FFCP PHASE1:Hg19::chr1:47903201..47903211,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:47903201..47903211,- to FFCP PHASE1:Hg19::chr1:47903201..47903211,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:47903201..47903211,- | |||
|description=CAGE_peak_at_chr1:47903201..47903211,- | |||
|id=chr1:47903201..47903211,- | |||
|ontology_enrichment_celltype=CL:0000838!8.02e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0002202;5.63e-09;9!CL:0002632;5.63e-09;9!CL:0000322;2.55e-07;3!CL:0000307;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,7.45e-09,9;CL:0002632,7.45e-09,9;CL:0000068,2.97e-07,3;CL:0000069,2.97e-07,3;CL:0000307,2.97e-07,3;CL:0000377,2.97e-07,3;CL:0000322,3.35e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;2.47e-19;1!UBERON:0004874;2.47e-19;1!CL:0000377;2.55e-07;3 | |||
|ontology_enrichment_disease=DOID:162!2.93e-16!235;DOID:305!4.35e-16!106;DOID:14566!2.01e-15!239;DOID:0050687!1.25e-14!143 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.37e-10;2!DOID:1036;5.54e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,3.58e-10,2;DOID:1036,6.94e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0001007!3.66e-08!155;UBERON:0001555!3.66e-08!155;UBERON:0007026!3.66e-08!155;UBERON:0004921!2.19e-07!129;UBERON:0004185!2.19e-07!129;UBERON:0004119!2.30e-07!169;UBERON:0000925!2.30e-07!169;UBERON:0006595!2.30e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;2.47e-19;1!UBERON:0000989;2.47e-19;1!UBERON:0000997;2.47e-19;1!UBERON:0008811;2.47e-19;1!UBERON:0005056;2.47e-19;1!UBERON:0004176;2.47e-19;1!UBERON:0002360;2.37e-10;2!UBERON:0004903;2.37e-10;2!UBERON:0000094;2.37e-10;2!UBERON:0010743;2.37e-10;2!UBERON:0002173;2.37e-10;2!UBERON:0002186;2.37e-10;2!UBERON:0004821;2.55e-07;3!UBERON:0007499;2.55e-07;3!UBERON:0003215;2.55e-07;3!UBERON:0010368;2.55e-07;3!UBERON:0009911;2.55e-07;3!UBERON:0002299;2.55e-07;3!UBERON:0006524;2.55e-07;3!UBERON:0008874;2.55e-07;3!UBERON:0002169;2.55e-07;3!UBERON:0004894;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,1.30e-19,1;UBERON:0007645,1.30e-19,1;UBERON:0007647,1.30e-19,1;UBERON:0010115,1.30e-19,1;UBERON:0000997,1.56e-19,1;UBERON:0005056,1.56e-19,1;UBERON:0000989,1.88e-19,1;UBERON:0008811,1.88e-19,1;UBERON:0006258,1.88e-19,1;UBERON:0005876,1.88e-19,1;UBERON:0004874,1.88e-19,1;UBERON:0002360,1.72e-10,2;UBERON:0000094,1.72e-10,2;UBERON:0010743,1.72e-10,2;UBERON:0004903,3.58e-10,2;UBERON:0002173,3.58e-10,2;UBERON:0002186,3.58e-10,2;UBERON:0004821,3.35e-07,3;UBERON:0003215,3.35e-07,3;UBERON:0010368,3.35e-07,3;UBERON:0009911,3.35e-07,3;UBERON:0002299,3.35e-07,3;UBERON:0006524,3.35e-07,3;UBERON:0008874,3.35e-07,3;UBERON:0002169,3.35e-07,3;UBERON:0004894,3.35e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0.697204805222715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0.394061520403854,0.431255149719035,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0.144269212976445,0.284567373393656,0.159426272728822,0,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0.568272293612826,0,0,0,0,0,0.445234820091624,0.329607748453519,0.211125408127993,0.398495976502139,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0.539210106883961,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.01701460117107,0.236387681767936,0,0.291604613383254,0.347249989866585,0,0,0,0.110579259931225,0,0.219385397153973,0,0.697118721393016,0,0,0.23056390438806,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0.282706142867882,0,2.98578579323551,0.0884575645033392,0.611030144933625,0.296521128680622,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,1.89559738885464,0.450970258243478,0,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0,1.56787835863004,0.261177619741208,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0.144090417154106,0.114536596165916,0,0.14405479798815,0.248505071130865,0,0,0.104602846312333,0.305994652908965,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0.157363764404994,0,0,0.767660789277781,0,0,0,0,0,0,0,1.14929529049075,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0.106691729694141,0.344429959321631,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.687034029507179,0,0.366857197043358,0.462102664601353,0,0,0,0.0752103283492573,0.20170506870352,0,0.261906694481422,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,1.48863353516788,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0.913158720509496,0.431855182437243,0.47775168788705,0.357382720883282,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0.687051635306701,0.121917924982269,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0.458729283404541,0,0.788857810965923,0,0,0,0,0,0,0,0,0,0,0,0.827054095813