FFCP PHASE1:Hg19::chr1:17531614..17531630,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr1:17531614..17531630,+ to FFCP PHASE1:Hg19::chr1:17531614..17531630,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29943 | |EntrezGene=29943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18367 | |HGNC=18367 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULC6 | |UniProt=Q9ULC6 | ||
|association_with_transcript=0bp_to_ENST00000375471,NM_013358,uc001bah.1_5end | |||
|cluster_id=chr1:17531614..17531630,+ | |||
|description=CAGE_peak_1_at_PADI1_5end | |||
|id=chr1:17531614..17531630,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.47e-24!43;CL:0000066!8.07e-21!254;CL:0000223!5.62e-20!59;CL:0002368!4.73e-10!13;CL:0002149!8.83e-10!6;CL:0002255!8.83e-10!6;CL:0002251!6.77e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002149;1.44e-13;6!CL:0002255;1.44e-13;6!CL:0002541;1.14e-11;3!CL:0002076;3.15e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.20e-13,6;CL:0002255,1.20e-13,6;CL:0002541,1.13e-11,3;CL:0000223,9.30e-11,58;CL:0002076,2.98e-10,42;CL:0000066,6.91e-08,253 | |||
|ontology_enrichment_development_v019=CL:0000223;2.73e-08;58 | |||
|ontology_enrichment_disease=DOID:305!8.23e-12!106;DOID:3001!8.83e-10!6;DOID:0050687!1.19e-09!143;DOID:299!4.39e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:299;8.50e-15;25!DOID:3001;1.44e-13;6!DOID:4929;2.87e-08;2!DOID:120;9.16e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:299,8.15e-15,25;DOID:3001,1.20e-13,6;DOID:4929,2.82e-08,2;DOID:305,4.13e-08,106;DOID:120,8.66e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.48e-15!169;UBERON:0000925!7.48e-15!169;UBERON:0006595!7.48e-15!169;UBERON:0001007!3.93e-11!155;UBERON:0001555!3.93e-11!155;UBERON:0007026!3.93e-11!155;UBERON:0000077!1.11e-10!130;UBERON:0000161!3.47e-10!35;UBERON:0001004!4.56e-10!72;UBERON:0004921!3.58e-09!129;UBERON:0004185!3.58e-09!129;UBERON:0000464!4.36e-09!104;UBERON:0000466!1.16e-08!126;UBERON:0003975!2.68e-08!22;UBERON:0000065!2.79e-08!53;UBERON:0005156!3.60e-08!59;UBERON:0000990!3.60e-08!59;UBERON:0005795!4.14e-08!22;UBERON:0005911!1.02e-07!82;UBERON:0003134!1.51e-07!37;UBERON:0000474!1.51e-07!37;UBERON:0001041!2.08e-07!98;UBERON:0003133!2.76e-07!48;UBERON:0000995!2.86e-07!21;UBERON:0000166!4.08e-07!21;UBERON:0004175!6.02e-07!25;UBERON:0001008!6.62e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.14e-11;3!UBERON:0000920;1.14e-11;3!UBERON:0003975;2.01e-10;18!UBERON:0003134;1.02e-09;33!UBERON:0000474;3.03e-09;37!UBERON:0005631;4.85e-09;10!UBERON:0000158;4.85e-09;10!UBERON:0004175;9.46e-09;21!UBERON:0002394;1.17e-08;4!UBERON:0003928;1.17e-08;4!UBERON:0000995;1.54e-08;17!UBERON:0002294;2.13e-08;7!UBERON:0001173;2.13e-08;7!UBERON:0000341;4.31e-08;2!UBERON:0003127;9.88e-08;2!UBERON:0003100;1.01e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.13e-11,3;UBERON:0003975,1.32e-10,22;UBERON:0003134,1.48e-10,37;UBERON:0000474,1.48e-10,37;UBERON:0003100,2.81e-09,41;UBERON:0004175,3.86e-09,25;UBERON:0000995,7.78e-09,21;UBERON:0005631,7.97e-09,14;UBERON:0000158,7.97e-09,14;UBERON:0003124,1.86e-08,7;UBERON:0005795,2.25e-08,22;UBERON:0000341,4.46e-08,2;UBERON:0003127,9.55e-08,2;UBERON:0003133,1.46e-07,48;UBERON:0004119,5.34e-07,160;UBERON:0000925,5.34e-07,160;UBERON:0006595,5.34e-07,160;UBERON:0005156,7.45e-07,59;UBERON:0000990,7.45e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0.919421224478927,0.90361775633475,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26479403160043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0.272746120590835,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,16.9429019642049,0,0,0,7.670393419426,1.15523005656622,0,0,0.211103257785751,0,0,0,0,0,0,12.2340611061618,21.6079762321468,0.671624264166535,0,0,0,0.328014645699706,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0.192190067365106,0.893288987462089,1.51736671