FFCP PHASE1:Hg19::chr1:25256439..25256476,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:25256439..25256476,- to FFCP PHASE1:Hg19::chr1:25256439..25256476,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=864 | |EntrezGene=864 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |HGNC=10473 | ||
|TSSclassifier=strong | |||
|UniProt=Q13761 | |UniProt=Q13761 | ||
|association_with_transcript=-71bp_to_ENST00000308873_5end | |||
|cluster_id=chr1:25256439..25256476,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_RUNX3_5end | |||
|id=chr1:25256439..25256476,- | |||
|ontology_enrichment_celltype=CL:0000738!2.34e-66!140;CL:0000037!4.76e-64!172;CL:0000566!4.76e-64!172;CL:0000988!6.68e-63!182;CL:0002032!8.90e-61!165;CL:0000837!8.90e-61!165;CL:0002031!2.20e-53!124;CL:0002087!2.49e-53!119;CL:0000766!1.26e-42!76;CL:0000763!5.18e-41!112;CL:0000049!5.18e-41!112;CL:0000557!8.24e-39!71;CL:0002009!2.06e-35!65;CL:0000839!1.64e-34!70;CL:0002194!6.83e-34!63;CL:0000576!6.83e-34!63;CL:0000040!6.83e-34!63;CL:0000559!6.83e-34!63;CL:0002057!2.32e-32!42;CL:0000860!1.50e-28!45;CL:0000542!1.17e-16!53;CL:0000051!1.17e-16!53;CL:0000838!2.32e-16!52;CL:0000134!1.51e-14!358;CL:0002320!1.59e-14!365;CL:0000219!5.87e-13!390;CL:0002393!2.31e-08!9;CL:0002397!2.31e-08!9;CL:0000945!3.50e-08!24;CL:0000826!3.50e-08!24;CL:0000081!7.18e-08!11;CL:0000084!9.07e-08!25;CL:0000827!9.07e-08!25;CL:0000791!2.19e-07!18;CL:0000789!2.19e-07!18;CL:0002420!2.19e-07!18;CL:0002419!2.19e-07!18;CL:0000790!2.19e-07!18;CL:0000094!2.81e-07!8;CL:0000451!3.58e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.19e-34;33!CL:0002057;1.19e-34;33!CL:0000576;1.46e-32;48!CL:0000473;3.09e-30;39!CL:0000234;3.09e-30;39!CL:0000766;4.10e-27;69!CL:0002087;7.36e-22;104!CL:0000738;1.28e-19;136!CL:0000763;5.89e-17;100!CL:0000988;4.17e-15;177!CL:0000542;1.08e-10;53!CL:0000945;1.45e-10;24!CL:0000094;3.03e-10;8!CL:0000451;6.61e-10;10!CL:0000081;8.25e-10;11!CL:0000990;1.32e-08;8!CL:0000219;1.44e-08;193!CL:0002393;1.76e-08;6!CL:0002397;1.76e-08;6!CL:0000840;5.87e-07;5!CL:0000084;8.16e-07;25!CL:0000791;8.95e-07;18!CL:0000789;8.95e-07;18!CL:0002419;8.95e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.08e-94,136;CL:0000037,1.17e-87,168;CL:0000988,4.17e-85,177;CL:0002032,2.14e-82,161;CL:0000837,2.14e-82,161;CL:0002087,3.33e-75,115;CL:0002031,1.11e-74,120;CL:0000766,2.95e-65,72;CL:0000557,2.31e-59,67;CL:0000763,3.87e-59,108;CL:0000049,3.87e-59,108;CL:0002009,8.46e-56,61;CL:0002194,1.96e-53,59;CL:0000576,1.96e-53,59;CL:0000040,1.96e-53,59;CL:0000559,1.96e-53,59;CL:0000839,1.98e-53,66;CL:0000473,1.74e-50,48;CL:0000234,1.74e-50,48;CL:0000860,9.56e-49,42;CL:0002057,9.56e-49,42;CL:0000134,5.13e-28,354;CL:0002320,2.62e-27,361;CL:0000219,3.95e-27,386;CL:0000542,3.16e-19,53;CL:0000051,3.16e-19,53;CL:0000838,8.80e-19,52;CL:0000048,3.13e-16,427;CL:0000034,5.71e-16,441;CL:0000723,1.83e-15,433;CL:0002393,5.89e-12,9;CL:0002397,5.89e-12,9;CL:0000945,5.22e-11,24;CL:0000826,5.22e-11,24;CL:0000094,2.65e-10,8;CL:0000451,3.82e-10,10;CL:0000081,8.75e-10,11;CL:0000990,9.79e-09,8;CL:0000084,6.28e-07,25;CL:0000827,6.28e-07,25;CL:0000791,6.83e-07,18;CL:0000789,6.83e-07,18;CL:0002420,6.83e-07,18;CL:0002419,6.83e-07,18;CL:0000790,6.83e-07,18;CL:0000840,7.05e-07,5;CL:0001029,7.05e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