FFCP PHASE1:Hg19::chr1:214454320..214454341,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:214454320..214454341,+ to FFCP PHASE1:Hg19::chr1:214454320..214454341,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56950 | |EntrezGene=56950 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20982 | |HGNC=20982 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-103bp_to_ENST00000491455_5end | |||
|cluster_id=chr1:214454320..214454341,+ | |||
|description=CAGE_peak_4_at_SMYD2_5end | |||
|id=chr1:214454320..214454341,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!9.21e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;4.81e-10;20!UBERON:0002619;9.13e-09;22!UBERON:0000200;1.13e-07;6!UBERON:0000956;3.05e-07;25!UBERON:0000203;3.05e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.31e-10,20;UBERON:0002619,2.87e-09,22;UBERON:0000200,8.20e-08,6;UBERON:0000956,1.14e-07,25;UBERON:0000203,1.14e-07,25;UBERON:0005631,5.52e-07,14;UBERON:0000158,5.52e-07,14;UBERON:0001869,5.92e-07,32 | |||
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| ||
|short_description=p4@SMYD2 | |||
}} | }} |
Latest revision as of 01:45, 25 September 2015
Short description: | p4@SMYD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SMYD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -103bp_to_ENST00000491455_5end |
EntrezGene: | SMYD2 |
HGNC: | 20982 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 1.31e-10 | 20 |
regional part of cerebral cortex | 2.87e-09 | 22 |
gyrus | 8.20e-08 | 6 |
cerebral cortex | 1.14e-07 | 25 |
pallium | 1.14e-07 | 25 |
extraembryonic membrane | 5.52e-07 | 14 |
membranous layer | 5.52e-07 | 14 |
cerebral hemisphere | 5.92e-07 | 32 |