FFCP PHASE1:Hg19::chr1:10057278..10057296,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:10057278..10057296,+ to FFCP PHASE1:Hg19::chr1:10057278..10057296,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=116362 | |EntrezGene=116362 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30316 | |HGNC=30316 | ||
|TSSclassifier=strong | |||
|UniProt=Q96R05 | |UniProt=Q96R05 | ||
|association_with_transcript=4bp_to_ENST00000294435_5end | |||
|cluster_id=chr1:10057278..10057296,+ | |||
|coexpression_cluster_id=C1639 | |||
|description=CAGE_peak_1_at_RBP7_5end | |||
|id=chr1:10057278..10057296,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.70e-24!42;CL:0000860!9.55e-21!45;CL:0000766!6.16e-16!76;CL:0002194!3.82e-15!63;CL:0000576!3.82e-15!63;CL:0000040!3.82e-15!63;CL:0000559!3.82e-15!63;CL:0002009!5.88e-14!65;CL:0000839!3.00e-12!70;CL:0000557!9.18e-12!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.24e-21;33!CL:0002057;5.24e-21;33!CL:0000576;9.48e-17;48!CL:0000473;9.42e-16;39!CL:0000234;9.42e-16;39!CL:0000766;3.77e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.02e-28,42;CL:0002057,1.02e-28,42;CL:0000473,7.49e-26,48;CL:0000234,7.49e-26,48;CL:0000766,2.30e-20,72;CL:0002194,6.42e-20,59;CL:0000576,6.42e-20,59;CL:0000040,6.42e-20,59;CL:0000559,6.42e-20,59;CL:0002009,1.21e-18,61;CL:0000839,7.79e-16,66;CL:0000557,2.49e-15,67;CL:0000763,2.44e-07,108;CL:0000049,2.44e-07,108;CL:0002393,4.27e-07,9;CL:0002397,4.27e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.49e-21;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-42!115;UBERON:0000062!1.08e-14!511;UBERON:0003075!4.80e-14!86;UBERON:0007284!4.80e-14!86;UBERON:0001049!8.12e-14!57;UBERON:0005068!8.12e-14!57;UBERON:0006241!8.12e-14!57;UBERON:0007135!8.12e-14!57;UBERON:0000922!1.37e-13!612;UBERON:0002346!6.76e-13!90;UBERON:0000468!4.94e-12!659;UBERON:0002050!5.80e-12!605;UBERON:0005423!5.80e-12!605;UBERON:0003080!1.02e-11!42;UBERON:0000923!1.10e-11!604;UBERON:0005291!1.10e-11!604;UBERON:0006598!1.10e-11!604;UBERON:0002532!1.10e-11!604;UBERON:0000467!1.57e-11!625;UBERON:0000480!2.41e-11!626;UBERON:0005743!2.70e-11!86;UBERON:0002390!4.31e-11!102;UBERON:0003061!4.31e-11!102;UBERON:0002780!4.34e-11!41;UBERON:0001890!4.34e-11!41;UBERON:0006240!4.34e-11!41;UBERON:0000073!6.33e-11!94;UBERON:0001016!6.33e-11!94;UBERON:0002616!6.72e-11!59;UBERON:0002193!1.58e-10!112;UBERON:0003056!2.91e-10!61;UBERON:0001017!3.85e-10!82;UBERON:0002020!5.60e-09!34;UBERON:0003528!5.60e-09!34;UBERON:0001893!5.60e-09!34;UBERON:0000955!7.04e-09!69;UBERON:0006238!7.04e-09!69;UBERON:0002791!1.04e-08!33;UBERON:0002371!4.00e-08!80;UBERON:0001474!5.29e-08!86;UBERON:0001869!5.64e-08!32;UBERON:0000153!2.05e-07!129;UBERON:0007811!2.05e-07!129;UBERON:0000033!5.51e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.48e-13;114!UBERON:0002780;3.85e-09;41!UBERON:0001890;3.85e-09;41!UBERON:0001893;1.42e-08;34!UBERON:0000073;2.12e-08;53!UBERON:0002616;2.12e-08;53!UBERON:0003528;2.72e-08;34!UBERON:0002020;2.72e-08;34!UBERON:0002791;4.87e-08;32!UBERON:0001869;6.72e-08;32!UBERON:0002619;2.91e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.58e-49,114;UBERON:0002390,6.05e-16,98;UBERON:0003061,6.05e-16,98;UBERON:0001049,5.51e-15,56;UBERON:0005068,5.51e-15,56;UBERON:0006241,5.51e-15,56;UBERON:0007135,5.51e-15,56;UBERON:0002193,8.97e-15,108;UBERON:0003075,4.64e-14,82;UBERON:0007284,