FFCP PHASE1:Hg19::chr1:158979851..158979865,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:158979851..158979865,+ to FFCP PHASE1:Hg19::chr1:158979851..158979865,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3428 | |EntrezGene=3428 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |HGNC=5395 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPR3 | |UniProt=E7EPR3 | ||
|association_with_transcript=51bp_to_ENST00000430894_5end | |||
|cluster_id=chr1:158979851..158979865,+ | |||
|coexpression_cluster_id=C3886 | |||
|description=CAGE_peak_5_at_IFI16_5end | |||
|id=chr1:158979851..158979865,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.05e-22!42;CL:0000860!5.25e-21!45;CL:0000766!4.40e-20!76;CL:0002194!5.89e-18!63;CL:0000576!5.89e-18!63;CL:0000040!5.89e-18!63;CL:0000559!5.89e-18!63;CL:0002009!4.07e-17!65;CL:0000557!1.14e-16!71;CL:0000839!1.28e-16!70;CL:0000723!4.76e-09!436;CL:0000048!5.33e-09!430;CL:0000034!7.38e-08!444;CL:0002371!5.85e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.01e-20;33!CL:0002057;7.01e-20;33!CL:0000473;2.70e-17;39!CL:0000234;2.70e-17;39!CL:0000576;2.44e-15;48!CL:0000766;4.08e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.89e-25,48;CL:0000234,2.89e-25,48;CL:0000860,6.31e-25,42;CL:0002057,6.31e-25,42;CL:0000766,2.50e-23,72;CL:0002194,3.01e-21,59;CL:0000576,3.01e-21,59;CL:0000040,3.01e-21,59;CL:0000559,3.01e-21,59;CL:0000839,5.37e-20,66;CL:0002009,1.20e-19,61;CL:0000557,2.85e-19,67;CL:0000723,1.07e-09,433;CL:0000048,1.77e-09,427;CL:0000034,1.59e-08,441;CL:0000763,1.95e-07,108;CL:0000049,1.95e-07,108;CL:0002320,6.38e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;4.57e-18;42 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.87e-18!102;UBERON:0003061!2.87e-18!102;UBERON:0002204!2.37e-17!167;UBERON:0002193!4.04e-17!112;UBERON:0002371!3.20e-16!80;UBERON:0004765!4.00e-15!101;UBERON:0001434!4.00e-15!101;UBERON:0001474!3.44e-14!86;UBERON:0003081!4.75e-11!216;UBERON:0002405!1.55e-10!115;UBERON:0000926!9.24e-10!448;UBERON:0004120!9.24e-10!448;UBERON:0006603!9.24e-10!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,4.21e-20,167;UBERON:0000926,1.44e-19,315;UBERON:0004120,1.44e-19,315;UBERON:0006603,1.44e-19,315;UBERON:0002390,1.51e-19,98;UBERON:0003061,1.51e-19,98;UBERON:0004765,1.47e-18,90;UBERON:0002371,3.05e-18,76;UBERON:0001434,3.44e-18,100;UBERON:0002193,1.65e-17,108;UBERON:0001474,2.78e-16,82;UBERON:0002405,2.83e-15,93;UBERON:0003081,5.35e-14,203;UBERON:0002384,6.89e-07,371 | |||
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| ||
|short_description=p5@IFI16 | |||
}} | }} |
Latest revision as of 21:58, 17 September 2015
Short description: | p5@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IFI16_5end |
Coexpression cluster: | C3886_CD14_malignant_oral_Keratinocyte_Mallassezderived_Smooth_Small |
Association with transcript: | 51bp_to_ENST00000430894_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | E7EPR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.89e-25 | 48 |
phagocyte | 2.89e-25 | 48 |
classical monocyte | 6.31e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.31e-25 | 42 |
myeloid leukocyte | 2.50e-23 | 72 |
monopoietic cell | 3.01e-21 | 59 |
monocyte | 3.01e-21 | 59 |
monoblast | 3.01e-21 | 59 |
promonocyte | 3.01e-21 | 59 |
myeloid lineage restricted progenitor cell | 5.37e-20 | 66 |
macrophage dendritic cell progenitor | 1.20e-19 | 61 |
granulocyte monocyte progenitor cell | 2.85e-19 | 67 |
somatic stem cell | 1.07e-09 | 433 |
multi fate stem cell | 1.77e-09 | 427 |
stem cell | 1.59e-08 | 441 |
myeloid cell | 1.95e-07 | 108 |
common myeloid progenitor | 1.95e-07 | 108 |
connective tissue cell | 6.38e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 4.21e-20 | 167 |
mesoderm | 1.44e-19 | 315 |
mesoderm-derived structure | 1.44e-19 | 315 |
presumptive mesoderm | 1.44e-19 | 315 |
hematopoietic system | 1.51e-19 | 98 |
blood island | 1.51e-19 | 98 |
skeletal element | 1.47e-18 | 90 |
bone marrow | 3.05e-18 | 76 |
skeletal system | 3.44e-18 | 100 |
hemolymphoid system | 1.65e-17 | 108 |
bone element | 2.78e-16 | 82 |
immune system | 2.83e-15 | 93 |
lateral plate mesoderm | 5.35e-14 | 203 |
connective tissue | 6.89e-07 | 371 |