FFCP PHASE1:Hg19::chr1:206945673..206945712,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:206945673..206945712,- to FFCP PHASE1:Hg19::chr1:206945673..206945712,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3586 | |EntrezGene=3586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5962 | |HGNC=5962 | ||
|TSSclassifier=strong | |||
|UniProt=Q71UZ1 | |UniProt=Q71UZ1 | ||
|association_with_transcript=13bp_to_AF043333_5end | |||
|cluster_id=chr1:206945673..206945712,- | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_4_at_IL10_5end | |||
|id=chr1:206945673..206945712,- | |||
|ontology_enrichment_celltype=CL:0002194!8.33e-47!63;CL:0000576!8.33e-47!63;CL:0000040!8.33e-47!63;CL:0000559!8.33e-47!63;CL:0002009!7.72e-45!65;CL:0000766!1.65e-41!76;CL:0000839!2.04e-40!70;CL:0000557!1.32e-39!71;CL:0002057!3.25e-39!42;CL:0000860!1.03e-35!45;CL:0002087!4.31e-34!119;CL:0000738!1.18e-30!140;CL:0002031!2.28e-29!124;CL:0000763!1.53e-22!112;CL:0000049!1.53e-22!112;CL:0000988!1.99e-21!182;CL:0000037!5.41e-21!172;CL:0000566!5.41e-21!172;CL:0002032!5.01e-20!165;CL:0000837!5.01e-20!165 | |||
|ontology_enrichment_celltype_v019=CL:0000473;9.99e-78;39!CL:0000234;9.99e-78;39!CL:0000860;2.30e-69;33!CL:0002057;2.30e-69;33!CL:0000576;1.46e-46;48!CL:0000766;2.29e-33;69!CL:0000235;1.65e-24;6!CL:0000763;3.09e-15;100!CL:0000738;1.37e-13;136!CL:0002619;2.88e-13;3!CL:0002087;1.85e-12;104!CL:0000988;8.44e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,1.57e-88,59;CL:0000576,1.57e-88,59;CL:0000040,1.57e-88,59;CL:0000559,1.57e-88,59;CL:0002009,2.23e-85,61;CL:0000473,4.20e-84,48;CL:0000234,4.20e-84,48;CL:0000839,2.56e-78,66;CL:0000557,4.96e-77,67;CL:0000766,4.43e-75,72;CL:0000860,3.20e-63,42;CL:0002057,3.20e-63,42;CL:0002087,1.93e-54,115;CL:0002031,3.40e-49,120;CL:0000763,3.47e-47,108;CL:0000049,3.47e-47,108;CL:0000738,6.03e-47,136;CL:0002032,3.39e-36,161;CL:0000837,3.39e-36,161;CL:0000037,3.66e-36,168;CL:0000988,1.33e-35,177;CL:0000235,1.62e-24,6;CL:0002619,2.88e-13,3;CL:0000134,8.20e-13,354;CL:0002320,2.28e-12,361;CL:0000219,8.39e-11,386;CL:0000048,6.83e-09,427;CL:0000723,1.25e-08,433;CL:0000034,2.73e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.59e-49;42!CL:0000049;6.49e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.98e-39!102;UBERON:0003061!4.98e-39!102;UBERON:0002193!1.97e-36!112;UBERON:0002371!8.60e-35!80;UBERON:0001474!3.56e-31!86;UBERON:0002405!2.88e-28!115;UBERON:0007023!1.34e-27!115;UBERON:0004765!1.87e-26!101;UBERON:0001434!1.87e-26!101;UBERON:0003081!8.28e-13!216;UBERON:0002204!1.61e-11!167;UBERON:0000062!7.53e-09!511;UBERON:0001049!7.22e-08!57;UBERON:0005068!7.22e-08!57;UBERON:0006241!7.22e-08!57;UBERON:0007135!7.22e-08!57;UBERON:0002298!7.98e-07!8 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.99e-67,76;UBERON:0002390,6.31e-62,98;UBERON:0003061,6.31e-62,98;UBERON:0001474,1.93e-61,82;UBERON:0002405,2.22e-59,93;UBERON:0002193,2.37e-55,108;UBERON:0004765,3.15e-55,90;UBERON:0001434,7.62e-49,100;UBERON:0003081,4.75e-28,203;UBERON:0002204,1.11e-25,167;UBERON:0000926,1.72e-15,315;UBERON:0004120,1.72e-15,315;UBERON:0006603,1.72e-15,315;UBERON:0002384,9.22e-12,371 | |||
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| ||
|short_description=p4@IL10 | |||
}} | }} |
Latest revision as of 05:55, 20 September 2015
Short description: | p4@IL10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL10_5end |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | 13bp_to_AF043333_5end |
EntrezGene: | IL10 |
HGNC: | 5962 |
UniProt: | Q71UZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 1.57e-88 | 59 |
monocyte | 1.57e-88 | 59 |
monoblast | 1.57e-88 | 59 |
promonocyte | 1.57e-88 | 59 |
macrophage dendritic cell progenitor | 2.23e-85 | 61 |
defensive cell | 4.20e-84 | 48 |
phagocyte | 4.20e-84 | 48 |
myeloid lineage restricted progenitor cell | 2.56e-78 | 66 |
granulocyte monocyte progenitor cell | 4.96e-77 | 67 |
myeloid leukocyte | 4.43e-75 | 72 |
classical monocyte | 3.20e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.20e-63 | 42 |
nongranular leukocyte | 1.93e-54 | 115 |
hematopoietic lineage restricted progenitor cell | 3.40e-49 | 120 |
myeloid cell | 3.47e-47 | 108 |
common myeloid progenitor | 3.47e-47 | 108 |
leukocyte | 6.03e-47 | 136 |
hematopoietic oligopotent progenitor cell | 3.39e-36 | 161 |
hematopoietic multipotent progenitor cell | 3.39e-36 | 161 |
hematopoietic stem cell | 3.66e-36 | 168 |
hematopoietic cell | 1.33e-35 | 177 |
macrophage | 1.62e-24 | 6 |
adult endothelial progenitor cell | 2.88e-13 | 3 |
mesenchymal cell | 8.20e-13 | 354 |
connective tissue cell | 2.28e-12 | 361 |
motile cell | 8.39e-11 | 386 |
multi fate stem cell | 6.83e-09 | 427 |
somatic stem cell | 1.25e-08 | 433 |
stem cell | 2.73e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.99e-67 | 76 |
hematopoietic system | 6.31e-62 | 98 |
blood island | 6.31e-62 | 98 |
bone element | 1.93e-61 | 82 |
immune system | 2.22e-59 | 93 |
hemolymphoid system | 2.37e-55 | 108 |
skeletal element | 3.15e-55 | 90 |
skeletal system | 7.62e-49 | 100 |
lateral plate mesoderm | 4.75e-28 | 203 |
musculoskeletal system | 1.11e-25 | 167 |
mesoderm | 1.72e-15 | 315 |
mesoderm-derived structure | 1.72e-15 | 315 |
presumptive mesoderm | 1.72e-15 | 315 |
connective tissue | 9.22e-12 | 371 |