4.64e-14,82;UBERON:0000073,8.92e-14,53;UBERON:0002616,8.92e-14,53;UBERON:0002346,1.57e-12,86;UBERON:0002780,2.41e-12,41;UBERON:0001890,2.41e-12,41;UBERON:0003080,2.41e-12,41;UBERON:0006240,2.41e-12,41;UBERON:0000922,5.17e-12,592;UBERON:0002371,1.74e-11,76;UBERON:0002405,3.87e-11,93;UBERON:0001474,4.10e-11,82;UBERON:0005423,6.19e-11,581;UBERON:0001017,1.46e-10,81;UBERON:0003056,3.74e-10,61;UBERON:0003528,8.08e-10,34;UBERON:0002020,8.08e-10,34;UBERON:0001893,8.08e-10,34;UBERON:0000955,1.04e-09,68;UBERON:0006238,1.04e-09,68;UBERON:0001016,1.86e-09,89;UBERON:0004765,3.85e-09,90;UBERON:0010371,4.26e-09,104;UBERON:0002791,6.63e-09,32;UBERON:0010314,6.66e-09,132;UBERON:0002050,9.00e-09,564;UBERON:0001869,1.23e-08,32;UBERON:0000923,1.33e-08,560;UBERON:0010316,1.33e-08,560;UBERON:0005291,1.33e-08,560;UBERON:0006598,1.33e-08,560;UBERON:0010317,1.33e-08,560;UBERON:0002532,1.33e-08,560;UBERON:0002619,3.07e-07,22;UBERON:0001434,3.36e-07,100 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0.261185628199839,1.47440361900905,1.39560233594486,4.15038607047327,7.3854753903967,0.247532705920093,0,0,0.602694528023977,0,0,0,0,0,0.572471974262113,1.23186982565596,0.627713197974014,0,0,0,14.1611139665605,10.747223146722,20.435728277722,0,0,0,0,0,0,27.6997704265939,30.8838449104018,19.3139674937108,1.34349284543955,1.29557466407592,3.09090681161024,20.0649569515799,20.4053009591957,14.7976277324568,20.4537552477002,16.8578834088949,18.2726758828111,19.2753902855841,32.0200883161376,9.69577142543199,16.8925383560943,39.3745656986134,18.9597081232078,19.3889609728883,17.73889975376,10.1125568000288,12.2433556948361,16.6883094079569,8.31138263538754,20.4507806115764,31.9141852194611,13.2129672665135,21.4754836585152,19.8584828641899,6.85104473895132,24.1198718646474,28.1600775946909,17.8094852658196,17.5565855763677,16.2042159834528,7.59509729858123,13.5203383239643,22.7486600962597,17.1920089316868,41.7862507864962,41.2986455314142,46.2889689687591,13.1105862120974,11.3382506003481,8.58521522693779,0,0,0,1.28019066769952,0,1.72425731986345,0,0,0,0.587237189370939,0.382273228125229,0,5.04457706683382,1.84368859342554,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.903450714466637,0.383959833463255,0,1.65744076430812,0,0,0,0,0,0.670700859703636,0.895037932904712,0,0,0,0,0,0.378139268656271,0.886917589850256,1.40535657109002,5.89405839739707,1.45718115317017,0.741568885568859,0,0.174129737299267,0,2.14641561874808,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,0,0.436094052142534,0,1.51956613997496,0,1.14734648299525,1.41867352879343,2.80338800071154,0,0.24666754841716,0.311211035399766,0.404132016209064,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.680593098960126,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0.323292113637624,0,0,0.169560592310488,0.386521706326594,0.818238361772504,0.860413786167011,2.07355300420312,3.04818467139416,2.20768491452085,1.65857688024593,1.00928340350251,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,8.86184860022106,0,0.491953754172454,0.343135620597051,0.548751427043128,0,0.904760751704678,0.925884451585296,0.651616610620649,0,0,1.97081688457631,0,0.866198686566443,4.1668696131895,2.66355813128438,2.37061319387782,1.71697232418975,1.96973604869918,0.234004265139238,0.594524649154913,0,2.35174979478403,0.850650583454319,0,0,0,0,0,0.621984346622316,0.288239906833