FFCP PHASE1:Hg19::chr1:203596080..203596091,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:203596080..203596091,+ to FFCP PHASE1:Hg19::chr1:203596080..203596091,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=493 | |EntrezGene=493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=817 | |HGNC=817 | ||
|TSSclassifier=strong | |||
|UniProt=P23634 | |UniProt=P23634 | ||
|association_with_transcript=152bp_to_ENST00000367218,ENST00000367219,ENST00000391954,uc001gzv.2,uc001gzw.2_5end | |||
|cluster_id=chr1:203596080..203596091,+ | |||
|description=CAGE_peak_7_at_ATP2B4_5end | |||
|id=chr1:203596080..203596091,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.51e-09!180;CL:0000057!1.80e-07!75;CL:0000680!4.99e-07!57;CL:0000056!4.99e-07!57;CL:0000355!4.99e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.52e-19!115;UBERON:0001049!1.39e-12!57;UBERON:0005068!1.39e-12!57;UBERON:0006241!1.39e-12!57;UBERON:0007135!1.39e-12!57;UBERON:0000955!2.02e-11!69;UBERON:0006238!2.02e-11!69;UBERON:0001017!2.74e-11!82;UBERON:0002020!5.70e-11!34;UBERON:0003528!5.70e-11!34;UBERON:0002616!7.51e-11!59;UBERON:0005743!9.04e-11!86;UBERON:0002780!9.16e-11!41;UBERON:0001890!9.16e-11!41;UBERON:0006240!9.16e-11!41;UBERON:0001893!9.88e-11!34;UBERON:0002791!1.64e-10!33;UBERON:0000475!1.80e-10!365;UBERON:0003080!4.72e-10!42;UBERON:0000073!5.82e-10!94;UBERON:0001016!5.82e-10!94;UBERON:0001869!8.31e-10!32;UBERON:0003075!2.48e-09!86;UBERON:0007284!2.48e-09!86;UBERON:0004121!2.72e-09!169;UBERON:0000153!4.43e-09!129;UBERON:0007811!4.43e-09!129;UBERON:0000914!7.10e-09!83;UBERON:0002329!7.10e-09!83;UBERON:0003077!7.10e-09!83;UBERON:0003059!7.10e-09!83;UBERON:0007282!7.10e-09!83;UBERON:0009618!7.10e-09!83;UBERON:0007285!7.10e-09!83;UBERON:0000033!1.99e-08!123;UBERON:0000924!2.61e-08!173;UBERON:0006601!2.61e-08!173;UBERON:0002346!6.23e-08!90;UBERON:0000481!6.44e-08!347;UBERON:0004290!8.48e-08!70;UBERON:0002385!1.18e-07!63;UBERON:0001015!1.18e-07!63;UBERON:0000383!1.18e-07!63;UBERON:0000956!3.99e-07!25;UBERON:0000203!3.99e-07!25;UBERON:0000486!4.73e-07!82;UBERON:0001134!6.20e-07!61;UBERON:0002036!6.20e-07!61;UBERON:0003082!6.20e-07!61;UBERON:0002619!8.39e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.85e-09;34!UBERON:0002020;2.85e-09;34!UBERON:0001893;3.69e-09;34!UBERON:0002791;9.62e-09;32!UBERON:0001869;1.83e-08;32!UBERON:0002780;2.91e-07;41!UBERON:0001890;2.91e-07;41!UBERON:0002420;3.28e-07;9!UBERON:0007245;3.28e-07;9!UBERON:0010009;3.28e-07;9!UBERON:0010011;3.28e-07;9!UBERON:0000454;3.28e-07;9!UBERON:0000125;5.23e-07;9!UBERON:0002308;5.23e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.34e-18,114;UBERON:0001049,6.91e-13,56;UBERON:0005068,6.91e-13,56;UBERON:0006241,6.91e-13,56;UBERON:0007135,6.91e-13,56;UBERON:0003528,2.16e-11,34;UBERON:0002020,2.16e-11,34;UBERON:0000073,3.10e-11,53;UBERON:0002616,3.10e-11,53;UBERON:0001017,3.19e-11,81;UBERON:0001893,4.14e-11,34;UBERON:0000955,8.23e-11,68;UBERON:0006238,8.23e-11,68;UBERON:0002780,1.98e-10,41;UBERON:0001890,1.98e-10,41;UBERON:0003080,1.98e-10,41;UBERON:0006240,1.98e-10,41;UBERON:0002791,3.33e-10,32;UBERON:0001016,4.27e-10,89;UBERON:0001869,5.86e-10,32;UBERON:0003075,7.65e-08,82;UBERON:0007284,7.65e-08,82;UBERON:0002385,2.83e-07,64;UBERON:0001015,2.83e-07,64;UBERON:0000383,2.83e-07,64;UBERON:0002420,3.35e-07,9;UBERON:0007245,3.35e-07,9;UBERON:0010009,3.35e-07,9;UBERON:0010011,3.35e-07,9;UBERON:0000454,3.35e-07,9;UBERON:0000125,5.61e-07,9;UBERON:0002308,5.61e-07,9;UBERON:0002346,7.21e-07,86 | |||
