FFCP PHASE1:Hg19::chr1:23857252..23857297,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:23857252..23857297,- to FFCP PHASE1:Hg19::chr1:23857252..23857297,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1870 | |EntrezGene=1870 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3114 | |HGNC=3114 | ||
|TSSclassifier=strong | |||
|UniProt=Q14209 | |UniProt=Q14209 | ||
|association_with_transcript=414bp_to_ENST00000361729,NM_004091_5end | |||
|cluster_id=chr1:23857252..23857297,- | |||
|description=CAGE_peak_5_at_E2F2_5end | |||
|id=chr1:23857252..23857297,- | |||
|ontology_enrichment_celltype=CL:0000945!3.81e-07!24;CL:0000826!3.81e-07!24;CL:0000542!4.12e-07!53;CL:0000051!4.12e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.44e-14;2!CL:0000242;1.44e-14;2!CL:0000945;1.28e-12;24!CL:0000817;3.20e-08;1!CL:0000785;3.80e-08;1!CL:0000819;3.80e-08;1!CL:0000946;1.18e-07;1!CL:0000786;1.18e-07;1!CL:0000542;9.64e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,2.00e-20,3;CL:0000242,1.54e-14,2;CL:0000785,5.81e-14,2;CL:0000955,5.81e-14,2;CL:0000818,5.81e-14,2;CL:0000954,5.81e-14,2;CL:0000816,5.81e-14,2;CL:0000945,1.20e-12,24;CL:0000826,1.20e-12,24;CL:0000838,9.75e-09,52;CL:0000542,1.52e-08,53;CL:0000051,1.52e-08,53;CL:0000819,3.55e-08,1;CL:0000946,1.75e-07,1;CL:0000786,1.75e-07,1;CL:0000980,1.75e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000954;4.18e-14;2!CL:0000051;9.64e-07;53 | |||
|ontology_enrichment_disease=DOID:162!1.99e-18!235;DOID:14566!1.96e-17!239;DOID:2531!7.72e-12!51;DOID:0060083!7.72e-12!51;DOID:0050686!3.03e-11!137;DOID:0050687!3.76e-10!143;DOID:305!5.19e-10!106;DOID:1240!7.49e-08!39;DOID:0060058!1.43e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.50e-23;10!DOID:0060073;3.80e-08;1!DOID:8675;3.80e-08;1!DOID:2355;5.33e-08;1!DOID:1799;1.18e-07;1!DOID:10165;1.18e-07;1!DOID:1798;1.18e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.02e-23,10;DOID:2531,5.91e-09,51;DOID:0060083,5.91e-09,51;DOID:0060073,3.55e-08,1;DOID:8675,3.55e-08,1;DOID:2355,6.10e-08,1;DOID:1799,1.99e-07,1;DOID:10165,1.99e-07,1;DOID:1798,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.72e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.63e-14;2!UBERON:0005058;2.63e-14;2!UBERON:0009113;2.63e-14;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.31e-07,4;UBERON:0005058,1.31e-07,4;UBERON:0009113,1.31e-07,4;UBERON:0003295,1.31e-07,4;UBERON:0005562,1.31e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.376627918784408,0.534893840235659,0.328402357799783,0.708397031823113,0,0.383829398097213,0.309632246632152,0,0,0,8.59885926441348,1.70603078984906,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0.205601498999509,0.83593247695339,0,0,0,1.22551502573691,0.294605907474837,0.443067789167242,0,1.5370958367081,1.1705341280389,0.493313713811028,0.552700035571697,0.289803085735052,0,0,0,1.24640276967323,0.383220493601921,0.34362744548263,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.482022059766964,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0.560425719967636,0.197030760201927,0,0,0,1.30139853857622,1.54657762555539,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,0.438519753291869,0.784306353074702,0,0,0,0,0.54941678891006,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0,0.648473311192717,0,3.17250070517708,0.213648142254946,0,0.490080431962063,0.743212700502875,4.1838071763169,0.711418433484141,0,0.399158742865633,0,0,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.50787533340481,0,0,0,0,0.307240764308458,0,0,0.390776190804081,0.278406173895242,1.23087398947712,0.270455678475983,0,0,0.18714054040822,0,0.242721043499027,1.11443384277478,0,0,0,0,0,0,0,0,1.90012867315194,0,0.276283915531148,0,0,0.492339221844278,0,0.0898683511473268,0.358042349351218,0,0,4.7896618