FFCP PHASE1:Hg19::chr1:155224987..155224998,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:155224987..155224998,- to FFCP PHASE1:Hg19::chr1:155224987..155224998,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10712 | |EntrezGene=10712 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1233 | |HGNC=1233 | ||
|TSSclassifier=strong | |||
|UniProt=Q96AD8 | |UniProt=Q96AD8 | ||
|association_with_transcript=-5bp_to_ENST00000487649_5end | |||
|cluster_id=chr1:155224987..155224998,- | |||
|description=CAGE_peak_8_at_FAM189B_5end | |||
|id=chr1:155224987..155224998,- | |||
|ontology_enrichment_celltype=CL:0000055!5.76e-14!180;CL:0002321!1.13e-08!248;CL:0000243!1.87e-08!15;CL:0000125!1.87e-08!15;CL:0000030!1.87e-08!15;CL:0000339!1.87e-08!15;CL:0000220!2.22e-08!246;CL:0000183!3.99e-07!59;CL:0000095!4.94e-07!17;CL:0000123!4.94e-07!17;CL:0002319!7.11e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000669;7.13e-24;4!CL:1000507;1.99e-21;10!CL:1000494;1.99e-21;10!CL:1000449;4.18e-14;15!CL:0000650;5.25e-13;2!CL:1000500;5.25e-13;2!CL:1000618;5.25e-13;2!CL:1001318;5.25e-13;2!CL:0002173;5.25e-13;2!CL:0002575;1.21e-12;2!CL:1000497;2.22e-12;17!CL:0002518;2.22e-12;17!CL:0002586;4.97e-09;3!CL:0002605;5.83e-09;3!CL:0002681;3.30e-08;12!CL:0002584;3.30e-08;12!CL:0000149;5.67e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,1.65e-23,4;CL:1000507,2.23e-21,10;CL:1000494,2.23e-21,10;CL:1000449,4.50e-14,15;CL:0000650,7.13e-13,2;CL:1000500,7.13e-13,2;CL:1000618,7.13e-13,2;CL:1001318,7.13e-13,2;CL:0002173,7.13e-13,2;CL:0002575,2.07e-12,2;CL:1000497,2.37e-12,17;CL:0002518,2.37e-12,17;CL:0002586,4.08e-09,3;CL:0002605,9.04e-09,3;CL:0002681,3.51e-08,12;CL:0002584,3.51e-08,12;CL:0000149,4.90e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!3.87e-12!347;UBERON:0005256!5.64e-12!143;UBERON:0002100!2.29e-11!216;UBERON:0000475!3.09e-11!365;UBERON:0003104!3.90e-10!238;UBERON:0009142!3.90e-10!238;UBERON:0000119!1.14e-08!312;UBERON:0000922!2.02e-08!612;UBERON:0000483!2.41e-08!309;UBERON:0000914!6.32e-08!83;UBERON:0002329!6.32e-08!83;UBERON:0003077!6.32e-08!83;UBERON:0003059!6.32e-08!83;UBERON:0007282!6.32e-08!83;UBERON:0009618!6.32e-08!83;UBERON:0007285!6.32e-08!83;UBERON:0000468!1.41e-07!659;UBERON:0000923!2.30e-07!604;UBERON:0005291!2.30e-07!604;UBERON:0006598!2.30e-07!604;UBERON:0002532!2.30e-07!604;UBERON:0002050!2.89e-07!605;UBERON:0005423!2.89e-07!605;UBERON:0005177!9.74e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.99e-21;10!UBERON:0009773;1.99e-21;10!UBERON:0001231;1.99e-21;10!UBERON:0004810;1.99e-21;10!UBERON:0006555;4.18e-14;15!UBERON:0004819;4.18e-14;15!UBERON:0001285;4.18e-14;15!UBERON:0007684;4.18e-14;15!UBERON:0003891;5.64e-14;4!UBERON:0003567;5.25e-13;2!UBERON:0003838;5.25e-13;2!UBERON:0003586;5.25e-13;2!UBERON:0005169;5.25e-13;2!UBERON:0002321;5.25e-13;2!UBERON:0005215;5.25e-13;2!UBERON:0002303;5.25e-13;2!UBERON:0002319;5.25e-13;2!UBERON:0002113;1.71e-11;24!UBERON:0011143;1.71e-11;24!UBERON:0000489;2.34e-09;29!UBERON:0001781;4.97e-09;3!UBERON:0001782;4.97e-09;3!UBERON:0006554;5.15e-09;30!UBERON:0001008;5.15e-09;30!UBERON:0001225;3.30e-08;12!UBERON:0008987;3.30e-08;12!UBERON:0001474;4.77e-08;18!UBERON:0004765;1.18e-07;26!UBERON:0000019;1.35e-07;19!UBERON:0000047;1.35e-07;19!