FFCP PHASE1:Hg19::chr1:111742942..111742955,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:111742942..111742955,+ to FFCP PHASE1:Hg19::chr1:111742942..111742955,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1117 | |EntrezGene=1117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1933 | |HGNC=1933 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-437bp_to_ENST00000445067_5end | |||
|cluster_id=chr1:111742942..111742955,+ | |||
|coexpression_cluster_id=C1017 | |||
|description=CAGE_peak_5_at_CHI3L2_5end | |||
|id=chr1:111742942..111742955,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.15e-53!140;CL:0002031!7.02e-53!124;CL:0000557!4.18e-49!71;CL:0002087!9.34e-49!119;CL:0002032!9.83e-49!165;CL:0000837!9.83e-49!165;CL:0000037!1.88e-48!172;CL:0000566!1.88e-48!172;CL:0000766!5.16e-48!76;CL:0000839!1.76e-46!70;CL:0002009!8.82e-45!65;CL:0000988!1.27e-43!182;CL:0002194!3.31e-43!63;CL:0000576!3.31e-43!63;CL:0000040!3.31e-43!63;CL:0000559!3.31e-43!63;CL:0002057!2.14e-41!42;CL:0000763!3.90e-40!112;CL:0000049!3.90e-40!112;CL:0000860!6.41e-39!45;CL:0000838!9.68e-09!52;CL:0002393!1.03e-08!9;CL:0002397!1.03e-08!9;CL:0000134!1.82e-08!358;CL:0000542!2.05e-08!53;CL:0000051!2.05e-08!53;CL:0002320!9.09e-08!365;CL:0000791!2.52e-07!18;CL:0000789!2.52e-07!18;CL:0002420!2.52e-07!18;CL:0002419!2.52e-07!18;CL:0000790!2.52e-07!18;CL:0000625!2.69e-07!11;CL:0002274!9.15e-07!5;CL:0000457!9.15e-07!5;CL:0002191!9.15e-07!5;CL:0000097!9.15e-07!5;CL:0000831!9.15e-07!5;CL:0002028!9.15e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.73e-55;33!CL:0002057;7.73e-55;33!CL:0000473;1.69e-54;39!CL:0000234;1.69e-54;39!CL:0000576;1.67e-43;48!CL:0000766;2.33e-38;69!CL:0000738;9.19e-17;136!CL:0000763;8.69e-16;100!CL:0002087;1.01e-15;104!CL:0000235;3.78e-13;6!CL:0002393;2.33e-11;6!CL:0002397;2.33e-11;6!CL:0000097;2.99e-11;5!CL:0000988;1.98e-08;177!CL:0002619;1.36e-07;3!CL:0000219;5.15e-07;193!CL:0000767;7.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,6.98e-89,67;CL:0000766,4.58e-88,72;CL:0000839,6.18e-87,66;CL:0002009,2.54e-80,61;CL:0002194,5.66e-80,59;CL:0000576,5.66e-80,59;CL:0000040,5.66e-80,59;CL:0000559,5.66e-80,59;CL:0000473,2.74e-79,48;CL:0000234,2.74e-79,48;CL:0002031,2.44e-73,120;CL:0000738,6.08e-69,136;CL:0000860,3.09e-67,42;CL:0002057,3.09e-67,42;CL:0002087,2.23e-62,115;CL:0000763,1.83e-57,108;CL:0000049,1.83e-57,108;CL:0002032,6.24e-57,161;CL:0000837,6.24e-57,161;CL:0000037,1.03e-53,168;CL:0000988,6.00e-50,177;CL:0000134,4.25e-17,354;CL:0002320,2.23e-16,361;CL:0000219,1.71e-14,386;CL:0000235,4.28e-13,6;CL:0000097,2.74e-11,5;CL:0002028,2.74e-11,5;CL:0000048,8.25e-11,427;CL:0000723,2.15e-10,433;CL:0002393,5.36e-10,9;CL:0002397,5.36e-10,9;CL:0000034,7.35e-10,441;CL:0002619,1.34e-07,3;CL:0000767,6.60e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.49e-48;42!CL:0000049;7.46e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.74e-49!102;UBERON:0003061!2.74e-49!102;UBERON:0002193!1.16e-43!112;UBERON:0002371!9.11e-41!80;UBERON:0001474!3.30e-36!86;UBERON:0002405!6.16e-31!115;UBERON:0004765!2.73e-27!101;UBERON:0001434!2.73e-27!101;UBERON:0003081!3.77e-13!216;UBERON:0007023!3.66e-12!115;UBERON:0002204!3.01e-10!167;UBERON:0002384!3.67e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.88e-76,76;UBERON:0001474,1.15e-69,82;UBERON:0002405,1.81e-69,93;UBERON:0002390,1.60e-67,98;UBERON:0003061,1.60e-67,98;UBERON:0004765,5.11e-62,90;UBERON:0002193,8.11e-62,108;UBERON:0001434,3.60e-54,100;UBERON:0002204,6.97e-26,167;UBERON:0003081,1.32e-24,203;UBERON:0002384,2.13e-15,371;UBERON:0000926,5.18e-10,315;UBERON:0004120,5.18e-10,315;UBERON:0006603,5.18e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.6815300565883,24.4659756560838,24.2429206446132,2.75354993794233,3.83829398097213,4.33485145285013,0,0,0,0,0,0,1.66198622559563,2.20598892217156,1.30206522429511,11.6436046604761,7.77344798445551,10.8181738406358,1.89017710413434,1.13362783106643,1.21292030593908,10.6917356976615,8.22335776043652,12.6979612066992,6.04154023876516,6.40401766322752,8.51336027598907,25.1664346937732,20.0100251910986,21.6682378550947,3.38836211176688,4.36649840092553,4.71919317334678,12.2433556948361,14.4418062184242,12.1474053901818,0.659702600373432,1.19678194572979,1.70489900213078,9.86711411337186,10.2129340444405,4.35975574296902,9.54744927975624,9.38669253156363,16.9407