16!15;UBERON:0003057!1.06e-16!15;UBERON:0000369!6.06e-16!4;UBERON:0002435!6.06e-16!4;UBERON:0000204!6.06e-16!4;UBERON:0010082!6.06e-16!4;UBERON:0004121!2.63e-15!169;UBERON:0001950!4.76e-15!20;UBERON:0001873!6.82e-15!2;UBERON:0010122!6.82e-15!2;UBERON:0000924!7.31e-15!173;UBERON:0006601!7.31e-15!173;UBERON:0002619!1.13e-13!22;UBERON:0003056!1.74e-13!61;UBERON:0002680!3.76e-13!9;UBERON:0001895!3.76e-13!9;UBERON:0010092!3.76e-13!9;UBERON:0002420!1.95e-12!9;UBERON:0007245!1.95e-12!9;UBERON:0010009!1.95e-12!9;UBERON:0010011!1.95e-12!9;UBERON:0000454!1.95e-12!9;UBERON:0000956!5.28e-12!25;UBERON:0000203!5.28e-12!25;UBERON:0002037!1.36e-11!6;UBERON:0006215!1.36e-11!6;UBERON:0003978!2.71e-10!3;UBERON:0009751!2.71e-10!3;UBERON:0000946!2.71e-10!3;UBERON:0002523!2.71e-10!3;UBERON:0005983!2.71e-10!3;UBERON:0002165!2.71e-10!3;UBERON:0002062!2.71e-10!3;UBERON:0007280!2.71e-10!3;UBERON:0001896!3.12e-10!3;UBERON:0005383!3.12e-10!3;UBERON:0005290!3.12e-10!3;UBERON:0005382!3.12e-10!3;UBERON:0010096!3.12e-10!3;UBERON:0000064!8.20e-10!219;UBERON:0009663!2.44e-09!7;UBERON:0000025!4.48e-09!194;UBERON:0004111!1.42e-08!241;UBERON:0002426!1.52e-08!1;UBERON:0003831!1.52e-08!1;UBERON:0003898!1.52e-08!1;UBERON:0004830!1.52e-08!1;UBERON:0001774!1.52e-08!1;UBERON:0003830!1.52e-08!1;UBERON:0005175!1.52e-08!1;UBERON:0003897!1.52e-08!1;UBERON:0001103!1.52e-08!1;UBERON:0010084!1.52e-08!1;UBERON:0002298!1.98e-08!8;UBERON:0000477!2.07e-08!286;UBERON:0000483!2.15e-08!309;UBERON:0002135!2.33e-08!1;UBERON:0001871!2.49e-08!7;UBERON:0002146!2.50e-08!1;UBERON:0005623!2.50e-08!1;UBERON:0000119!2.87e-08!312;UBERON:0003112!3.33e-08!1;UBERON:0000032!3.33e-08!1;UBERON:0005253!3.33e-08!1;UBERON:0003128!3.33e-08!1;UBERON:0002241!3.33e-08!1;UBERON:0001703!3.33e-08!1;UBERON:0004761!3.33e-08!1;UBERON:0009617!3.33e-08!1;UBERON:0002022!4.72e-08!1;UBERON:0002336!5.82e-08!1;UBERON:0001018!5.82e-08!1;UBERON:0002473!5.82e-08!1;UBERON:0005340!5.82e-08!1;UBERON:0002316!5.82e-08!1;UBERON:0003544!5.82e-08!1;UBERON:0001020!5.82e-08!1;UBERON:0005970!5.82e-08!1;UBERON:0002437!5.82e-08!1;UBERON:0001882!6.68e-08!1;UBERON:0005403!6.68e-08!1;UBERON:0002308!2.29e-07!9;UBERON:0000125!2.29e-07!9;UBERON:0000481!5.73e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;8.14e-60;6!UBERON:0002680;2.91e-40;9!UBERON:0001895;2.91e-40;9!UBERON:0004733;1.81e-30;12!UBERON:0002028;1.81e-30;12!UBERON:0004732;3.33e-28;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.15e-60,6;UBERON:0006215,8.15e-60,6;UBERON:0002680,2.91e-40,9;UBERON:0001895,2.91e-40,9;UBERON:0010092,2.91e-40,9;UBERON:0004733,1.81e-30,12;UBERON:0002028,1.81e-30,12;UBERON:0007277,1.81e-30,12;UBERON:0004732,3.33e-28,13;UBERON:0003076,1.40e-24,15;UBERON:0003057,1.40e-24,15;UBERON:0000073,1.99e-07,53;UBERON:0002616,1.99e-07,53;UBERON:0001049,4.48e-07,56;UBERON:0005068,4.48e-07,56;UBERON:0006241,4.48e-07,56;UBERON:0007135,4.48e-07,56 | |||
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|short_description=p@chr1:62421845..62421855,+ | |||
}} | }} |
Latest revision as of 09:34, 28 July 2015
Short description: | p@chr1:62421845..62421855, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:62421845..62421855, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.15e-60 | 6 |
rhombic lip | 8.15e-60 | 6 |
regional part of metencephalon | 2.91e-40 | 9 |
metencephalon | 2.91e-40 | 9 |
future metencephalon | 2.91e-40 | 9 |
segmental subdivision of hindbrain | 1.81e-30 | 12 |
hindbrain | 1.81e-30 | 12 |
presumptive hindbrain | 1.81e-30 | 12 |
segmental subdivision of nervous system | 3.33e-28 | 13 |
posterior neural tube | 1.40e-24 | 15 |
chordal neural plate | 1.40e-24 | 15 |
regional part of nervous system | 1.99e-07 | 53 |
regional part of brain | 1.99e-07 | 53 |
neural tube | 4.48e-07 | 56 |
neural rod | 4.48e-07 | 56 |
future spinal cord | 4.48e-07 | 56 |
neural keel | 4.48e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.70e-21 | 2 |
cardiovascular system disease | 3.42e-11 | 4 |