FFCP PHASE1:Hg19::chr1:27114159..27114169,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:27114159..27114169,+ to FFCP PHASE1:Hg19::chr1:27114159..27114169,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55650 | |EntrezGene=55650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26031 | |HGNC=26031 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=196bp_to_ENST00000430292_5end | |||
|cluster_id=chr1:27114159..27114169,+ | |||
|description=CAGE_peak_4_at_PIGV_5end | |||
|id=chr1:27114159..27114169,+ | |||
|ontology_enrichment_celltype=CL:0000359!7.55e-15!32;CL:0000192!1.70e-09!42;CL:0000514!1.70e-09!42;CL:0000791!4.35e-09!18;CL:0000789!4.35e-09!18;CL:0002420!4.35e-09!18;CL:0002419!4.35e-09!18;CL:0000790!4.35e-09!18;CL:0000084!1.68e-08!25;CL:0000827!1.68e-08!25;CL:0002539!2.13e-07!10;CL:0000625!2.44e-07!11;CL:0000723!3.49e-07!436;CL:0000034!6.76e-07!444;CL:0000838!7.35e-07!52;CL:0000048!8.63e-07!430;CL:0000680!8.99e-07!57;CL:0000056!8.99e-07!57;CL:0000355!8.99e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.78e-36;32!CL:0000192;3.51e-20;43!CL:0002539;6.24e-16;10!CL:0002594;1.58e-13;4!CL:0002595;8.06e-12;5!CL:0000623;9.48e-12;3!CL:0000187;1.05e-09;55!CL:0002593;2.45e-08;2!CL:0002589;4.83e-08;2!CL:0000393;2.83e-07;61!CL:0000211;2.83e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.28e-38,32;CL:0000192,1.02e-26,43;CL:0000514,1.02e-26,43;CL:0000187,9.91e-20,55;CL:0000680,1.94e-18,58;CL:0000056,1.94e-18,58;CL:0000355,1.94e-18,58;CL:0000393,2.81e-17,61;CL:0000211,2.81e-17,61;CL:0002539,3.82e-16,10;CL:0002594,1.35e-13,4;CL:0002595,7.60e-12,5;CL:0000623,8.46e-12,3;CL:0000825,8.46e-12,3;CL:0002593,2.47e-08,2;CL:0002589,4.30e-08,2;CL:0000048,1.37e-07,427;CL:0000034,1.44e-07,441;CL:0000723,2.47e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000514;3.51e-20;43!CL:0000355;3.80e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!7.59e-12!42;UBERON:0003509!7.59e-12!42;UBERON:0004572!7.59e-12!42;UBERON:0004573!1.94e-09!33;UBERON:0004571!1.94e-09!33;UBERON:0004237!2.13e-07!10;UBERON:0004695!2.13e-07!10;UBERON:0002111!2.13e-07!10;UBERON:0004178!2.13e-07!10;UBERON:0001981!2.95e-07!60;UBERON:0007500!2.95e-07!60;UBERON:0004537!2.95e-07!60;UBERON:0006965!2.95e-07!60;UBERON:0004872!4.44e-07!84;UBERON:0001009!5.52e-07!113;UBERON:0004535!9.81e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;8.45e-20;42!UBERON:0003509;8.45e-20;42!UBERON:0004572;8.45e-20;42!UBERON:0004573;1.04e-19;33!UBERON:0004571;1.04e-19;33!UBERON:0004237;6.24e-16;10!UBERON:0004695;6.24e-16;10!UBERON:0002111;6.24e-16;10!UBERON:0004178;6.24e-16;10!UBERON:0001310;1.58e-13;4!UBERON:0003834;8.06e-12;5!UBERON:0001533;8.06e-12;5!UBERON:0007500;7.52e-11;56!UBERON:0001981;7.52e-11;56!UBERON:0004537;7.52e-11;56!UBERON:0001135;2.93e-10;15!UBERON:0000947;3.05e-09;21!UBERON:0010191;3.05e-09;21!UBERON:0003513;1.97e-08;7!UBERON:0002456;2.45e-08;2!UBERON:0001529;4.83e-08;2!UBERON:0007204;4.83e-08;2!UBERON:0002049;2.67e-07;75!UBERON:0007798;2.67e-07;75!UBERON:0000055;4.10e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.06e-30,42;UBERON:0003509,1.06e-30,42;UBERON:0004572,1.06e-30,42;UBERON:0004573,3.47e-23,33;UBERON:0004571,3.47e-23,33;UBERON:0007500,3.12e-20,59;UBERON:0001981,3.12e-20,59;UBERON:0004537,3.12e-20,59;UBERON:0006965,3.12e-20,59;UBERON:0004872,5.85e-19,83;UBERON:0001134,6.48