604,0,0.151557396436479,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0.651226148887796,0.213454691755431,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0.697204805222715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616804496998528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0.802320587350522,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.300091096084402,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896681151948218,0.394061520403854,0.431255149719035,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0.587403472388222,0.343143423810856,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92495971052672,0,0,0.144269212976445,0.284567373393656,0.159426272728822,0,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0,0,0,0.687010689511529,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.111443384277478,0.568272293612826,0,0,0,0,0,0.445234820091624,0.329607748453519,0.211125408127993,0.398495976502139,0.276283915531148,0,0.102268682502155,0.246169610922139,0,0.539210106883961,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,1.01701460117107,0.236387681767936,0,0.291604613383254,0.347249989866585,0,0,0,0.110579259931225,0,0.219385397153973,0,0.697118721393016,0,0,0.23056390438806,0,0,0,0,0,1.02193298195737,0.156980256395025,0,0,0,0,0,0,0,0,0.282706142867882,0,2.98578579323551,0.0884575645033392,0.611030144933625,0.296521128680622,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,1.89559738885464,0.450970258243478,0,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0,1.56787835863004,0.261177619741208,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0.144090417154106,0.114536596165916,0,0.14405479798815,0.248505071130865,0,0,0.104602846312333,0.305994652908965,0,0,0,0,0,0.525774708558629,0,0.229160424011684,0,0.199679000498991,0,0,0.0671834724867263,0,1.16495949527454,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0,0,0,0,0.157363764404994,0,0,0.767660789277781,0,0,0,0,0,0,0,1.14929529049075,0,0.113312091520126,0,0,0,0,0.342173675768659,0,0,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0.124980407962107,0.151649117541648,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0.106691729694141,0.344429959321631,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.70975570501128,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0.687034029507179,0,0.366857197043358,0.462102664601353,0,0,0,0.0752103283492573,0.20170506870352,0,0.261906694481422,0.327543835020193,0,0.0675375846183947,0,0,0,0,0,1.48863353516788,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.222462803784138,0.078493092850514,0,0,0.913158720509496,0.431855182437243,0.47775168788705,0.357382720883282,0,0.116241425368125,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0.687051635306701,0.121917924982269,0,0,0,0,0.233939463462106,0.198950775161368,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0.458729283404541,0,0.788857810965923,0,0,0,0,0,0,0,0,0,0,0,0.827054095813604,0,0.151557396436479,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0.651226148887796,0.213454691755431,0,0.179650404213174,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr1:47903201..47903211,- | |||
}} | }} |
Latest revision as of 08:53, 28 July 2015
Short description: | p@chr1:47903201..47903211, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:47903201..47903211, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 7.45e-09 | 9 |
epithelial cell of lower respiratory tract | 7.45e-09 | 9 |
duct epithelial cell | 2.97e-07 | 3 |
branched duct epithelial cell | 2.97e-07 | 3 |
tracheal epithelial cell | 2.97e-07 | 3 |
tracheoblast | 2.97e-07 | 3 |
pneumocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dura mater | 1.30e-19 | 1 |
future meninx | 1.30e-19 | 1 |
ectomeninx | 1.30e-19 | 1 |
future dura mater | 1.30e-19 | 1 |
mammalian vulva | 1.56e-19 | 1 |
external female genitalia | 1.56e-19 | 1 |
penis | 1.88e-19 | 1 |
intromittent organ | 1.88e-19 | 1 |
lateral plate mesenchyme | 1.88e-19 | 1 |
undifferentiated genital tubercle | 1.88e-19 | 1 |
somatopleure | 1.88e-19 | 1 |
meninx | 1.72e-10 | 2 |
membrane organ | 1.72e-10 | 2 |
meningeal cluster | 1.72e-10 | 2 |
bronchoalveolar duct junction | 3.58e-10 | 2 |
alveolar duct | 3.58e-10 | 2 |
bronchiole | 3.58e-10 | 2 |
pulmonary alveolus epithelium | 3.35e-07 | 3 |
alveolus | 3.35e-07 | 3 |
pulmonary lobule | 3.35e-07 | 3 |
lobule | 3.35e-07 | 3 |
alveolus of lung | 3.35e-07 | 3 |
alveolar system | 3.35e-07 | 3 |
pulmonary acinus | 3.35e-07 | 3 |
alveolar sac | 3.35e-07 | 3 |
alveolar wall | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 3.58e-10 | 2 |
chronic leukemia | 6.94e-10 | 8 |