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|phase1_expression=0.181678379270557,2.14100523890983,0.704772020479856,0,0,0,0,4.42203911398782,1.56711376919903,1.72013755551056,0,1.74753097704138,2.37390280405608,4.45558870656168,2.31978163009541,2.6893005858071,3.01347264011988,3.65155045193687,4.87932798790507,0.492484232307152,0.204000691244253,0.313454721478088,0.85870796139317,1.77936752594749,1.38096903554283,0.0764134057479513,0,0,0.393364276848904,3.0706351847777,0.154816123316076,0,0.30120591877825,0,0,0,0.587200878669695,0,0.802177789880567,0.217010870715852,0,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0,0,0,0,0,0.564727018627814,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0.889509253863555,0,0.400395987036012,0,0.661044872784862,0,0,0,0,1.32171328579026,1.12101712596307,0.263384084775077,0.786839080455332,0.786021525498329,0.616804496998528,0.334372990781356,0.32592226663359,0,0,2.67385096524417,1.76763544484902,1.32920336750173,2.43723477388514,1.15282187753108,1.69077151827842,0.328875809207352,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,1.04535523804977,1.69964014046349,1.91610246800961,1.71813722741315,1.51811815211702,1.59282707162048,1.95325036156926,0.950452044448374,1.20460095262218,2.04778577847069,0,2.36777252044017,3.28451198768419,2.01606743224732,3.20928234940209,1.44824403882799,4.87613732627923,0,0.383587685530591,2.53007406669196,2.00535164254356,4.05570253090306,0,3.89307896242109,0.756278537312543,0,0.263504357079378,2.61958150995425,0,0.370784442784429,0.649094787309367,0.696518949197069,0.664789802594326,0,0,0,0,0,0,0.56530794192401,0,0.825354125820202,0.208994966536811,0.775250277507987,1.06729878806013,0.66944122552934,0,0,0.488124115096339,0,0,0.0892997282840798,0.44905874525234,0.112611480483322,0,0,0.549605231791222,0,0,0.872188104285069,1.49091585508596,1.77282716330412,15.0946466127069,6.59724227722272,4.25602058638028,1.68203280042692,0,0.24666754841716,2.8008993185979,0.808264032418128,0.326923806226917,0.454072282934794,1.15235184896,0.70296429550139,1.5608003841516,0.570471821544449,0.747243402759005,0.704606991862589,0.971237666208789,0.702254033511242,1.22492502752936,0.368502951935304,2.27316718586684,2.37600571456411,1.97813543422845,0,0,0.336672227908132,1.00094815897571,2.21651292387346,1.31693286264251,3.98434134538726,2.25357088359895,0.680593098960126,4.84352016359927,2.13557388818567,3.17897851739343,5.10154863343484,1.64884046781502,1.54584324027377,1.30281799432113,9.78902726999344,1.85130309806277,5.04867548488229,3.40584624976508,3.23292113637624,7.10019185033229,3.42557133973977,4.74769658469365,0.773043412653187,0.272746120590835,0.860413786167011,0.243947412259191,0,0,0.518305275076852,0.252320850875628,0,1.56449532329816,1.92972281457866,2.76269842704961,4.64367928031979,8.66255378003503,0,0,0.241011029883482,0,0.871517776369625,0,0,0.196221465125346,0,0,0,1.2347220339942,0,0,0,0,0.882926198829301,0,0.686271241194102,0.878002283269004,0,0.301586917234893,0.833296006426766,0.325808305310325,0,0,0.34779121492523,0.234817388471643,0,0.462985512576611,0,0,0,0,0,0,0,1.00789276919316,0,0.985143749731331,0.581267877027924,0,0.492663237895943,0.088048434013226,0,0,0.25248486