FFCP PHASE1:Hg19::chr1:170632907..170632916,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:170632907..170632916,+ to FFCP PHASE1:Hg19::chr1:170632907..170632916,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-130bp_to_ENST00000239461_5end | |||
|cluster_id=chr1:170632907..170632916,+ | |||
|coexpression_cluster_id=C851 | |||
|description=CAGE_peak_22_at_PRRX1_5end | |||
|id=chr1:170632907..170632916,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.48e-29!180;CL:0000057!8.98e-23!75;CL:0002620!1.00e-12!23;CL:0000680!2.43e-12!57;CL:0000056!2.43e-12!57;CL:0000355!2.43e-12!57;CL:0000187!4.26e-11!54;CL:0000183!1.74e-10!59;CL:0000393!9.69e-09!60;CL:0000211!9.69e-09!60;CL:0002334!1.61e-08!12;CL:0000048!9.46e-08!430;CL:0000723!2.56e-07!436;CL:0002494!8.70e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.41e-14;12!CL:0002620;1.61e-09;23!CL:0000057;9.00e-09;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.56e-22,76;CL:0002334,2.70e-14,12;CL:0000048,2.40e-10,427;CL:0000723,6.44e-10,433;CL:0000034,2.28e-09,441;CL:0002620,5.03e-09,23;CL:0002320,1.13e-07,361;CL:0000134,8.07e-07,354;CL:0002582,9.18e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.60e-17!83;UBERON:0002329!2.60e-17!83;UBERON:0003077!2.60e-17!83;UBERON:0003059!2.60e-17!83;UBERON:0007282!2.60e-17!83;UBERON:0009618!2.60e-17!83;UBERON:0007285!2.60e-17!83;UBERON:0004290!8.70e-15!70;UBERON:0002385!8.27e-13!63;UBERON:0001015!8.27e-13!63;UBERON:0000383!8.27e-13!63;UBERON:0001134!1.61e-12!61;UBERON:0002036!1.61e-12!61;UBERON:0003082!1.61e-12!61;UBERON:0000486!1.68e-12!82;UBERON:0000475!6.78e-11!365;UBERON:0002199!9.25e-10!45;UBERON:0002416!9.25e-10!45;UBERON:0003102!2.79e-09!95;UBERON:0002097!4.20e-08!40;UBERON:0005256!2.57e-07!143;UBERON:0000479!4.87e-07!787 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,1.22e-08,46;UBERON:0002416,1.22e-08,46;UBERON:0002384,1.64e-07,371 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.422863212287913,0,0,1.74467704820074,0,1.89515962028049,0.522371256399677,0,0.697801167972428,0,0,1.48519623552056,0,0.672325146451775,1.20538905604795,3.65155045193687,0,0.123121058076788,0,0,0,0.273748850145768,0,0.458480434487708,0.57470412614962,0.236132343941038,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.255725123687061,1.0843174571537,2.00535164254356,0.869079113764942,1.5905718941022,0.973269740605272,0,0,0,0.196468613246569,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,1.98788780678127,1.39293562831038,0.397227542439656,2.86836620748814,2.4826786753885,1.68203280042692,0,0.49333509683432,1.55605517699883,0.134710672069688,0.490385709340376,0.151357427644931,0,0.234321431833797,2.18512053781224,0.570471821544449,2.09228152772521,0.587172493218824,0.647491777472526,0.98315564691574,1.02077085627447,0.982674538494144,0.826606249406124,3.56400857184616,1.7308685049499,0,0,0.505008341862199,0.625592599359821,1.38532057742091,1.31693286264251,0.612975591598039,2.10333282469236,0.226864366320042,1.25572744982203,0.427114777637135,1.05965950579781,0.300091096084402,0.824420233907511,1.03056216018252,2.60563598864226,2.53164498361899,3.11798416515836,1.00973509697646,0.460249493211497,2.90962902273861,1.06502877754984,0.906768884048762,0.508681776931463,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.87192013766656,1.39342743059805,0.517086863031111,0,1.690605505112,0.26593811658487,0,1.28603687131071,0,0.799266537048298,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,1.4377491329495,1.14861935834114,5.70547620162874,1.44781306667579,1.02738161275192,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