FFCP PHASE1:Hg19::chr1:37984640..37984646,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:37984640..37984646,+ to FFCP PHASE1:Hg19::chr1:37984640..37984646,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:37984640..37984646,+ | |||
|coexpression_cluster_id=C1178 | |||
|description=CAGE_peak_at_chr1:37984640..37984646,+ | |||
|id=chr1:37984640..37984646,+ | |||
|ontology_enrichment_celltype=CL:0000084!3.92e-19!25;CL:0000827!3.92e-19!25;CL:0000791!1.96e-18!18;CL:0000789!1.96e-18!18;CL:0002420!1.96e-18!18;CL:0002419!1.96e-18!18;CL:0000790!1.96e-18!18;CL:0000838!1.57e-17!52;CL:0000542!5.53e-17!53;CL:0000051!5.53e-17!53;CL:0000988!4.31e-12!182;CL:0000037!5.75e-12!172;CL:0000566!5.75e-12!172;CL:0000625!1.43e-11!11;CL:0002032!6.80e-10!165;CL:0000837!6.80e-10!165;CL:0000738!5.86e-09!140;CL:0002087!4.78e-08!119;CL:0002031!6.19e-08!124;CL:0000624!1.80e-07!6;CL:0000080!5.42e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.84e-24;25!CL:0000625;7.80e-20;11!CL:0000791;4.28e-19;18!CL:0000789;4.28e-19;18!CL:0002419;4.28e-19;18!CL:0000623;2.42e-14;3!CL:0000542;1.56e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.92e-24,25;CL:0000827,6.92e-24,25;CL:0000625,9.05e-20,11;CL:0000791,5.48e-19,18;CL:0000789,5.48e-19,18;CL:0002420,5.48e-19,18;CL:0002419,5.48e-19,18;CL:0000790,5.48e-19,18;CL:0000838,1.86e-16,52;CL:0000542,4.40e-16,53;CL:0000051,4.40e-16,53;CL:0000623,1.53e-14,3;CL:0000825,1.53e-14,3;CL:0000988,1.24e-12,177;CL:0000037,2.38e-12,168;CL:0002032,1.06e-10,161;CL:0000837,1.06e-10,161 | |||
|ontology_enrichment_development_v019=CL:0000790;4.28e-19;18!CL:0000051;1.56e-08;53!UBERON:0009117;1.34e-07;10!UBERON:0005564;1.34e-07;10 | |||
|ontology_enrichment_disease=DOID:2531!3.41e-07!51;DOID:0060083!3.41e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.10e-14;8!DOID:1240;5.00e-12;39!DOID:8692;7.55e-11;31!DOID:2531;9.34e-11;51!DOID:0060083;9.34e-11;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.38e-14,8;DOID:1240,2.01e-14,39;DOID:2531,1.75e-12,51;DOID:0060083,1.75e-12,51;DOID:8692,2.23e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!6.04e-10!15;UBERON:0000179!6.04e-10!15;UBERON:0000463!6.04e-10!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0.232401601740905,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.37696839079683,0.393010762749165,1.23360899399706,0.83593247695339,0.977766799900771,0.946895611469467,1.94826728407911,0.445641827540694,0.883817722424512,0.443067789167242,0.541607727530031,0.384273959177026,1.1705341280389,0.822189523018381,0.276350017785848,0,0.741432815810302,0.267540828089713,2.09071047609954,0.339928028092699,0.383220493601921,0.68725489096526,0.253019692019503,0.95569624297229,2.60433381542567,0,0.903450714466637,1.4078527226986,1.24930726552346,1.18388626022008,0.821127996921047,4.03213486449465,3.7441627409691,2.46201486600758,0,0,0,0,0,0,0,0,0,0,0.175669571386252,2.03017567021455,0,0,0,0,0.132957960518865,0.238490624305342,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,4.85609409356116,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,1.57624608161542,3.23441362289276,1.92514554419623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0.764637207142375,1.70894156152249,0.714695326373367,1.64544909234478,0.648473311192717,0,0,0.320472213382419,0,0,0,0.721346064882224,2.27653898714925,1.27541018183058,0,0,0,1.29848776109822,1.68478306868075,0,0,0,0,0,0,0.425846237690326,1.03051603426729,0,0,0,0,0,0,0,0.99921590399346,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,2.69272933229316,0.108647371922008,0,0,0,4.08773192782946,0,2.16075186470203,1.1279783030859,2.35275041181287,2.68514539161348,3.03605972358696,0.158936578980379,0,0,0.424059214301822,0,0,0.0884575645033392,0,3.55825354416746,0.617819694732514,0.104421949505455,0.067401132980677,0,0,0,0.782658475728359,0,0,0,0,0.126373159256976,52.4628733756579,0.933193722575224,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.483781656445426,0.584714536689484,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.0824158583811665,1.01105315781277,0,0.592713324460491,0,0.136203406111576,0.482259445395058,0.275078873194468,0.83088067605837,0.2249738915515,0,0,0,0.394028536495991,0.262272940674991,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,54.7384220357306,0.365377795142688,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0.247871528518004,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0.790068058663633,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.769583617218004,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0.515663103788617,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,1.89249