UBERON:0004088;1.35e-07;19!UBERON:0010230;1.35e-07;19!UBERON:0000970;3.34e-07;20!UBERON:0001434;5.30e-07;36!UBERON:0002104;7.56e-07;21!UBERON:0001456;7.56e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,2.23e-21,10;UBERON:0004211,4.50e-14,15;UBERON:0009773,4.50e-14,15;UBERON:0001231,4.50e-14,15;UBERON:0001285,4.50e-14,15;UBERON:0007684,4.50e-14,15;UBERON:0004208,4.50e-14,15;UBERON:0003891,9.85e-14,4;UBERON:0006555,3.70e-13,16;UBERON:0004819,3.70e-13,16;UBERON:0003567,7.13e-13,2;UBERON:0003838,7.13e-13,2;UBERON:0003586,7.13e-13,2;UBERON:0005169,7.13e-13,2;UBERON:0002321,7.13e-13,2;UBERON:0005215,7.13e-13,2;UBERON:0002303,7.13e-13,2;UBERON:0002319,7.13e-13,2;UBERON:0002113,1.38e-10,26;UBERON:0003918,1.38e-10,26;UBERON:0011143,1.38e-10,26;UBERON:0005095,1.38e-10,26;UBERON:0007687,1.38e-10,26;UBERON:0001782,4.08e-09,3;UBERON:0005424,4.08e-09,3;UBERON:0000489,9.82e-09,31;UBERON:0001225,3.51e-08,12;UBERON:0008987,3.51e-08,12;UBERON:0005172,1.31e-07,54;UBERON:0005173,1.31e-07,54;UBERON:0000019,3.32e-07,20;UBERON:0000047,3.32e-07,20;UBERON:0010312,3.32e-07,20;UBERON:0004088,3.32e-07,20;UBERON:0010230,3.32e-07,20;UBERON:0003072,3.32e-07,20;UBERON:0004128,3.32e-07,20;UBERON:0003071,3.32e-07,20;UBERON:0001781,4.90e-07,4;UBERON:0000970,7.52e-07,21;UBERON:0002104,7.52e-07,21 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,7.59899634504932,0,0.522371256399677,0,0.697801167972428,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0.861847406537515,0.816002764977012,0.626909442956176,0.85870796139317,2.18999080116615,1.00434111675842,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.567208902984407,0.443458794925128,0.87834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0.402829317109147,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0,0.234321431833797,0.936480230490962,0,0.149448680551801,0.822041490506354,0.161872944368132,0.421352420106746,0,0.859840221182376,0.929932030581889,0,0,0,0,0.168336113954066,0.625592599359821,1.38532057742091,0.877955241761676,0,0.150238058906597,0.340296549480063,0,0,0,0,0.206105058476878,0,0.18611685633159,0,0,0,0.276149695926898,0,0.355009592516614,0,0,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0.591534000199219,0.168584690078102,0.241011029883482,0.661763836394364,0.435758888184812,0.474541238222193,0.539325232640658,0,0.38474715694639,0,0,0.8231480226628,1.47008711385542,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.185176890317059,0.325808305310325,1.03993478527958,1.44331342025273,0.811512834825538,0.469634776943287,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0,0.224262168690721,0,0.36669142910475,0,0,0,0,1.04007436911366,1.02882949704857,1.41849132023278,0.532844358032199,1.71573592389777,0,0,0,0.710783897485092,0,0.301439377059586,0,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0.254094624222463,0,0.773288812777695,0.670065061337395,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0,0.117141414992713,0,0,0,0,0,0.347534457872331,1.17480694477644,1.02943027143257,0,0,0,0.303127571446259,0,0.604780586659361,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.34444334449382,0,0.131124414959424,3.15839729035188,0.616122696835318,3.13739907670742,2.92278449306521,0.527758144464379,0,0.340187410