FFCP PHASE1:Hg19::chr1:12227035..12227058,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:12227035..12227058,+ to FFCP PHASE1:Hg19::chr1:12227035..12227058,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7133 | |EntrezGene=7133 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11917 | |HGNC=11917 | ||
|TSSclassifier=strong | |||
|UniProt=P20333,E7EU58,B5A977 | |UniProt=P20333,E7EU58,B5A977 | ||
|association_with_transcript=-1bp_to_ENST00000376259,ENST00000400863,ENST00000492361,ENST00000536782,NM_001066,uc001att.2,uc001atu.2,uc009vnk.2_5end | |||
|cluster_id=chr1:12227035..12227058,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_TNFRSF1B_5end | |||
|id=chr1:12227035..12227058,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.50e-40!172;CL:0000566!4.50e-40!172;CL:0000738!3.60e-39!140;CL:0002032!1.17e-38!165;CL:0000837!1.17e-38!165;CL:0000988!2.11e-38!182;CL:0002087!6.53e-34!119;CL:0002031!1.78e-31!124;CL:0000763!4.48e-30!112;CL:0000049!4.48e-30!112;CL:0000766!4.41e-28!76;CL:0002057!1.76e-27!42;CL:0002009!4.67e-27!65;CL:0002194!5.11e-26!63;CL:0000576!5.11e-26!63;CL:0000040!5.11e-26!63;CL:0000559!5.11e-26!63;CL:0000557!1.39e-24!71;CL:0000839!4.10e-23!70;CL:0000860!9.79e-23!45;CL:0000134!9.54e-14!358;CL:0002320!1.40e-13!365;CL:0000048!1.14e-11!430;CL:0000723!3.03e-10!436;CL:0000034!6.60e-10!444;CL:0000838!2.84e-08!52;CL:0000542!3.94e-08!53;CL:0000051!3.94e-08!53;CL:0000219!3.98e-08!390;CL:0000791!1.38e-07!18;CL:0000789!1.38e-07!18;CL:0002420!1.38e-07!18;CL:0002419!1.38e-07!18;CL:0000790!1.38e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-20;33!CL:0002057;1.60e-20;33!CL:0000473;8.33e-20;39!CL:0000234;8.33e-20;39!CL:0000576;4.46e-18;48!CL:0000766;4.30e-14;69!CL:0002087;1.74e-11;104!CL:0000738;1.36e-09;136!CL:0000763;1.57e-09;100!CL:0000988;3.08e-08;177!CL:0000791;1.26e-07;18!CL:0000789;1.26e-07;18!CL:0002419;1.26e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.76e-44,168;CL:0000738,4.21e-43,136;CL:0002032,2.78e-42,161;CL:0000837,2.78e-42,161;CL:0000988,6.53e-42,177;CL:0002087,9.29e-38,115;CL:0002031,4.84e-35,120;CL:0000763,1.18e-33,108;CL:0000049,1.18e-33,108;CL:0000766,2.85e-32,72;CL:0002009,1.32e-31,61;CL:0000473,8.78e-31,48;CL:0000234,8.78e-31,48;CL:0002194,1.54e-30,59;CL:0000576,1.54e-30,59;CL:0000040,1.54e-30,59;CL:0000559,1.54e-30,59;CL:0000557,1.42e-28,67;CL:0000860,1.13e-27,42;CL:0002057,1.13e-27,42;CL:0000839,5.69e-27,66;CL:0000134,9.57e-15,354;CL:0002320,1.73e-14,361;CL:0000048,1.22e-12,427;CL:0000723,3.41e-11,433;CL:0000034,7.81e-11,441;CL:0000219,6.73e-09,386;CL:0000838,1.66e-08,52;CL:0000542,2.33e-08,53;CL:0000051,2.33e-08,53;CL:0000791,1.24e-07,18;CL:0000789,1.24e-07,18;CL:0002420,1.24e-07,18;CL:0002419,1.24e-07,18;CL:0000790,1.24e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;4.44e-20;42!CL:0000049;6.51e-10;108!CL:0000790;1.26e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.19e-34!112;UBERON:0002390!8.23e-32!102;UBERON:0003061!8.23e-32!102;UBERON:0002405!2.90e-25!115;UBERON:0002371!1.58e-23!80;UBERON:0001474!5.43e-19!86;UBERON:0003081!3.93e-16!216;UBERON:0007023!7.45e-16!115;UBERON:0004765!2.91e-13!101;UBERON:0001434!2.91e-13!101;UBERON:0002384!5.08e-13!375;UBERON:0002204!9.33e-10!167;UBERON:0000178!7.18e-07!15;UBERON:0000179!7.18e-07!15;UBERON:0000463!7.18e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002193;5.80e-07;42!UBERON:0000178;6.50e-07;15!UBERON:0000179;6.50e-07;15!UBERON:0000463;6.50e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.10e-38,108;UBERON:0002390,1.44e-35,98;UBERON:0003061,1.44e-35,98;UBERON:0002405,4.05e-32,93;UBERON:0002371,4.26e-27,76;UBERON:0001474,8.32e-22,82;UBERON:0003081,3.80e-21,203;UBERON:0004765,5.29e-17,90;UBERON:0007023,6.30e-16,114;UBERON:0001434,9.49e-15,100;UBERON:0002384,6.63e-14,371;UBERON:0000926,4.32e-11,315;UBERON:0004120,4.32e-11,315;UBERON:0006603,4.32e-11,315;UBERON:0002204,8.68e-11,167;UBERON:0000178,6.55e-07,15;UBERON:0000179,6.55e-07,15;UBERON:0000463,6.55e-07,15 | |||
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| ||
|short_description=p1@TNFRSF1B | |||
}} | }} |
Latest revision as of 13:42, 16 September 2015
Short description: | p1@TNFRSF1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TNFRSF1B_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -1bp_to_ENST00000376259, ENST00000400863, ENST00000492361, ENST00000536782, NM_001066, uc001att.2, uc001atu.2, uc009vnk.2_5end |
EntrezGene: | TNFRSF1B |
HGNC: | 11917 |
UniProt: | P20333E7EU58B5A977 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.10e-38 | 108 |
hematopoietic system | 1.44e-35 | 98 |
blood island | 1.44e-35 | 98 |
immune system | 4.05e-32 | 93 |
bone marrow | 4.26e-27 | 76 |
bone element | 8.32e-22 | 82 |
lateral plate mesoderm | 3.80e-21 | 203 |
skeletal element | 5.29e-17 | 90 |
adult organism | 6.30e-16 | 114 |
skeletal system | 9.49e-15 | 100 |
connective tissue | 6.63e-14 | 371 |
mesoderm | 4.32e-11 | 315 |
mesoderm-derived structure | 4.32e-11 | 315 |
presumptive mesoderm | 4.32e-11 | 315 |
musculoskeletal system | 8.68e-11 | 167 |
blood | 6.55e-07 | 15 |
haemolymphatic fluid | 6.55e-07 | 15 |
organism substance | 6.55e-07 | 15 |