FFCP PHASE1:Hg19::chr1:33647631..33647670,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:33647631..33647670,- to FFCP PHASE1:Hg19::chr1:33647631..33647670,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55223 | |EntrezGene=55223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25574 | |HGNC=25574 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VSX7,Q9BVG3 | |UniProt=Q5VSX7,Q9BVG3 | ||
|association_with_transcript=0bp_to_ENST00000373430,ENST00000373432,ENST00000482586,ENST00000485148,ENST00000486583,NM_018207,uc001bxb.2_5end | |||
|cluster_id=chr1:33647631..33647670,- | |||
|description=CAGE_peak_1_at_TRIM62_5end | |||
|id=chr1:33647631..33647670,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.22e-22!59;UBERON:0001049!2.07e-21!57;UBERON:0005068!2.07e-21!57;UBERON:0006241!2.07e-21!57;UBERON:0007135!2.07e-21!57;UBERON:0000153!5.60e-21!129;UBERON:0007811!5.60e-21!129;UBERON:0003075!6.09e-21!86;UBERON:0007284!6.09e-21!86;UBERON:0000955!8.16e-21!69;UBERON:0006238!8.16e-21!69;UBERON:0007023!1.34e-20!115;UBERON:0000033!2.10e-20!123;UBERON:0001017!2.33e-19!82;UBERON:0002346!1.73e-18!90;UBERON:0005743!2.77e-18!86;UBERON:0004121!1.95e-16!169;UBERON:0000073!6.51e-16!94;UBERON:0001016!6.51e-16!94;UBERON:0003056!3.50e-15!61;UBERON:0000924!4.97e-15!173;UBERON:0006601!4.97e-15!173;UBERON:0003080!3.48e-14!42;UBERON:0002780!4.62e-14!41;UBERON:0001890!4.62e-14!41;UBERON:0006240!4.62e-14!41;UBERON:0002020!8.46e-11!34;UBERON:0003528!8.46e-11!34;UBERON:0001893!9.00e-11!34;UBERON:0002791!2.27e-10!33;UBERON:0001869!1.29e-09!32;UBERON:0003076!1.04e-08!15;UBERON:0003057!1.04e-08!15;UBERON:0002619!1.22e-08!22;UBERON:0004732!3.98e-08!13;UBERON:0001950!1.10e-07!20;UBERON:0004733!1.65e-07!12;UBERON:0002028!1.65e-07!12;UBERON:0007277!1.65e-07!12;UBERON:0000956!6.25e-07!25;UBERON:0000203!6.25e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.03e-11;53!UBERON:0002616;1.03e-11;53!UBERON:0002780;2.74e-10;41!UBERON:0001890;2.74e-10;41!UBERON:0001017;1.76e-09;75!UBERON:0001893;2.46e-09;34!UBERON:0000955;2.57e-09;68!UBERON:0003528;3.45e-09;34!UBERON:0002020;3.45e-09;34!UBERON:0002791;1.23e-08;32!UBERON:0002619;1.35e-08;22!UBERON:0001869;1.65e-08;32!UBERON:0004732;3.79e-08;13!UBERON:0001016;1.03e-07;83!UBERON:0001950;1.24e-07;20!UBERON:0004733;1.58e-07;12!UBERON:0002028;1.58e-07;12!UBERON:0000956;6.82e-07;25!UBERON:0000203;6.82e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,1.16e-21,82;UBERON:0007284,1.16e-21,82;UBERON:0001049,2.71e-21,56;UBERON:0005068,2.71e-21,56;UBERON:0006241,2.71e-21,56;UBERON:0007135,2.71e-21,56;UBERON:0010371,3.31e-21,104;UBERON:0000955,1.13e-20,68;UBERON:0006238,1.13e-20,68;UBERON:0007023,3.53e-20,114;UBERON:0000073,5.17e-20,53;UBERON:0002616,5.17e-20,53;UBERON:0001017,3.35e-19,81;UBERON:0002346,4.46e-19,86;UBERON:0001016,1.29e-16,89;UBERON:0003056,1.39e-15,61;UBERON:0004121,3.01e-15,171;UBERON:0000924,3.01e-15,171;UBERON:0006601,3.01e-15,171;UBERON:0002780,4.62e-14,41;UBERON:0001890,4.62e-14,41;UBERON:0003080,4.62e-14,41;UBERON:0006240,4.62e-14,41;UBERON:0003528,8.46e-11,34;UBERON:0002020,8.46e-11,34;UBERON:0001893,9.00e-11,34;UBERON:0010314,3.09e-10,132;UBERON:0002791,8.65e-10,32;UBERON:0001869,1.29e-09,32;UBERON:0003076,1.04e-08,15;UBERON:0003057,1.04e-08,15;UBERON:0002619,1.22e-08,22;UBERON:0004732,3.98e-08,13;UBERON:0001950,1.10e-07,20;UBERON:0004733,1.65e-07,12;UBERON:0002028,1.65e-07,12;UBERON:0007277,1.65e-07,12;UBERON:0000956,6.25e-07,25;UBERON:0000203,6.25e-07,25 | |||
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87685173 | ||
|short_description=p1@TRIM62 | |||
}} | }} |
Latest revision as of 16:56, 17 September 2015
Short description: | p1@TRIM62 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM62_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000373430, ENST00000373432, ENST00000482586, ENST00000485148, ENST00000486583, NM_018207, uc001bxb.2_5end |
EntrezGene: | TRIM62 |
HGNC: | 25574 |
UniProt: | Q5VSX7Q9BVG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data