.10422342547226,0,0.271265023699736,2.28767947683888,2.85486382075459,0.946214490203608,1.28855556491985,1.20378439891088,0,0,3.32112799267718,0.553107505625109,1.30325421702124,0.195801157462741,1.37257369524342,0,0,0,0,0,0,1.24053903909388,3.22270143904931,1.40330047216537,0.896974044789907,2.04682899626681,1.12597744800525,0,2.15893571323718,2.13074070375753,2.62806899244189,2.59627214591811,1.51073491997947,0,0,0,0.114814448164607,0.546273504020151,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.206082023295445,0,0,0,0,0,0.96670718292122,0.770243085573222,0.307007349452259,0.551346289938122,0.644521469209642,0.145016693914229,0.93749290157711,2.1367688555217,0,0,0,0,0,0.94443704049192,0,1.54016790088044,2.12922412126809,0,1.66791797193528,0.143124886741991,0.744316738719335,0.632758849437452,0.190630193923825,0.511795582622668,1.28381696410176,3.81843897511124,0.78494864019923,0.359744915166629,0,0.235624804691373,1.41527737101321,0,0.421258456238981,0,0.487426979262569,0,1.63799893689583,0.141405431953713,0,1.10273068709225,0.66343897524122,0.438450885253763,0,0,0,0.30982349809975,0.845086807596724,0.286822704408103,0.0982490410131212,0,1.06428319221179,1.26664581178598,0.987884678879706,0.75894634753143,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0.890894042497916,0,0,0.422008249231538,0,0,0,0.398495976502139,0,0,0,1.23084805461069,1.86623752597084,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520874984799877,0.885741385813839,0.120596438625408,0,0.110579259931225,0,0.438770794307945,0,0,2.30850775511391,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0.432777279484182,0.995261931078505,0.265372693510018,0,0,0,0,0.202203398942031,1.60515529459758,0.468528891450678,0,0,0,0.394584402849391,0,0,2.65383634439649,0,0,0,0,0,0,0,1.24807205711825,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0.19871461170299,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0.407712618220842,0.418411385249333,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0.229160424011684,0,0.199679000498991,0.858452096273142,0.223171457441873,0.53746777989381,0.360299883542404,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,1.77987976358325,0.542999601753713,0,0.979762080328227,0,0,0.511164065356265,0,0,0,0.258565912723101,0.39669780522807,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0.544017803369474,0.5013797880454,0,0.655745261419609,0,0.886068179966986,0,0.250381861413,0,0.332787154610557,0.434674820589684,0,0,0,0,0,0,0.144921028610825,2.23882204330311,1.63599316893057,0.554805861502613,1.51522404220071,1.0062716070103,1.77962244319307,0.915360273587694,1.51230923763239,1.39893480524502,1.03498604992744,0.637187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| ||
|short_description=p22@PRRX1 | |||
}} | }} |
Latest revision as of 14:17, 18 September 2015
Short description: | p22@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_PRRX1_5end |
Coexpression cluster: | C851_Fibroblast_mesenchymal_Myoblast_normal_Olfactory_skeletal_Osteoblast |
Association with transcript: | -130bp_to_ENST00000239461_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.56e-22 | 76 |
preadipocyte | 2.70e-14 | 12 |
multi fate stem cell | 2.40e-10 | 427 |
somatic stem cell | 6.44e-10 | 433 |
stem cell | 2.28e-09 | 441 |
skin fibroblast | 5.03e-09 | 23 |
connective tissue cell | 1.13e-07 | 361 |
mesenchymal cell | 8.07e-07 | 354 |
visceral preadipocyte | 9.18e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
integument | 1.22e-08 | 46 |
integumental system | 1.22e-08 | 46 |
connective tissue | 1.64e-07 | 371 |