469388,0,0,0,0,0,0.349839999984783,0,0.341380344856499,0,0.472775363535873,1.37897349296586,0.291604613383254,2.95162491386597,0,0,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0.179515288819544,0,0,0,0,2.04386596391473,0,0.166211681900156,0,0.588187602953219,0.503464760927528,0.189753732724185,0,0.210998064528027,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,3.28418620588199,0.19566461893209,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.0979923974143777,0.0870592065804026,0,0,0.677294319023596,0.950161122120412,0.328461828212837,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0.343189995723929,0.14405479798815,0,0.707082103850386,0,0,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0.134366944973453,0,0,0.551482276150566,0,0.539228350833479,0.295282444544246,2.11683330164461,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0.25426853765475,0,0,0,0,0.410462603746695,0,0,0,2.65013777824443,0,0,0,0,0,0,0,0,1.18566979138767,1.46151118057075,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,1.38348634936231,0.124980407962107,0,0,0,6.55668868129634,2.46365748638403,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643324774124777,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0.344429959321631,0,0.184105950251841,0,0,0,0.862598491173454,0,0.109209638192014,0.169732529954025,0,0.371807292777007,0,0,3.07560805504888,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0.198916222116275,0,0,0,1.04762677792569,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,1.15233987555779,0,0,0,0,0.111231401892069,0,0,0.560544326627578,0,0.215927591218621,0,0,0.316027223465453,0.116241425368125,0.869291361512897,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.588901401691458,0,0,0,0,0,1.40363678077263,0,0.356760272332706,0.79062257427272,0.109940516745429,0.452888530700021,0.231522474323834,0.874238242015829,0,0,0.235676547101626,0,0,0.4226557275834,0,0.0939839179798536,0.322289439867886,0.199882311849858,0,0,0,0,0.458729283404541,0,0.157771562193185,0,0,0.5290268405154,0,0,0,0.378499274505237,0.764859003745869,0,0.305966489225945,0.534434810531121,0,0,0,0.267964130156178,0,0,0.213233981900981,0,2.841912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| ||
|short_description=p5@E2F2 | |||
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Latest revision as of 16:01, 16 September 2015
Short description: | p5@E2F2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_E2F2_5end |
Coexpression cluster: | NA |
Association with transcript: | 414bp_to_ENST00000361729, NM_004091_5end |
EntrezGene: | E2F2 |
HGNC: | 3114 |
UniProt: | Q14209 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 2.00e-20 | 3 |
Merkel cell | 1.54e-14 | 2 |
mature B cell | 5.81e-14 | 2 |
pre-B-II cell | 5.81e-14 | 2 |
transitional stage B cell | 5.81e-14 | 2 |
small pre-B-II cell | 5.81e-14 | 2 |
immature B cell | 5.81e-14 | 2 |
lymphocyte of B lineage | 1.20e-12 | 24 |
pro-B cell | 1.20e-12 | 24 |
lymphoid lineage restricted progenitor cell | 9.75e-09 | 52 |
lymphocyte | 1.52e-08 | 53 |
common lymphoid progenitor | 1.52e-08 | 53 |
B-1 B cell | 3.55e-08 | 1 |
antibody secreting cell | 1.75e-07 | 1 |
plasma cell | 1.75e-07 | 1 |
plasmablast | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.31e-07 | 4 |
hemolymphoid system gland | 1.31e-07 | 4 |
thymic region | 1.31e-07 | 4 |
pharyngeal gland | 1.31e-07 | 4 |
thymus primordium | 1.31e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.02e-23 | 10 |
hematologic cancer | 5.91e-09 | 51 |
immune system cancer | 5.91e-09 | 51 |
lymphatic system cancer | 3.55e-08 | 1 |
lymphosarcoma | 3.55e-08 | 1 |
anemia | 6.10e-08 | 1 |
islet cell tumor | 1.99e-07 | 1 |
endocrine pancreas cancer | 1.99e-07 | 1 |
pancreatic endocrine carcinoma | 1.99e-07 | 1 |