.94e-35;42!CL:0000049;3.30e-16;108!CL:0000051;1.08e-10;53!CL:0000790;8.95e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.97e-45!102;UBERON:0003061!2.97e-45!102;UBERON:0002193!1.10e-39!112;UBERON:0002371!4.43e-34!80;UBERON:0001474!2.91e-31!86;UBERON:0004765!1.21e-28!101;UBERON:0001434!1.21e-28!101;UBERON:0002405!6.67e-22!115;UBERON:0002384!5.27e-14!375;UBERON:0000178!1.12e-08!15;UBERON:0000179!1.12e-08!15;UBERON:0000463!1.12e-08!15;UBERON:0003081!7.36e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.04e-11;15!UBERON:0000179;3.04e-11;15!UBERON:0000463;3.04e-11;15!UBERON:0002390;3.14e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.54e-66,98;UBERON:0003061,1.54e-66,98;UBERON:0002193,7.54e-61,108;UBERON:0002371,3.83e-53,76;UBERON:0002405,8.71e-50,93;UBERON:0001474,3.07e-49,82;UBERON:0004765,4.96e-44,90;UBERON:0001434,1.35e-39,100;UBERON:0002384,5.23e-26,371;UBERON:0003081,3.26e-19,203;UBERON:0002204,1.82e-14,167;UBERON:0000178,4.21e-11,15;UBERON:0000179,4.21e-11,15;UBERON:0000463,4.21e-11,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06316195519468,1.88831355734875,2.67616656466509,18.8814852887474,10.3633937486247,34.678811622801,0,0.30120591877825,0.369754010166788,0.0774672005803016,2.13253848731132,1.46800219667424,12.1878989877013,25.6696892761781,24.956250132323,4.47830948479849,2.59114932815184,2.83333124397605,16.4300009820908,29.4743236077271,20.1344770785887,12.7835970298127,14.8020439687857,13.3173739484895,15.8230815777183,23.3106242941482,13.4794871036494,8.96338769915208,12.9096936716765,10.8341189275473,17.5065375774622,23.1970227549169,6.51698104890745,12.549439587207,12.8371610830437,14.7047538933779,26.0582527147506,39.4938042090831,20.4587880255693,5.80418477257168,7.37600792098482,3.11411124497787,16.3311632416883,22.4237654920687,14.3344637505377,5.44859552370032,6.62899744777616,8.22802207346299,8.23895616616573,16.7957396972384,9.43463904787692,3.25753030324836,6.00707571366025,4.17886525412408,15.1056754182862,14.7198341127327,16.0744455312878,0,4.36910889009705,0.889509253863555,1.28019066769952,4.00395987036012,2.87376219977242,1.98313461835459,0,7.39976859842283,8.80855784056408,8.02773779062981,2.64342657158052,1.12101712596307,2.10707267820062,1.57367816091066,3.14408610199332,4.11202997999018,0.167186495390678,1.62961133316795,0.946895611469467,1.94826728407911,2.22820913770347,2.06224135232386,1.10766947291811,1.35401931882508,1.15282187753108,1.69077151827842,0.493313713811028,0.552700035571697,0,0.593146252648242,1.07016331235885,0,0.113309342697566,1.91610246800961,0.68725489096526,1.26509846009751,0.318565414324097,0,0.950452044448374,0.903450714466637,1.4078527226986,2.49861453104692,1.65744076430812,0.821127996921047,4.63695509416885,6.15112450302067,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,3.24547393654683,2.43781632218974,5.05240249971688,2.38490624305342,3.43196946468077,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,7.75560528296651,0.436094052142534,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.469737994575059,0.323745888736263,0.842704840213491,1.02077085627447,1.10550885580591,2.47981874821837,1.18800285728205,0,0,0,0.336672227908132,0.750711119231785,1.6623846929051,1.31693286264251,0.30648779579902,0.300476117813194,0,0.89694817844431,0.85422955