283325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,2.68120910214315,0,1.03558180854457,0.43050537267123,0,6.65145230305014,1.1486170010348,0,0,0,0,0,0,0,0,0,0,3.67560323971548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0.568272293612826,64.9384998486517,0.890894042497916,60.817819015648,0,0,0.111308705022906,0,0,0.597743964753209,0,0,0,0,0,21.4785359242111,9.48812225780729,0,2.26879832964947,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0,0,0,0,0,0,1.25481369850743,5.61736887077719,0,0,4.48788222048861,0,39.556143806758,7.60260025235457,68.2284513303852,0,0,0,0,0,0,0,0,0,219.548126974054,0,0,0,0,0,0,0,0,0,0,0,0,4.30462161650597,0,0,0,0,0,0,0,0,0,0,0,11.3843818411917,1.66409607615766,0.173559738335131,2.05784034570193,0.522355239482415,0,0.51595809741485,0,0,0,83.022598114087,0,1.58186518546373,0.137041924646751,0,0,0.195551382734803,16.1119228705583,0,0,0,0,0,0.576219191952599,0.372757606696298,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0.77380195455795,0,2.34804281319486,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2107455132835,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.30924491143255,0,0,0,0.226705925512272,0,0,0.895444205407437,2.47041157728778,0.438568099157414,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,189.33566252933,0,0,0,0,0,1.53867458491389,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10057159113007,0.115525666150338,0,0,0,0.0752103283492573,0,0,0,0,11.8284868973636,0,0,0,0,0,0,0.992422356778588,0.175871244359621,0.511049710558381,0,0,0,0,7.45099909366166,0,4.6301762548103,0,0,0.590969204419841,0,0.078493092850514,0,0.280272163313789,0,12.9556554731173,0,0.0714765441766563,0,0,0,0,0.62164849248911,1.19502933965765,2.76503864725637,0.860454717640555,0,0,0,1.14553434272025,12.4082554265728,1.91107787795487,124.383240159145,2.65005630761156,0,0,0,0,2.91426595835484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534434810531121,0.0918948995348449,0,0,0,0,0,197.241433258407,2.3806443146374,0.129177819672012,0.186224142887574,0.33639558774184,0,0,24.1665590165627,5.13349951627922,101.16278362791,17.285051499635,1.33064142618405,0.325613074443898,0,0,37.3672840763401,0,0.611207220914332,0.406896178315738,3.99454064511308,0,0 | 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| ||
|short_description=p1@PADI1 | |||
}} | }} |
Latest revision as of 19:52, 18 September 2015
Short description: | p1@PADI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PADI1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000375471, NM_013358, uc001bah.1_5end |
EntrezGene: | PADI1 |
HGNC: | 18367 |
UniProt: | Q9ULC6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.20e-13 | 6 |
stromal cell of endometrium | 1.20e-13 | 6 |
chorionic membrane mesenchymal stem cell | 1.13e-11 | 3 |
endodermal cell | 9.30e-11 | 58 |
endo-epithelial cell | 2.98e-10 | 42 |
epithelial cell | 6.91e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.13e-11 | 3 |
internal female genitalia | 1.32e-10 | 22 |
female reproductive organ | 1.48e-10 | 37 |
female reproductive system | 1.48e-10 | 37 |
female organism | 2.81e-09 | 41 |
internal genitalia | 3.86e-09 | 25 |
uterus | 7.78e-09 | 21 |
extraembryonic membrane | 7.97e-09 | 14 |
membranous layer | 7.97e-09 | 14 |
chorion | 1.86e-08 | 7 |
embryonic uterus | 2.25e-08 | 22 |
throat | 4.46e-08 | 2 |
open tracheal system trachea | 9.55e-08 | 2 |
reproductive organ | 1.46e-07 | 48 |
endoderm-derived structure | 5.34e-07 | 160 |
endoderm | 5.34e-07 | 160 |
presumptive endoderm | 5.34e-07 | 160 |
reproductive structure | 7.45e-07 | 59 |
reproductive system | 7.45e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 8.15e-15 | 25 |
female reproductive endometrioid cancer | 1.20e-13 | 6 |
tubular adenocarcinoma | 2.82e-08 | 2 |
carcinoma | 4.13e-08 | 106 |
female reproductive organ cancer | 8.66e-07 | 27 |