FFCP PHASE1:Hg19::chr1:201708421..201708439,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:201708421..201708439,+ to FFCP PHASE1:Hg19::chr1:201708421..201708439,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89796 | |EntrezGene=89796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15989 | |HGNC=15989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000490213_5end | |||
|cluster_id=chr1:201708421..201708439,+ | |||
|description=CAGE_peak_7_at_NAV1_5end | |||
|id=chr1:201708421..201708439,+ | |||
|ontology_enrichment_celltype=CL:0000359!5.32e-10!32;CL:0000055!1.66e-07!180;CL:0000192!2.48e-07!42;CL:0000514!2.48e-07!42;CL:0002321!7.20e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.32e-10;32!CL:0000244;6.75e-07;4!CL:0000731;6.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.92e-10,32;CL:0000244,6.82e-07,4;CL:0000731,6.82e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.71e-19!312;UBERON:0000475!8.30e-19!365;UBERON:0000483!1.79e-18!309;UBERON:0000025!5.01e-15!194;UBERON:0004111!2.01e-12!241;UBERON:0000477!4.07e-12!286;UBERON:0003075!2.54e-11!86;UBERON:0007284!2.54e-11!86;UBERON:0003914!4.25e-11!118;UBERON:0000033!2.08e-10!123;UBERON:0002346!6.14e-10!90;UBERON:0003103!1.49e-09!69;UBERON:0000481!1.49e-09!347;UBERON:0000153!1.66e-09!129;UBERON:0007811!1.66e-09!129;UBERON:0007100!1.99e-09!27;UBERON:0004872!2.67e-09!84;UBERON:0004121!2.81e-09!169;UBERON:0002049!4.07e-09!79;UBERON:0007798!4.07e-09!79;UBERON:0001637!4.79e-09!42;UBERON:0003509!4.79e-09!42;UBERON:0004572!4.79e-09!42;UBERON:0001009!5.81e-09!113;UBERON:0002616!9.11e-09!59;UBERON:0000924!1.88e-08!173;UBERON:0006601!1.88e-08!173;UBERON:0004573!2.45e-08!33;UBERON:0004571!2.45e-08!33;UBERON:0002200!3.56e-08!11;UBERON:0006876!3.56e-08!11;UBERON:0000064!4.21e-08!219;UBERON:0000948!4.87e-08!24;UBERON:0005498!4.87e-08!24;UBERON:0004140!4.87e-08!24;UBERON:0009881!4.87e-08!24;UBERON:0004141!4.87e-08!24;UBERON:0003084!4.87e-08!24;UBERON:0007005!4.87e-08!24;UBERON:0004139!4.87e-08!24;UBERON:0004291!4.87e-08!24;UBERON:0004535!4.95e-08!110;UBERON:0003056!6.76e-08!61;UBERON:0000468!7.32e-08!659;UBERON:0005743!5.13e-07!86;UBERON:0001049!7.45e-07!57;UBERON:0005068!7.45e-07!57;UBERON:0006241!7.45e-07!57;UBERON:0007135!7.45e-07!57;UBERON:0001981!8.71e-07!60;UBERON:0007500!8.71e-07!60;UBERON:0004537!8.71e-07!60;UBERON:0006965!8.71e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;1.43e-12;11!UBERON:0004573;5.34e-09;33!UBERON:0004571;5.34e-09;33!UBERON:0010371;8.26e-09;31!UBERON:0007100;1.20e-08;25!UBERON:0002203;4.38e-08;6!UBERON:0001768;4.38e-08;6!UBERON:0002200;4.38e-08;6!UBERON:0001637;1.70e-07;42!UBERON:0003509;1.70e-07;42!UBERON:0004572;1.70e-07;42!UBERON:0000365;1.84e-07;5!UBERON:0003688;4.28e-07;6!UBERON:0002358;4.28e-07;6!UBERON:0003684;4.28e-07;6!UBERON:0001178;4.28e-07;6!UBERON:0007625;7.56e-07;11!UBERON:0000948;8.90e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001009,2.41e-13,112;UBERON:0006876,2.20e-12,11;UBERON:0004535,7.72e-12,109;UBERON:0002049,1.57e-11,78;UBERON:0007798,1.57e-11,78;UBERON:0000119,5.50e-11,309;UBERON:0003914,1.07e-10,117;UBERON:0004573,1.84e-10,33;UBERON:0004571,1.84e-10,33;UBERON:0000483,2.24e-10,306;UBERON:0007100,3.39e-10,27;UBERON:0004872,5.32e-10,83;UBERON:0001637,1.04e-09,42;UBERON:0003509,1.04e-09,42;UBERON:0004572,1.04e-09,42;UBERON:0000025,9.80e-09,192;UBERON:0000948,3.77e-08,24;UBERON:0005498,3.77e-08,24;UBERON:0004140,3.77e-08,24;UBERON:0009881,3.77e-08,24;UBERON:0004141,3.77e-08,24;UBERON:0003084,3.77e-08,24;UBERON:0007005,3.77e-08,24;UBERON:0004139,3.77e-08,24;UBERON:0004291,3.77e-08,24;UBERON:0002203,3.90e-08,6;UBERON:0001768,3.90e-08,6;UBERON:0002200,3.90e-08,6;UBERON:0010314,2.14e-07,132;UBERON:0000365,2.32e-07,5;UBERON:0007500,2.75e-07,59;UBERON:0001981,2.75e-07,59;UBERON:0004537,2.75e-07,59;UBERON:0006965,2.75e-07,59;UBERON:0003103,5.00e-07,68;UBERON:0007625,5.12e-07,11;UBERON:0003688,5.31e-07,6;UBERON:0002358,5.31e-07,6;UBERON:0003684,5.31e-07,6;UBERON:0001178,5.31e-07,6 | |||
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| ||
|short_description=p7@NAV1 | |||
}} | }} |
Latest revision as of 18:45, 19 September 2015
Short description: | p7@NAV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NAV1_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000490213_5end |
EntrezGene: | NAV1 |
HGNC: | 15989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.92e-10 | 32 |
transitional epithelial cell | 6.82e-07 | 4 |
urothelial cell | 6.82e-07 | 4 |