FFCP PHASE1:Hg19::chr1:1551541..1551559,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:1551541..1551559,- to FFCP PHASE1:Hg19::chr1:1551541..1551559,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=142678 | |EntrezGene=142678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30577 | |HGNC=30577 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-366bp_to_BC035078_5end | |||
|cluster_id=chr1:1551541..1551559,- | |||
|description=CAGE_peak_5_at_MIB2_5end | |||
|id=chr1:1551541..1551559,- | |||
|ontology_enrichment_celltype=CL:0000766!4.81e-19!76;CL:0002057!1.73e-18!42;CL:0000860!7.72e-17!45;CL:0000557!5.71e-15!71;CL:0002009!9.65e-15!65;CL:0000839!6.90e-14!70;CL:0002194!1.23e-13!63;CL:0000576!1.23e-13!63;CL:0000040!1.23e-13!63;CL:0000559!1.23e-13!63;CL:0000048!5.41e-10!430;CL:0000738!6.70e-10!140;CL:0000723!1.48e-09!436;CL:0000034!9.34e-09!444;CL:0000134!2.13e-08!358;CL:0002320!2.15e-08!365;CL:0000763!2.91e-08!112;CL:0000049!2.91e-08!112;CL:0002031!4.89e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-15;33!CL:0002057;1.05e-15;33!CL:0000766;7.84e-12;69!CL:0000473;8.57e-12;39!CL:0000234;8.57e-12;39!CL:0000576;1.02e-11;48!CL:0000094;2.41e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.96e-26,72;CL:0000860,2.98e-23,42;CL:0002057,2.98e-23,42;CL:0000473,1.04e-21,48;CL:0000234,1.04e-21,48;CL:0000557,5.83e-21,67;CL:0002009,6.68e-20,61;CL:0000839,7.39e-19,66;CL:0002194,2.12e-18,59;CL:0000576,2.12e-18,59;CL:0000040,2.12e-18,59;CL:0000559,2.12e-18,59;CL:0000738,3.49e-17,136;CL:0000763,9.91e-13,108;CL:0000049,9.91e-13,108;CL:0002031,5.66e-12,120;CL:0000134,1.03e-11,354;CL:0002320,2.17e-11,361;CL:0000048,3.08e-11,427;CL:0002087,4.67e-11,115;CL:0000723,6.61e-11,433;CL:0000034,1.94e-10,441;CL:0000037,9.76e-10,168;CL:0000219,7.87e-09,386;CL:0002032,1.13e-08,161;CL:0000837,1.13e-08,161;CL:0000988,2.33e-08,177;CL:0000094,2.57e-08,8;CL:0002393,3.46e-07,9;CL:0002397,3.46e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.20e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.72e-13!80;UBERON:0002204!1.10e-12!167;UBERON:0001474!3.29e-12!86;UBERON:0003081!2.87e-11!216;UBERON:0002390!4.39e-10!102;UBERON:0003061!4.39e-10!102;UBERON:0004765!2.35e-09!101;UBERON:0001434!2.35e-09!101;UBERON:0002405!2.83e-09!115;UBERON:0002193!3.80e-09!112;UBERON:0002384!7.29e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.64e-17,76;UBERON:0001474,9.19e-16,82;UBERON:0003081,1.62e-15,203;UBERON:0002390,8.96e-14,98;UBERON:0003061,8.96e-14,98;UBERON:0004765,2.51e-13,90;UBERON:0002405,7.78e-13,93;UBERON:0002193,5.05e-12,108;UBERON:0000926,2.85e-11,315;UBERON:0004120,2.85e-11,315;UBERON:0006603,2.85e-11,315;UBERON:0001434,2.96e-11,100;UBERON:0002204,3.43e-11,167;UBERON:0002384,1.06e-10,371 | |||
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|short_description=p5@MIB2 | |||
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Latest revision as of 11:37, 17 September 2015
Short description: | p5@MIB2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MIB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -366bp_to_BC035078_5end |
EntrezGene: | MIB2 |
HGNC: | 30577 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.64e-17 | 76 |
bone element | 9.19e-16 | 82 |
lateral plate mesoderm | 1.62e-15 | 203 |
hematopoietic system | 8.96e-14 | 98 |
blood island | 8.96e-14 | 98 |
skeletal element | 2.51e-13 | 90 |
immune system | 7.78e-13 | 93 |
hemolymphoid system | 5.05e-12 | 108 |
mesoderm | 2.85e-11 | 315 |
mesoderm-derived structure | 2.85e-11 | 315 |
presumptive mesoderm | 2.85e-11 | 315 |
skeletal system | 2.96e-11 | 100 |
musculoskeletal system | 3.43e-11 | 167 |
connective tissue | 1.06e-10 | 371 |