FFCP PHASE1:Hg19::chr1:120612261..120612288,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:120612261..120612288,- to FFCP PHASE1:Hg19::chr1:120612261..120612288,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4853 | |EntrezGene=4853 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7882 | |HGNC=7882 | ||
|TSSclassifier=strong | |||
|UniProt=Q6IQ50 | |UniProt=Q6IQ50 | ||
|association_with_transcript=0bp_to_uc001eik.2,uc001eil.2,uc001eim.3_5end | |||
|cluster_id=chr1:120612261..120612288,- | |||
|description=CAGE_peak_1_at_NOTCH2_5end | |||
|id=chr1:120612261..120612288,- | |||
|ontology_enrichment_celltype=CL:0000766!2.59e-08!76;CL:0000557!3.28e-08!71;CL:0002009!2.34e-07!65;CL:0000048!2.67e-07!430;CL:0002320!3.96e-07!365;CL:0000034!7.93e-07!444;CL:0002194!8.01e-07!63;CL:0000576!8.01e-07!63;CL:0000040!8.01e-07!63;CL:0000559!8.01e-07!63 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.93e-10,67;CL:0000766,8.40e-10,72;CL:0002009,6.24e-09,61;CL:0002194,2.54e-08,59;CL:0000576,2.54e-08,59;CL:0000040,2.54e-08,59;CL:0000559,2.54e-08,59;CL:0000048,6.15e-08,427;CL:0000839,6.46e-08,66;CL:0002320,1.02e-07,361;CL:0000034,2.07e-07,441;CL:0000723,3.19e-07,433;CL:0000763,3.31e-07,108;CL:0000049,3.31e-07,108;CL:0000134,4.66e-07,354;CL:0000860,6.66e-07,42;CL:0002057,6.66e-07,42;CL:0000473,6.97e-07,48;CL:0000234,6.97e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.09e-09!86;UBERON:0002204!4.43e-09!167;UBERON:0002371!8.90e-09!80;UBERON:0004765!1.21e-08!101;UBERON:0001434!1.21e-08!101;UBERON:0002390!4.65e-08!102;UBERON:0003061!4.65e-08!102;UBERON:0002384!1.38e-07!375;UBERON:0000926!7.00e-07!448;UBERON:0004120!7.00e-07!448;UBERON:0006603!7.00e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,8.12e-11,82;UBERON:0002371,2.79e-10,76;UBERON:0004765,7.07e-10,90;UBERON:0001434,1.11e-09,100;UBERON:0002204,1.62e-09,167;UBERON:0002390,4.79e-09,98;UBERON:0003061,4.79e-09,98;UBERON:0002384,4.90e-08,371;UBERON:0002193,3.01e-07,108 | |||
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| ||
|short_description=p1@NOTCH2 | |||
}} | }} |
Latest revision as of 12:40, 16 September 2015
Short description: | p1@NOTCH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NOTCH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc001eik.2, uc001eil.2, uc001eim.3_5end |
EntrezGene: | NOTCH2 |
HGNC: | 7882 |
UniProt: | Q6IQ50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 6.93e-10 | 67 |
myeloid leukocyte | 8.40e-10 | 72 |
macrophage dendritic cell progenitor | 6.24e-09 | 61 |
monopoietic cell | 2.54e-08 | 59 |
monocyte | 2.54e-08 | 59 |
monoblast | 2.54e-08 | 59 |
promonocyte | 2.54e-08 | 59 |
multi fate stem cell | 6.15e-08 | 427 |
myeloid lineage restricted progenitor cell | 6.46e-08 | 66 |
connective tissue cell | 1.02e-07 | 361 |
stem cell | 2.07e-07 | 441 |
somatic stem cell | 3.19e-07 | 433 |
myeloid cell | 3.31e-07 | 108 |
common myeloid progenitor | 3.31e-07 | 108 |
mesenchymal cell | 4.66e-07 | 354 |
classical monocyte | 6.66e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.66e-07 | 42 |
defensive cell | 6.97e-07 | 48 |
phagocyte | 6.97e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone element | 8.12e-11 | 82 |
bone marrow | 2.79e-10 | 76 |
skeletal element | 7.07e-10 | 90 |
skeletal system | 1.11e-09 | 100 |
musculoskeletal system | 1.62e-09 | 167 |
hematopoietic system | 4.79e-09 | 98 |
blood island | 4.79e-09 | 98 |
connective tissue | 4.90e-08 | 371 |
hemolymphoid system | 3.01e-07 | 108 |