e-17,62;UBERON:0002036,6.48e-17,62;UBERON:0003082,6.48e-17,62;UBERON:0000055,7.93e-17,68;UBERON:0004535,8.29e-17,109;UBERON:0002385,3.17e-16,64;UBERON:0001015,3.17e-16,64;UBERON:0000383,3.17e-16,64;UBERON:0001009,3.63e-16,112;UBERON:0004237,3.82e-16,10;UBERON:0004695,3.82e-16,10;UBERON:0002111,3.82e-16,10;UBERON:0004178,3.82e-16,10;UBERON:0002329,7.82e-16,71;UBERON:0003059,7.82e-16,71;UBERON:0007282,7.82e-16,71;UBERON:0004290,7.82e-16,71;UBERON:0009618,7.82e-16,71;UBERON:0003077,1.54e-15,72;UBERON:0007285,1.54e-15,72;UBERON:0007524,2.98e-15,73;UBERON:0002049,5.59e-14,78;UBERON:0007798,5.59e-14,78;UBERON:0007503,6.24e-14,78;UBERON:0001310,1.35e-13,4;UBERON:0003914,8.54e-13,117;UBERON:0000486,8.98e-13,83;UBERON:0003834,7.60e-12,5;UBERON:0001533,7.60e-12,5;UBERON:0001135,2.14e-10,15;UBERON:0000947,2.37e-09,21;UBERON:0010191,2.37e-09,21;UBERON:0003513,1.89e-08,7;UBERON:0002456,2.47e-08,2;UBERON:0001529,4.30e-08,2;UBERON:0007204,4.30e-08,2;UBERON:0005256,5.65e-08,122;UBERON:0000490,3.00e-07,148;UBERON:0003081,3.13e-07,203 | |||
|phase1_expression=0,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,5.3786011716142,6.02694528023977,4.38186054232424,1.46379839637152,0.123121058076788,0,0,0,0.136874425072884,0,0,0.164201178899891,0,0.786728553697808,3.0706351847777,0.928896739896456,0,0,0,0.0774672005803016,0.142169232487422,0,0.553995408531877,0.802177789880567,0.651032612147555,0,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0.545812300115692,0.224723484445085,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,1.12101712596307,0,1.180258620683,0.393010762749165,0.411202997999018,0.501559486172034,0,0,0,0.445641827540694,0.294605907474837,0.443067789167242,0.541607727530031,1.0247305578054,1.1705341280389,1.47994114143309,1.10540007114339,0.869409257205157,0,0,0,0.679856056185397,2.29932296161153,0.34362744548263,1.01207876807801,0.637130828648193,0.651083453856419,0.950452044448374,0.451725357233318,0.895906278080929,1.24930726552346,0.710331756132051,0,3.22570789159572,3.7441627409691,3.47578569318718,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.378139268656271,0,0,0,0,0,0,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,2.63560834872127,0,0,0,0.12663051166458,7.41491412554025,0.286836620748814,0,0,1.06748995729705,1.72667283892012,0,0.269421344139376,0,0.454072282934794,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45071417671979,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0,0.515281080091258,0,1.18143432568886,0.292311015483596,0,0,0,0,0.201504196455281,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0,0,0,0,3.12899064659632,0,0,1.85747171212792,0,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0.441463099414651,0,0,0.439001141634502,0,0.100528972411631,0.0925884451585296,0,0,4.3299402607582,0.579652024875384,0.352226082707465,0.144366447761074,0.462985512576611,0,0.790204397959275,0,0,0.234004265139238,0,0,0.503946384596579,0.425325291727159,0.0895585227028483,0,0,0.492663237895943,0,0,0.288239906833923,0,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,1.29271715757778,0,0,0.531876233169741,0,0,0,0,0,0.542621605391443,0,0,0,0,0.904318131178758,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.868687840005475,0,0.179060963239896,0.112085143993527,3.94061520403854,8.19384784466166,6.03212270514817,0,0