FFCP PHASE1:Hg19::chr1:26607604..26607669,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:26607604..26607669,+ to FFCP PHASE1:Hg19::chr1:26607604..26607669,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:26607604..26607669,+ | |||
|coexpression_cluster_id=C853 | |||
|description=CAGE_peak_at_chr1:26607604..26607669,+ | |||
|id=chr1:26607604..26607669,+ | |||
|ontology_enrichment_celltype=CL:0002371!1.23e-25!591;CL:0000723!5.77e-22!436;CL:0000144!1.16e-21!625;CL:0000048!1.99e-21!430;CL:0000034!5.68e-20!444;CL:0002057!2.44e-17!42;CL:0000766!1.63e-16!76;CL:0000860!2.12e-14!45;CL:0000839!7.05e-14!70;CL:0002320!1.33e-13!365;CL:0000557!2.82e-13!71;CL:0000134!6.11e-13!358;CL:0002194!6.63e-13!63;CL:0000576!6.63e-13!63;CL:0000040!6.63e-13!63;CL:0000559!6.63e-13!63;CL:0002009!2.53e-12!65;CL:0000548!2.18e-11!679;CL:0000004!2.18e-11!679;CL:0000255!2.18e-11!679;CL:0000012!1.05e-10!682;CL:0000222!2.97e-10!119;CL:0000055!9.71e-10!180;CL:0000003!1.11e-09!722;CL:0000219!1.65e-09!390;CL:0000183!2.10e-08!59;CL:0000680!2.38e-08!57;CL:0000056!2.38e-08!57;CL:0000355!2.38e-08!57;CL:0000187!5.33e-08!54;CL:0000763!9.70e-08!112;CL:0000049!9.70e-08!112;CL:0000192!1.70e-07!42;CL:0000514!1.70e-07!42;CL:0000359!2.56e-07!32;CL:0000057!8.03e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.36e-16;33!CL:0002057;1.36e-16;33!CL:0000473;1.76e-15;39!CL:0000234;1.76e-15;39!CL:0000766;2.27e-09;69!CL:0000576;2.62e-09;48!CL:0000359;3.43e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,4.71e-23,433;CL:0000048,1.66e-22,427;CL:0000034,4.77e-21,441;CL:0000473,2.02e-19,48;CL:0000234,2.02e-19,48;CL:0000766,7.71e-19,72;CL:0000860,2.28e-17,42;CL:0002057,2.28e-17,42;CL:0000839,4.75e-16,66;CL:0000557,1.96e-15,67;CL:0002194,4.00e-15,59;CL:0000576,4.00e-15,59;CL:0000040,4.00e-15,59;CL:0000559,4.00e-15,59;CL:0002009,2.02e-14,61;CL:0002320,2.40e-14,361;CL:0000134,1.15e-13,354;CL:0000222,1.27e-10,121;CL:0000219,3.31e-10,386;CL:0000763,5.49e-09,108;CL:0000049,5.49e-09,108;CL:0000680,1.89e-08,58;CL:0000056,1.89e-08,58;CL:0000355,1.89e-08,58;CL:0000187,4.26e-08,55;CL:0000192,1.38e-07,43;CL:0000514,1.38e-07,43;CL:0000359,2.50e-07,32;CL:0000057,7.10e-07,76;CL:0000393,8.69e-07,61;CL:0000211,8.69e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;7.05e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.47e-21!216;UBERON:0002204!7.20e-19!167;UBERON:0002371!9.16e-14!80;UBERON:0002384!5.59e-13!375;UBERON:0004765!9.43e-12!101;UBERON:0001434!9.43e-12!101;UBERON:0001474!1.54e-11!86;UBERON:0002390!1.88e-11!102;UBERON:0003061!1.88e-11!102;UBERON:0002193!3.27e-11!112;UBERON:0001637!4.07e-10!42;UBERON:0003509!4.07e-10!42;UBERON:0004572!4.07e-10!42;UBERON:0004872!5.88e-10!84;UBERON:0000486!1.89e-09!82;UBERON:0002405!6.12e-09!115;UBERON:0000914!7.01e-09!83;UBERON:0002329!7.01e-09!83;UBERON:0003077!7.01e-09!83;UBERON:0003059!7.01e-09!83;UBERON:0007282!7.01e-09!83;UBERON:0009618!7.01e-09!83;UBERON:0007285!7.01e-09!83;UBERON:0000926!7.18e-09!448;UBERON:0004120!7.18e-09!448;UBERON:0006603!7.18e-09!448;UBERON:0001981!1.02e-08!60;UBERON:0007500!1.02e-08!60;UBERON:0004537!1.02e-08!60;UBERON:0006965!1.02e-08!60;UBERON:0004290!1.37e-08!70;UBERON:0004573!6.55e-08!33;UBERON:0004571!6.55e-08!33;UBERON:0004535!6.82e-08!110;UBERON:0000055!9.10e-08!69;UBERON:0001009!2.95e-07!113;UBERON:0002049!4.24e-07!79;UBERON:0007798!4.24e-07!79;UBERON:0001134!5.34e-07!61;UBERON:0002036!5.34e-07!61;UBERON:0003082!5.34e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.90e-07;42!UBERON:0003509;1.90e-07;42!UBERON:0004572;1.90e-07;42!UBERON:0004573;2.33e-07;33!UBERON:0004571;2.33e-07;33 | |||
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| ||
|short_description=p@chr1:26607604..26607669,+ | |||
}} | }} |
Latest revision as of 06:35, 28 July 2015
Short description: | p@chr1:26607604..26607669, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:26607604..26607669, + |
Coexpression cluster: | C853_Neutrophils_leiomyoma_Smooth_Monocytederived_CD14_Osteoblast_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 4.71e-23 | 433 |
multi fate stem cell | 1.66e-22 | 427 |
stem cell | 4.77e-21 | 441 |
defensive cell | 2.02e-19 | 48 |
phagocyte | 2.02e-19 | 48 |
myeloid leukocyte | 7.71e-19 | 72 |
classical monocyte | 2.28e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.28e-17 | 42 |
myeloid lineage restricted progenitor cell | 4.75e-16 | 66 |
granulocyte monocyte progenitor cell | 1.96e-15 | 67 |
monopoietic cell | 4.00e-15 | 59 |
monocyte | 4.00e-15 | 59 |
monoblast | 4.00e-15 | 59 |
promonocyte | 4.00e-15 | 59 |
macrophage dendritic cell progenitor | 2.02e-14 | 61 |
connective tissue cell | 2.40e-14 | 361 |
mesenchymal cell | 1.15e-13 | 354 |
mesodermal cell | 1.27e-10 | 121 |
motile cell | 3.31e-10 | 386 |
myeloid cell | 5.49e-09 | 108 |
common myeloid progenitor | 5.49e-09 | 108 |
muscle precursor cell | 1.89e-08 | 58 |
myoblast | 1.89e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.89e-08 | 58 |
muscle cell | 4.26e-08 | 55 |
smooth muscle cell | 1.38e-07 | 43 |
smooth muscle myoblast | 1.38e-07 | 43 |
vascular associated smooth muscle cell | 2.50e-07 | 32 |
fibroblast | 7.10e-07 | 76 |
electrically responsive cell | 8.69e-07 | 61 |
electrically active cell | 8.69e-07 | 61 |