FFCP PHASE1:Hg19::chr1:145715572..145715599,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11126 | |EntrezGene=11126 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17013 | |HGNC=17013 | ||
|TSSclassifier=strong | |||
|UniProt=O95971,Q6FH89 | |UniProt=O95971,Q6FH89 | ||
|association_with_transcript=-7bp_to_ENST00000369288,NM_007053,uc001eol.1,uc001eom.1_5end | |||
|cluster_id=chr1:145715572..145715599,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_1_at_CD160_5end | |||
|id=chr1:145715572..145715599,- | |||
|ontology_enrichment_celltype=CL:0000791!4.05e-21!18;CL:0000789!4.05e-21!18;CL:0002420!4.05e-21!18;CL:0002419!4.05e-21!18;CL:0000790!4.05e-21!18;CL:0000625!4.34e-21!11;CL:0000084!1.02e-17!25;CL:0000827!1.02e-17!25;CL:0000838!6.12e-14!52;CL:0000542!1.52e-13!53;CL:0000051!1.52e-13!53;CL:0000738!5.36e-09!140;CL:0002087!3.43e-08!119;CL:0000767!2.98e-07!3;CL:0000623!4.00e-07!3;CL:0000825!4.00e-07!3;CL:0000842!5.77e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000625;2.31e-41;11!CL:0000791;2.50e-24;18!CL:0000789;2.50e-24;18!CL:0002419;2.50e-24;18!CL:0000084;7.77e-17;25!CL:0000767;3.89e-13;3!CL:0000623;7.17e-13;3!CL:0000226;1.62e-12;3!CL:0000842;1.62e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,2.45e-41,11;CL:0000791,2.59e-24,18;CL:0000789,2.59e-24,18;CL:0002420,2.59e-24,18;CL:0002419,2.59e-24,18;CL:0000790,2.59e-24,18;CL:0000084,7.96e-17,25;CL:0000827,7.96e-17,25;CL:0000767,3.97e-13,3;CL:0000623,7.17e-13,3;CL:0000825,7.17e-13,3;CL:0000226,1.50e-12,3;CL:0000842,1.50e-12,3;CL:0000838,1.11e-11,52;CL:0000542,2.12e-11,53;CL:0000051,2.12e-11,53;CL:0000738,1.93e-10,136;CL:0002087,1.53e-08,115;CL:0000037,2.04e-07,168;CL:0000988,8.98e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;2.50e-24;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.78e-26!115;UBERON:0000178!4.65e-20!15;UBERON:0000179!4.65e-20!15;UBERON:0000463!4.65e-20!15;UBERON:0004177!1.00e-08!7;UBERON:0003408!1.29e-07!10;UBERON:0002370!4.61e-07!4;UBERON:0005058!4.61e-07!4;UBERON:0009113!4.61e-07!4;UBERON:0003295!4.61e-07!4;UBERON:0005562!4.61e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.66e-35;15!UBERON:0000179;3.66e-35;15!UBERON:0000463;3.66e-35;15!UBERON:0002390;1.21e-19;32!UBERON:0002193;1.66e-10;42!UBERON:0001829;7.30e-08;2!UBERON:0002108;3.28e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.40e-35,15;UBERON:0000179,3.40e-35,15;UBERON:0000463,3.40e-35,15;UBERON:0001829,7.84e-08,2;UBERON:0002108,3.24e-07,4;UBERON:0002390,3.65e-07,98;UBERON:0003061,3.65e-07,98 | |||
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| ||
|short_description=p1@CD160 | |||
}} | }} |
Latest revision as of 18:52, 16 September 2015
Short description: | p1@CD160 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CD160_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -7bp_to_ENST00000369288, NM_007053, uc001eol.1, uc001eom.1_5end |
EntrezGene: | CD160 |
HGNC: | 17013 |
UniProt: | O95971Q6FH89 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 2.45e-41 | 11 |
mature alpha-beta T cell | 2.59e-24 | 18 |
alpha-beta T cell | 2.59e-24 | 18 |
immature T cell | 2.59e-24 | 18 |
mature T cell | 2.59e-24 | 18 |
immature alpha-beta T cell | 2.59e-24 | 18 |
T cell | 7.96e-17 | 25 |
pro-T cell | 7.96e-17 | 25 |
basophil | 3.97e-13 | 3 |
natural killer cell | 7.17e-13 | 3 |
pro-NK cell | 7.17e-13 | 3 |
single nucleate cell | 1.50e-12 | 3 |
mononuclear cell | 1.50e-12 | 3 |
lymphoid lineage restricted progenitor cell | 1.11e-11 | 52 |
lymphocyte | 2.12e-11 | 53 |
common lymphoid progenitor | 2.12e-11 | 53 |
leukocyte | 1.93e-10 | 136 |
nongranular leukocyte | 1.53e-08 | 115 |
hematopoietic stem cell | 2.04e-07 | 168 |
hematopoietic cell | 8.98e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.40e-35 | 15 |
haemolymphatic fluid | 3.40e-35 | 15 |
organism substance | 3.40e-35 | 15 |
major salivary gland | 7.84e-08 | 2 |
small intestine | 3.24e-07 | 4 |
hematopoietic system | 3.65e-07 | 98 |
blood island | 3.65e-07 | 98 |