527427,0,0.300091096084402,0.618315175430633,1.03056216018252,0.37223371266318,0.168776332241266,0.0974370051611986,0.252433774244115,0.276149695926898,0,0,0,0.339121184620975,0,0.272746120590835,0,0,0,0,0.207322110030741,0,0,0,0.643240938192885,2.76269842704961,0.928735856063958,1.44375896333917,0,0,0,0,0,0.237270619111097,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,1.95484983186195,0,0,0,0.117408694235822,0,0,0,0,0,1.72351904261178,0.936017060556951,1.48631162288728,0,0.335964256397719,0,0,0,0,0.985326475791887,1.58487181223807,4.76854665743776,6.48539790376326,4.92345490362882,2.79390734885544,4.96584953225761,8.20522130470329,13.6857956818164,2.67351481028641,2.70308752059526,3.71574362419752,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.51579964002488,4.21667878966063,0.718874566474748,1.14861935834114,0,0,0,0,3.58672460779287,7.48716888767323,4.52817907204986,12.1925884465761,0,0,0,0,0,8.98808428736619,8.97484377612075,11.603634376209,0.12269149171914,1.50051156317903,0.542530047399471,1.24782516918484,0.356857977594324,0.473107245101804,0.117141414992713,0,0,0,0,0.553107505625109,0,0.195801157462741,0,7.85718499266972,11.4328526433867,8.96511485548932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,1.13841952129715,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,2.29391162142713,7.40541343326411,1.90585420366231,2.87953591160336,3.24236655596359,3.24018862342869,2.37937552888281,0,0,1.47024129588619,1.11481905075431,0,0,0.478278818186467,1.39705560002972,1.1490322207942,1.69338866179106,0,1.12318871245384,0.456469358066384,2.0368386450493,0,0.50787533340481,0.642352300414798,2.82519590067467,0.425846237690326,1.37402137902306,0.921722292925374,1.3420566473545,1.66849141711908,2.34465714482448,0,0,0.270455678475983,0,1.4098700508785,0,0.146508179271894,0.485442086998054,4.01196183398922,0,0,0.593929361665277,0,0,0.140669416410513,0,0.494411622680279,1.26675244876796,0.19924798825107,0.552567831062295,0,0,1.84627208191604,0.933118762985422,0,0,5.11572370226872,0.394573622547734,9.57932369387759,0,0,0.0927680981618513,0,0,0,0.724999575434793,0.455173793141999,0,0.236387681767936,0,0,1.04174996959975,0,0.241192877250816,0,0,0,0.219385397153973,0,0.557694977114413,0.153900517007594,0,0,0,0,0,0,1.06606955203727,0,0.784901281975124,1.16348177330109,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,1.48260564340311,1.11207545051853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| ||
|short_description=p3@RUNX3 | |||
}} | }} |
Latest revision as of 02:38, 17 September 2015
Short description: | p3@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RUNX3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -71bp_to_ENST00000308873_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | Q13761 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.54e-66 | 98 |
blood island | 1.54e-66 | 98 |
hemolymphoid system | 7.54e-61 | 108 |
bone marrow | 3.83e-53 | 76 |
immune system | 8.71e-50 | 93 |
bone element | 3.07e-49 | 82 |
skeletal element | 4.96e-44 | 90 |
skeletal system | 1.35e-39 | 100 |
connective tissue | 5.23e-26 | 371 |
lateral plate mesoderm | 3.26e-19 | 203 |
musculoskeletal system | 1.82e-14 | 167 |
blood | 4.21e-11 | 15 |
haemolymphatic fluid | 4.21e-11 | 15 |
organism substance | 4.21e-11 | 15 |