637252618,1.42045243552804,0,0.407955318967927,0.26721740526556,0,78.220752259221,1.81868875723775,2.41167717140561,0,0,0.213233981900981,0,0.581300188524055,3.47618400056804,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0.393364276848904,0,0.154816123316076,0,0,0,0.232401601740905,0.426507697462265,0,0,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0.560508562981536,0,1.37696839079683,0.393010762749165,1.23360899399706,0.83593247695339,0.977766799900771,0.946895611469467,1.94826728407911,0.445641827540694,0.883817722424512,0.443067789167242,0.541607727530031,0.384273959177026,1.1705341280389,0.822189523018381,0.276350017785848,0,0.741432815810302,0.267540828089713,2.09071047609954,0.339928028092699,0.383220493601921,0.68725489096526,0.253019692019503,0.95569624297229,2.60433381542567,0,0.903450714466637,1.4078527226986,1.24930726552346,1.18388626022008,0.821127996921047,4.03213486449465,3.7441627409691,2.46201486600758,0,0,0,0,0,0,0,0,0,0,0.175669571386252,2.03017567021455,0,0,0,0,0.132957960518865,0.238490624305342,1.71598473234038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,4.85609409356116,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,1.57624608161542,3.23441362289276,1.92514554419623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0.308061348417659,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0.764637207142375,1.70894156152249,0.714695326373367,1.64544909234478,0.648473311192717,0,0,0.320472213382419,0,0,0,0.721346064882224,2.27653898714925,1.27541018183058,0,0,0,1.29848776109822,1.68478306868075,0,0,0,0,0,0,0.425846237690326,1.03051603426729,0,0,0,0,0,0,0,0.99921590399346,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0.102268682502155,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,2.69272933229316,0.108647371922008,0,0,0,4.08773192782946,0,2.16075186470203,1.1279783030859,2.35275041181287,2.68514539161348,3.03605972358696,0.158936578980379,0,0,0.424059214301822,0,0,0.0884575645033392,0,3.55825354416746,0.617819694732514,0.104421949505455,0.067401132980677,0,0,0,0.782658475728359,0,0,0,0,0.126373159256976,52.4628733756579,0.933193722575224,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.483781656445426,0.584714536689484,0.328461828212837,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.0824158583811665,1.01105315781277,0,0.592713324460491,0,0.136203406111576,0.482259445395058,0.275078873194468,0.83088067605837,0.2249738915515,0,0,0,0.394028536495991,0.262272940674991,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0.496166021811951,54.7384220357306,0.365377795142688,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0.247871528518004,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.11796972334774,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0.672567444437648,0,0,0,0.230467975111559,0,0.0679697329768317,0,0,0,0,0,0.280272163313789,0,0,0.47775168788705,0,0.790068058663633,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0.769583617218004,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0.515663103788617,0,0,0,0,0,0,0,0.157771562193185,0,0,0.5290268405154,0,0,0,1.89249637252618,1.42045243552804,0,0.407955318967927,0.26721740526556,0,78.220752259221,1.81868875723775,2.41167717140561,0,0,0.213233981900981,0,0.581300188524055,3.47618400056804,0,0,0,0,0,0.740872583160463,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:37984640..37984646,+ | |||
}} | }} |
Latest revision as of 07:53, 28 July 2015
Short description: | p@chr1:37984640..37984646, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:37984640..37984646, + |
Coexpression cluster: | C1178_embryonic_testicular_teratocarcinoma_lymphangiectasia_epithelioid_bronchioalveolar_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.92e-24 | 25 |
pro-T cell | 6.92e-24 | 25 |
CD8-positive, alpha-beta T cell | 9.05e-20 | 11 |
mature alpha-beta T cell | 5.48e-19 | 18 |
alpha-beta T cell | 5.48e-19 | 18 |
immature T cell | 5.48e-19 | 18 |
mature T cell | 5.48e-19 | 18 |
immature alpha-beta T cell | 5.48e-19 | 18 |
lymphoid lineage restricted progenitor cell | 1.86e-16 | 52 |
lymphocyte | 4.40e-16 | 53 |
common lymphoid progenitor | 4.40e-16 | 53 |
natural killer cell | 1.53e-14 | 3 |
pro-NK cell | 1.53e-14 | 3 |
hematopoietic cell | 1.24e-12 | 177 |
hematopoietic stem cell | 2.38e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.06e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-10 | 161 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.38e-14 | 8 |
leukemia | 2.01e-14 | 39 |
hematologic cancer | 1.75e-12 | 51 |
immune system cancer | 1.75e-12 | 51 |
myeloid leukemia | 2.23e-10 | 31 |