685276,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.517086863031111,10.7296933755565,3.381211010224,0.797814349754612,2.08014873822732,0.514414748524284,0,0.799266537048298,1.42977993658148,2.71310802695722,0.823240336780769,0.65147236858747,0.710783897485092,0.791951872933429,10.8518175741451,6.97226766880235,5.29856853264902,0,0,0,2.63587341040741,4.59447743336456,4.27910715122155,1.88215698667853,1.02738161275192,1.07436577943937,0.224170287987055,1.97030760201927,1.94064817373566,1.15508732651774,1.52456774533478,0,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,3.92612773501248,1.00034104211935,1.62759014219841,1.45579603071565,2.67643483195743,0.946214490203608,3.5142424497814,1.20378439891088,0,1.03473071292505,1.32845119707087,2.02806085395873,5.47366771148922,0,0,0.206768026122887,0,1.49418580924822,0.303127571446259,0,0.604780586659361,0.496215615637554,0.61384789315225,0.280660094433074,0.768834895534206,2.04682899626681,0.804269605718038,0,1.23367755042124,1.06537035187876,2.87445046048332,2.59627214591811,1.85936605535935,0,0,0.0920809889358963,1.26295892981067,0.546273504020151,0.655622074797121,0,0.308061348417659,1.56869953835371,0,0.527758144464379,0,0.510281115829547,0.647747748306418,1.54227252690289,0,1.00337954770971,0,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0.976135183992909,0.721287081534056,0,0.082509499920588,0,0,1.6068392984416,0.676695028044854,1.07834031980251,1.38153307253517,0.551346289938122,2.68550612170684,2.90033387828457,1.02271952899321,0.534192213880424,0.165284915360978,0,0,0.50578890427775,0.464845549297286,5.66662224295152,1.3940745403212,1.54016790088044,2.12922412126809,0,1.111945314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| ||
|short_description=p7@ATP2B4 | |||
}} | }} |
Latest revision as of 23:33, 19 September 2015
Short description: | p7@ATP2B4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ATP2B4_5end |
Coexpression cluster: | NA |
Association with transcript: | 152bp_to_ENST00000367218, ENST00000367219, ENST00000391954, uc001gzv.2, uc001gzw.2_5end |
EntrezGene: | ATP2B4 |
HGNC: | 817 |
UniProt: | P23634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.34e-18 | 114 |
neural tube | 6.91e-13 | 56 |
neural rod | 6.91e-13 | 56 |
future spinal cord | 6.91e-13 | 56 |
neural keel | 6.91e-13 | 56 |
brain grey matter | 2.16e-11 | 34 |
gray matter | 2.16e-11 | 34 |
regional part of nervous system | 3.10e-11 | 53 |
regional part of brain | 3.10e-11 | 53 |
central nervous system | 3.19e-11 | 81 |
telencephalon | 4.14e-11 | 34 |
brain | 8.23e-11 | 68 |
future brain | 8.23e-11 | 68 |
regional part of forebrain | 1.98e-10 | 41 |
forebrain | 1.98e-10 | 41 |
anterior neural tube | 1.98e-10 | 41 |
future forebrain | 1.98e-10 | 41 |
regional part of telencephalon | 3.33e-10 | 32 |
nervous system | 4.27e-10 | 89 |
cerebral hemisphere | 5.86e-10 | 32 |
neural plate | 7.65e-08 | 82 |
presumptive neural plate | 7.65e-08 | 82 |
muscle tissue | 2.83e-07 | 64 |
musculature | 2.83e-07 | 64 |
musculature of body | 2.83e-07 | 64 |
basal ganglion | 3.35e-07 | 9 |
nuclear complex of neuraxis | 3.35e-07 | 9 |
aggregate regional part of brain | 3.35e-07 | 9 |
collection of basal ganglia | 3.35e-07 | 9 |
cerebral subcortex | 3.35e-07 | 9 |
neural nucleus | 5.61e-07 | 9 |
nucleus of brain | 5.61e-07 | 9 |
neurectoderm | 7.21e-07 | 86 |