,0,0.167516265334349,0.637938751653163,0,0,1.24324654030811,0,0,0,0,0,0.157702415033935,0,0.601892199455438,0,0,0,0,0,0.195801157462741,0,0.413536052245775,1.07857100409308,0.853820462427555,0.303127571446259,0,0,0.496215615637554,0.460385919864187,0.280660094433074,0.256278298511402,0,0.965123526861645,1.48418066444991,0.154209693802656,0,0.246381468041427,0,0,0,0.200506470303285,0,0,0,0,0,0.231046011313244,0,0,0.105551628892876,0,0,0.431831832204279,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0,0,0,0.127612712494584,0,1.39453664789186,0.62962469366128,0,1.84820148105653,2.12922412126809,0.869932992075073,2.7798632865588,3.43499728180779,0,0.316379424718726,0,0,0,0.636406495851874,1.56989728039846,0,0,0,1.41527737101321,0,0.842516912477962,0,4.6305563029944,4.22600587027022,0,0,1.13008116620243,0,2.65375590096488,4.38450885253763,0,0,2.02910376962704,1.8589409885985,1.12678241012897,0,0.392996164052485,2.1400263088875,0.354761064070598,0.633322905892992,0,0,0,0,0,1.08890984861323,0.0941438007767792,0,0,0,0,1.01489521846434,1.52927441428475,0,0.952927101831156,0,0.648473311192717,0,0,0.106824071127473,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.222886768554957,0,0.23874448473769,0,0,0.994147647766298,0.140669416410513,0.111308705022906,0,0.211125408127993,0.398495976502139,0.276283915531148,0.251932747854276,0,0,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0.347249989866585,1.77148277162768,0.120596438625408,0,0.110579259931225,0,0.219385397153973,0.10893846351899,0,0.153900517007594,0.797594390929008,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0.167821586975843,0,0,0,0,0,0,0,0.176915129006678,0,0,0.370691816839509,0.730953646538188,0,0,0.234264445725339,0,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0.0979923974143777,0.609414446062818,0.17472666824203,0.859930162358083,0.19351266257817,0.0730893170861856,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0.19980960958213,0,0.229073192331831,0,0.288109595976299,0,0.235694034616795,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0.399358000997982,0,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| ||
|short_description=p4@PIGV | |||
}} | }} |
Latest revision as of 06:28, 17 September 2015
Short description: | p4@PIGV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PIGV_5end |
Coexpression cluster: | NA |
Association with transcript: | 196bp_to_ENST00000430292_5end |
EntrezGene: | PIGV |
HGNC: | 26031 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.28e-38 | 32 |
smooth muscle cell | 1.02e-26 | 43 |
smooth muscle myoblast | 1.02e-26 | 43 |
muscle cell | 9.91e-20 | 55 |
muscle precursor cell | 1.94e-18 | 58 |
myoblast | 1.94e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.94e-18 | 58 |
electrically responsive cell | 2.81e-17 | 61 |
electrically active cell | 2.81e-17 | 61 |
aortic smooth muscle cell | 3.82e-16 | 10 |
smooth muscle cell of the umbilical artery | 1.35e-13 | 4 |
smooth muscle cell of the subclavian artery | 7.60e-12 | 5 |
natural killer cell | 8.46e-12 | 3 |
pro-NK cell | 8.46e-12 | 3 |
smooth muscle cell of the internal thoracic artery | 2.47e-08 | 2 |
smooth muscle cell of the brachiocephalic vasculature | 4.30e-08 | 2 |
multi fate stem cell | 1.37e-07 | 427 |
stem cell | 1.44e-07 | 441 |
somatic stem cell | 2.47e-07 | 433 |