923,0,0.063497894292169,0.381988425558278,0,0,1.54241239054985,0,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0.355391948742546,0,0.602878754119172,0,0.99972991182057,3.64871341923571,2.00902836572851,0,0,0,0,0,0,0,0,1.18218456121156,0,1.02674429023799,0.254094624222463,0,0.773288812777695,0.167516265334349,0,34.4543231015704,41.8826042885635,32.7388255614468,0,0,0,0.415941723061614,0.535286966391485,1.89242898040722,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,14.4737618286021,11.4328526433867,10.1391179913272,0.303127571446259,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0.802025881213139,1.28913384510255,0,0,0.262248829918848,5.86559496779635,11.4752852285578,0.784349769176855,0,4.01096189792928,6.8240030442538,0.510281115829547,1.51141141271498,3.08454505380579,1.89662506280697,2.50844886927427,8.15604073744123,14.1282921517883,3.1342465661105,0,0,26.1579127618717,7.21632220539353,4.22991913063594,6.4915837338065,1.09883357782012,0.495056999523528,0,0,1.6068392984416,0,0,0,0.275673144969061,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0.429374660225974,0.372158369359667,0,0.190630193923825,0,0,0.636406495851874,0.78494864019923,0.359744915166629,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0.6196469961995,0,0,0.491245205065606,0,0,0,0.329294892959902,0,0,0.192444225451024,0,0,6.96664125748166,0.43050537267123,0,1.33029046061003,0.459446800413919,11.6712950123399,9.1756464857085,10.8232965563091,8.5763439164804,13.5749550118444,13.6179395350471,11.3406601820004,4.75875105776562,41.8750358819695,0,18.6230564145584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,0.223676107892416,0,0,0,0,0,0,0,0,140.940868459562,0,0,0,0.23874448473769,0.890894042497916,0,4.97073823883149,4.64209074154692,0,0,3.80025734630388,22.3157746841198,9.66993704359017,0.503865495708552,0.102268682502155,0,0,0,0,0,13.2182163553491,23.948309234694,0,17.4479894297139,12.8947656444973,0,0.260427761085233,0,735.149569490881,0.682760689712998,0,0,12.4107614366927,0,11.6328746605306,2.65722415744152,1.92954301800653,6.10326945268333,0.331737779793674,10.0486190444206,5.92340572315726,0,1.11538995422883,5.61736887077719,0,0,0,2.7161842980502,0,0.0915975934018623,0,0,0,0.332423363800313,0,0,0,0,0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| ||
|short_description=p1@RBP7 | |||
}} | }} |
Latest revision as of 04:02, 25 September 2015
Short description: | p1@RBP7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RBP7_5end |
Coexpression cluster: | C1639_breast_small_left_adipose_cervix_thyroid_vagina |
Association with transcript: | 4bp_to_ENST00000294435_5end |
EntrezGene: | RBP7 |
HGNC: | 30316 |
UniProt: | Q96R05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.02e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-28 | 42 |
defensive cell | 7.49e-26 | 48 |
phagocyte | 7.49e-26 | 48 |
myeloid leukocyte | 2.30e-20 | 72 |
monopoietic cell | 6.42e-20 | 59 |
monocyte | 6.42e-20 | 59 |
monoblast | 6.42e-20 | 59 |
promonocyte | 6.42e-20 | 59 |
macrophage dendritic cell progenitor | 1.21e-18 | 61 |
myeloid lineage restricted progenitor cell | 7.79e-16 | 66 |
granulocyte monocyte progenitor cell | 2.49e-15 | 67 |
myeloid cell | 2.44e-07 | 108 |
common myeloid progenitor | 2.44e-07 | 108 |
intermediate monocyte | 4.27e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.27e-07 | 9 |