FFCP PHASE1:Hg19::chr1:186344904..186344925,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:186344904..186344925,+ to FFCP PHASE1:Hg19::chr1:186344904..186344925,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54953 | |EntrezGene=54953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24299 | |HGNC=24299 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFR7,C9JPX4,Q5SWX8,B4DNY0 | |UniProt=E9PFR7,C9JPX4,Q5SWX8,B4DNY0 | ||
|association_with_transcript=14bp_to_ENST00000367470,ENST00000419367,ENST00000432021,NM_001164245,NM_001164246,NM_017847,uc001grw.2,uc010poq.1,uc010por.1_5end | |||
|cluster_id=chr1:186344904..186344925,+ | |||
|coexpression_cluster_id=C3402 | |||
|description=CAGE_peak_2_at_C1orf27_5end | |||
|id=chr1:186344904..186344925,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.88e-23!53;CL:0000051!2.88e-23!53;CL:0000838!1.09e-22!52;CL:0000037!9.02e-19!172;CL:0000566!9.02e-19!172;CL:0000738!6.63e-18!140;CL:0000988!8.55e-17!182;CL:0002032!2.13e-16!165;CL:0000837!2.13e-16!165;CL:0002031!4.96e-15!124;CL:0002087!1.43e-13!119;CL:0000791!6.07e-12!18;CL:0000789!6.07e-12!18;CL:0002420!6.07e-12!18;CL:0002419!6.07e-12!18;CL:0000790!6.07e-12!18;CL:0000084!8.83e-12!25;CL:0000827!8.83e-12!25;CL:0000945!2.34e-10!24;CL:0000826!2.34e-10!24;CL:0000625!2.78e-08!11;CL:0000236!5.29e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.03e-17;53!CL:0000791;1.05e-15;18!CL:0000789;1.05e-15;18!CL:0002419;1.05e-15;18!CL:0000084;3.63e-15;25!CL:0000945;1.42e-12;24!CL:0000625;7.43e-11;11!CL:0000236;2.92e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,5.38e-30,53;CL:0000051,5.38e-30,53;CL:0000838,3.28e-29,52;CL:0000738,2.96e-20,136;CL:0000037,9.29e-20,168;CL:0000988,1.98e-19,177;CL:0002032,3.65e-17,161;CL:0000837,3.65e-17,161;CL:0002031,5.96e-17,120;CL:0000791,9.70e-16,18;CL:0000789,9.70e-16,18;CL:0002420,9.70e-16,18;CL:0002419,9.70e-16,18;CL:0000790,9.70e-16,18;CL:0002087,1.67e-15,115;CL:0000084,2.86e-15,25;CL:0000827,2.86e-15,25;CL:0000945,1.18e-12,24;CL:0000826,1.18e-12,24;CL:0000625,9.62e-11,11;CL:0000236,4.80e-09,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.03e-17;53!CL:0000790;1.05e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.84e-07;15!UBERON:0000179;1.84e-07;15!UBERON:0000463;1.84e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.90e-07,15;UBERON:0000179,2.90e-07,15;UBERON:0000463,2.90e-07,15 | |||
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| ||
|short_description=p2@C1orf27 | |||
}} | }} |
Latest revision as of 08:03, 19 September 2015
Short description: | p2@C1orf27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C1orf27_5end |
Coexpression cluster: | C3402_CD8_CD4_diffuse_non_cord_CD19_b |
Association with transcript: | 14bp_to_ENST00000367470, ENST00000419367, ENST00000432021, NM_001164245, NM_001164246, NM_017847, uc001grw.2, uc010poq.1, uc010por.1_5end |
EntrezGene: | C1orf27 |
HGNC: | 24299 |
UniProt: | E9PFR7C9JPX4Q5SWX8B4DNY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 5.38e-30 | 53 |
common lymphoid progenitor | 5.38e-30 | 53 |
lymphoid lineage restricted progenitor cell | 3.28e-29 | 52 |
leukocyte | 2.96e-20 | 136 |
hematopoietic stem cell | 9.29e-20 | 168 |
hematopoietic cell | 1.98e-19 | 177 |
hematopoietic oligopotent progenitor cell | 3.65e-17 | 161 |
hematopoietic multipotent progenitor cell | 3.65e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 5.96e-17 | 120 |
mature alpha-beta T cell | 9.70e-16 | 18 |
alpha-beta T cell | 9.70e-16 | 18 |
immature T cell | 9.70e-16 | 18 |
mature T cell | 9.70e-16 | 18 |
immature alpha-beta T cell | 9.70e-16 | 18 |
nongranular leukocyte | 1.67e-15 | 115 |
T cell | 2.86e-15 | 25 |
pro-T cell | 2.86e-15 | 25 |
lymphocyte of B lineage | 1.18e-12 | 24 |
pro-B cell | 1.18e-12 | 24 |
CD8-positive, alpha-beta T cell | 9.62e-11 | 11 |
B cell | 4.80e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 2.90e-07 | 15 |
haemolymphatic fluid | 2.90e-07 | 15 |
organism substance | 2.90e-07 | 15 |