FFCP PHASE1:Hg19::chr1:109289537..109289551,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:109289537..109289551,- to FFCP PHASE1:Hg19::chr1:109289537..109289551,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:109289537..109289551,- | |||
|description=CAGE_peak_at_chr1:109289537..109289551,- | |||
|id=chr1:109289537..109289551,- | |||
|ontology_enrichment_celltype=CL:0000860!4.24e-23!45;CL:0002057!1.79e-21!42;CL:0000037!2.39e-17!172;CL:0000566!2.39e-17!172;CL:0000763!1.24e-16!112;CL:0000049!1.24e-16!112;CL:0000557!6.25e-16!71;CL:0002032!1.18e-15!165;CL:0000837!1.18e-15!165;CL:0002009!1.28e-15!65;CL:0000988!2.00e-15!182;CL:0000766!8.76e-15!76;CL:0002194!1.67e-14!63;CL:0000576!1.67e-14!63;CL:0000040!1.67e-14!63;CL:0000559!1.67e-14!63;CL:0000839!2.13e-14!70;CL:0000738!3.34e-14!140;CL:0002031!1.40e-13!124;CL:0002087!2.41e-13!119;CL:0000063!7.77e-09!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.59e-10;33!CL:0002057;7.59e-10;33!CL:0000473;2.32e-07;39!CL:0000234;2.32e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.47e-12,108;CL:0000049,4.47e-12,108;CL:0002032,1.07e-11,161;CL:0000837,1.07e-11,161;CL:0000037,4.95e-11,168;CL:0000473,1.98e-10,48;CL:0000234,1.98e-10,48;CL:0000988,2.97e-10,177;CL:0000557,4.52e-10,67;CL:0000860,7.56e-10,42;CL:0002057,7.56e-10,42;CL:0002009,1.95e-09,61;CL:0000766,3.10e-09,72;CL:0002031,4.21e-09,120;CL:0000738,6.97e-09,136;CL:0000839,1.77e-08,66;CL:0002194,5.31e-08,59;CL:0000576,5.31e-08,59;CL:0000040,5.31e-08,59;CL:0000559,5.31e-08,59;CL:0002087,4.11e-07,115 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!5.04e-23!235;DOID:14566!1.02e-22!239;DOID:0050687!1.44e-18!143;DOID:305!2.73e-17!106;DOID:1749!7.65e-11!14;DOID:0050686!3.88e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:3111;3.61e-07;1!DOID:3603;3.61e-07;1!DOID:2355;3.61e-07;1!DOID:1749;5.97e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,1.74e-07,1;DOID:3111,3.41e-07,1;DOID:3603,3.41e-07,1;DOID:1749,4.59e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.20e-14!80;UBERON:0001474!6.10e-13!86;UBERON:0002390!3.45e-11!102;UBERON:0003061!3.45e-11!102;UBERON:0004765!2.75e-09!101;UBERON:0001434!2.75e-09!101;UBERON:0002193!9.53e-09!112;UBERON:0002405!1.43e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.61e-07;1!UBERON:0007195;3.61e-07;1!UBERON:0005056;3.61e-07;1!UBERON:0004176;3.61e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.24e-10,76;UBERON:0001474,2.69e-09,82;UBERON:0004765,2.91e-08,90;UBERON:0002405,6.40e-08,93;UBERON:0002390,2.13e-07,98;UBERON:0003061,2.13e-07,98;UBERON:0001434,3.34e-07,100;UBERON:0000997,4.89e-07,1;UBERON:0005056,4.89e-07,1;UBERON:0007195,5.84e-07,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0,0,0,0.309632246632152,0,0.30120591877825,0,0.387336002901508,0.142169232487422,0.587200878669695,0.553995408531877,2.60707781711184,0.868043482863407,0,0,0,0.436194716338694,0.377875943688809,0.727752183563449,0.464858073811369,0.411167888021826,0.929119112685311,2.3015391385772,0.256160706529101,0.47296445977717,0,0.645484683583826,0,0.376484679085209,1.09162460023138,0.224723484445085,1.53041946185451,0.320929027076094,0.639337125799041,0.659702600373432,0.398927315243264,1.27867425159808,0.290209238628584,1.13477044938228,0.622822248995575,0.75374599577023,0,0.868755378820466,1.21079900526674,1.10483290796269,1.26584954976354,0.211255286311942,0.425208599930087,0.419317291016752,0.112328631146495,0.150176892841506,0.16072558669708,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.802320587350522,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0,0,0.474541238222193,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,1.03664057770386,0.432359860250884,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,0,0,0,0,0,0,0.179060963239896,0,0.788123040807709,1.07813787429759,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.862856803274467,0.320182673410333,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0.432807638929335,0.213