298869991,7.26479403160043,18.4138817993782,11.7091083353127,3.38008458099107,3.61427309940574,2.93522103711726,1.23561494261145,1.35159203557356,1.12507910687956,2.28010194992999,0.59675003159727,0.365328307529268,0,0.546138611262131,0,0.853460445133014,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0,0,0,0.411202997999018,1.00311897234407,0,0.473447805734733,1.94826728407911,1.6711568532776,0.589211814949674,0.443067789167242,0.270803863765016,1.15282187753108,1.04047478047903,3.28875809207352,3.31620021343018,3.18783394308558,0.296573126324121,0.267540828089713,1.04535523804977,0.566546713487831,0.766440987203842,0,1.01207876807801,1.91139248594458,1.30216690771284,0.950452044448374,1.05402583354441,1.27986611154418,0,1.4206635122641,1.64225599384209,0.403213486449465,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,2.27183175558278,1.0447784237956,2.12732736830184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,6.40164215827233,8.89216207529103,7.13429578985896,0,0,0,0,0,0,3.4486426652716,5.28290604079356,19.4888428608326,6.48539790376326,11.9930311755061,0.063497894292169,0.763976851116555,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2435670961786,6.02708509718552,4.21667878966063,0,0,0,0,0,0,0.784596007954691,1.57624608161542,1.2937654491571,0.385029108839245,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0.886860307073351,0,0,0.764637207142375,2.84823593587081,0.952927101831156,1.64544909234478,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0.399158742865633,0,0.211673582723883,0,0,0,0.313359791546046,0,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0,0,0.586164286206121,0.556812347790485,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0,0.16480387422676,0,0,1.10513566212459,0,0,0.246169610922139,0,0,0,2.04628948090749,0.591860433821602,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0.31900115973192,0.274792780205587,1.06606955203727,1.02193298195737,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.530745387020035,0,0,0,0,0.741412462787447,0,0,0,0,0,0,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0.0967563312890851,0,0,0.484945082442097,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0.458320848023367,1.43574604915363,0,0,0.446342914883745,0.0671834724867263,0,0,0,0,0,0,2.03215996957883,0.795229689809303,0.272406812223151,0,0,0,0.449947783103001,4.6428117273477,0.0607495566580247,0,0.236417121897595,0.0524545881349981,0,0,0,0.714695326373367,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0.258565912723101,0.13223260174269,0,0,1.49502377594773,0.157204305099666,0.828478110694391,0,0,0,0,1.08803560673895,0.2506898940227,2.14441903734423,0.655745261419609,0,0,0.244052529803926,0.1251909307065,0,0.554645257684261,0.372578417648301,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0.39997479170986,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.957803154342908,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0.354809480650555,7.49020919112565,0,0.135939465953663,0.0657727735628491,0,0,0.78493092850514,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.205325613712494,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0.218559560503957,0,0.735444965261716,0,0.196308467114945,0.594092800654172,0,0,0.751871343838829,3.80301539044105,11.6931152432167,0,0,0,0,0.458729283404541,1.14671666521161,0,0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| ||
|short_description=p5@CHI3L2 | |||
}} | }} |
Latest revision as of 02:45, 16 September 2015
Short description: | p5@CHI3L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHI3L2_5end |
Coexpression cluster: | C1017_CD14_Macrophage_Monocytederived_Mast_Dendritic_B_splenic |
Association with transcript: | -437bp_to_ENST00000445067_5end |
EntrezGene: | CHI3L2 |
HGNC: | 1933 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.88e-76 | 76 |
bone element | 1.15e-69 | 82 |
immune system | 1.81e-69 | 93 |
hematopoietic system | 1.60e-67 | 98 |
blood island | 1.60e-67 | 98 |
skeletal element | 5.11e-62 | 90 |
hemolymphoid system | 8.11e-62 | 108 |
skeletal system | 3.60e-54 | 100 |
musculoskeletal system | 6.97e-26 | 167 |
lateral plate mesoderm | 1.32e-24 | 203 |
connective tissue | 2.13e-15 | 371 |
mesoderm | 5.18e-10 | 315 |
mesoderm-derived structure | 5.18e-10 | 315 |
presumptive mesoderm | 5.18e-10 | 315 |