553031,0.431831832204279,0,1.08378575017541,2.00675909541941,1.27438136522519,0,0,0,0,3.59030175162945,1.31205858279882,0,0,1.19040304263846,0.660075999364704,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.413509717453592,0.107420244868274,0.725083469571143,0.0852266274161009,0.267096106940212,0.330569830721956,0,0,0,0,0.31481234683064,0,0,0,0.869932992075073,0.18532421910392,0,0,0.316379424718726,0.762520775695299,0.511795582622668,0,0.318203247925937,0,0,0.274537029736055,0.471249609382746,0.808729926293264,0,0,0,0.487426979262569,0,0.272999822815972,0.424216295861138,0,0.551365343546124,0,0.438450885253763,2.31510213706675,0.655894752046633,0,0.30982349809975,0,0.717056761020258,0.491245205065606,0.35667105148125,0,0,0,0.379473173765715,1.04980416073495,0.288666338176536,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,1.70918513803957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0.278406173895242,1.23087398947712,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0.20453736500431,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0.254253650292766,0,0,0,0.347249989866585,0,0,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0.225595660617181,0,0.503464760927528,0,0,0,0,0.565412285735763,0.216388639742091,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0.61214552326098,0.063186579628488,0.150323419414493,0.311064574191741,0,0,0,0,0.284609546029793,0.138674673013139,0,0.293977192243133,0.0870592065804026,0,0,0,0.219267951258557,0.164230914106418,0,0.176512253383001,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.160317640503067,0.213452994739353,0.19980960958213,0,0.114536596165916,0.171594997861965,0,0.124252535565433,0.235694034616795,1.08723364858891,1.04602846312333,0.815985741090574,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.630265458457789,0.906574442192831,0.539228350833479,0,0,0,0,0.321506296930038,0,0,0,0,0,0,0.0788057072991982,0,0.528001682597033,0.179287339332845,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0.226624183040251,0,0,0.387848869084652,0.26446520348538,0,0,0.213574825135389,0.157204305099666,0.41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| ||
|short_description=p8@FAM189B | |||
}} | }} |
Latest revision as of 12:03, 17 September 2015
Short description: | p8@FAM189B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FAM189B_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000487649_5end |
EntrezGene: | FAM189B |
HGNC: | 1233 |
UniProt: | Q96AD8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 1.65e-23 | 4 |
kidney tubule cell | 2.23e-21 | 10 |
nephron tubule epithelial cell | 2.23e-21 | 10 |
epithelial cell of nephron | 4.50e-14 | 15 |
mesangial cell | 7.13e-13 | 2 |
kidney interstitial cell | 7.13e-13 | 2 |
juxtaglomerular complex cell | 7.13e-13 | 2 |
renal interstitial pericyte | 7.13e-13 | 2 |
extraglomerular mesangial cell | 7.13e-13 | 2 |
central nervous system pericyte | 2.07e-12 | 2 |
kidney cell | 2.37e-12 | 17 |
kidney epithelial cell | 2.37e-12 | 17 |
retinal pigment epithelial cell | 4.08e-09 | 3 |
astrocyte of the cerebral cortex | 9.04e-09 | 3 |
kidney cortical cell | 3.51e-08 | 12 |
renal cortical epithelial cell | 3.51e-08 | 12 |
visual pigment cell | 4.90e-07 | 4 |