425530045242,0,0,0.383010740264733,0.211673582723883,0,0,0.456469358066384,0.156679895773023,0,0.50787533340481,0.1605880751037,0,1.27753871307098,2.06103206853459,0,0,0,0,0.278406173895242,1.23087398947712,0,0.66614393599564,0,1.12284324244932,0,0,1.67165076416218,0.284136146806413,0.47748896947538,0.296964680832639,0,0,0,0.333926115068718,0,0.63337622438398,0.19924798825107,0,0,0.306806047506464,0.246169610922139,0,0.449341755736634,0.179021174675609,2.04628948090749,0,0,1.11136990144637,0,0.0927680981618513,0,1.30213880542617,0.349839999984783,0,0.1137934482855,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0.32681539055697,10.3173570766166,0,0.227884111694002,0,0.179515288819544,0,0,0,0.533034776018635,2.04386596391473,0.156980256395025,0.664846727600626,0,0,0,0,0.158936578980379,0.210998064528027,0,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0.782658475728359,0.485560759068186,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0.277349346026277,0,1.17590876897253,0.522355239482415,0,0.859930162358083,0.677294319023596,0.146178634172371,0.410577285266046,0,0,0,0,0.19871461170299,0.0633107959558787,0.391102765469606,0.480952921509202,0,0.799238438328521,1.29681375438695,0,0,0.432164393964449,0,0.707082103850386,0,0,0.611989305817931,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.78741985211799,1.77813997338147,0,0,0.321506296930038,0.275078873194468,0.415440338029185,0.2249738915515,2.32140586367385,0,0,0.0788057072991982,0,0,0.179287339332845,1.72723677587501,0,0,0.25426853765475,0,0,0,0,0.328370082997356,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0.592834895693833,0.243585196761792,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0.138348634936231,0.999843263696853,1.36484205787483,0,0.235265819698172,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0.770479321629213,0,0,0.226705925512272,0,0.489473409012935,0,0,0.219284049578707,0,0.38582807654183,0.168942440653073,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0.213383459388282,0,0,0.368211900503681,0.139879507719444,0.622077260032973,0.255788742607303,0,0.471797825567689,0.109209638192014,0,0.425149840203366,0.123935764259002,0,0,0.078861745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| ||
|short_description=p@chr1:109289537..109289551,- | |||
}} | }} |
Latest revision as of 19:15, 27 July 2015
Short description: | p@chr1:109289537..109289551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:109289537..109289551, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.47e-12 | 108 |
common myeloid progenitor | 4.47e-12 | 108 |
hematopoietic oligopotent progenitor cell | 1.07e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-11 | 161 |
hematopoietic stem cell | 4.95e-11 | 168 |
defensive cell | 1.98e-10 | 48 |
phagocyte | 1.98e-10 | 48 |
hematopoietic cell | 2.97e-10 | 177 |
granulocyte monocyte progenitor cell | 4.52e-10 | 67 |
classical monocyte | 7.56e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.56e-10 | 42 |
macrophage dendritic cell progenitor | 1.95e-09 | 61 |
myeloid leukocyte | 3.10e-09 | 72 |
hematopoietic lineage restricted progenitor cell | 4.21e-09 | 120 |
leukocyte | 6.97e-09 | 136 |
myeloid lineage restricted progenitor cell | 1.77e-08 | 66 |
monopoietic cell | 5.31e-08 | 59 |
monocyte | 5.31e-08 | 59 |
monoblast | 5.31e-08 | 59 |
promonocyte | 5.31e-08 | 59 |
nongranular leukocyte | 4.11e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.24e-10 | 76 |
bone element | 2.69e-09 | 82 |
skeletal element | 2.91e-08 | 90 |
immune system | 6.40e-08 | 93 |
hematopoietic system | 2.13e-07 | 98 |
blood island | 2.13e-07 | 98 |
skeletal system | 3.34e-07 | 100 |
mammalian vulva | 4.89e-07 | 1 |
external female genitalia | 4.89e-07 | 1 |
stroma of bone marrow | 5.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
anemia | 1.74e-07 | 1 |
cystadenocarcinoma | 3.41e-07 | 1 |
mucinous cystadenocarcinoma | 3.41e-07 | 1 |
squamous cell carcinoma | 4.59e-07 | 14 |