FFCP PHASE1:Hg19::chr1:234742195..234742210,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:234742195..234742210,- to FFCP PHASE1:Hg19::chr1:234742195..234742210,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=359948 | |EntrezGene=359948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=21729 | |HGNC=21729 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_BC053539_5end | |||
|cluster_id=chr1:234742195..234742210,- | |||
|description=CAGE_peak_6_at_IRF2BP2_5end | |||
|id=chr1:234742195..234742210,- | |||
|ontology_enrichment_celltype=CL:0000839!1.73e-07!70;CL:0002371!2.13e-07!591;CL:0002009!2.43e-07!65;CL:0000557!3.97e-07!71;CL:0000766!4.35e-07!76;CL:0000144!7.02e-07!625;CL:0000763!7.52e-07!112;CL:0000049!7.52e-07!112;CL:0002320!7.70e-07!365;CL:0002194!8.51e-07!63;CL:0000576!8.51e-07!63;CL:0000040!8.51e-07!63;CL:0000559!8.51e-07!63 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,4.48e-08,66;CL:0000763,5.01e-08,108;CL:0000049,5.01e-08,108;CL:0002009,6.09e-08,61;CL:0000766,7.05e-08,72;CL:0000557,8.17e-08,67;CL:0002194,2.35e-07,59;CL:0000576,2.35e-07,59;CL:0000040,2.35e-07,59;CL:0000559,2.35e-07,59;CL:0002320,4.96e-07,361;CL:0000988,6.71e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.66e-07!80;UBERON:0002405!8.47e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.86e-08,76;UBERON:0004765,4.00e-08,90;UBERON:0001474,2.29e-07,82;UBERON:0001434,2.58e-07,100;UBERON:0002390,4.18e-07,98;UBERON:0003061,4.18e-07,98 | |||
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| ||
|short_description=p6@IRF2BP2 | |||
}} | }} |
Latest revision as of 10:23, 16 September 2015
Short description: | p6@IRF2BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IRF2BP2_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_BC053539_5end |
EntrezGene: | IRF2BP2 |
HGNC: | 21729 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 4.48e-08 | 66 |
myeloid cell | 5.01e-08 | 108 |
common myeloid progenitor | 5.01e-08 | 108 |
macrophage dendritic cell progenitor | 6.09e-08 | 61 |
myeloid leukocyte | 7.05e-08 | 72 |
granulocyte monocyte progenitor cell | 8.17e-08 | 67 |
monopoietic cell | 2.35e-07 | 59 |
monocyte | 2.35e-07 | 59 |
monoblast | 2.35e-07 | 59 |
promonocyte | 2.35e-07 | 59 |
connective tissue cell | 4.96e-07 | 361 |
hematopoietic cell | 6.71e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.86e-08 | 76 |
skeletal element | 4.00e-08 | 90 |
bone element | 2.29e-07 | 82 |
skeletal system | 2.58e-07 | 100 |
hematopoietic system | 4.18e-07 | 98 |
blood island | 4.18e-07 | 98 |