FFCP PHASE1:Hg19::chr19:7599597..7599642,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:7599597..7599642,+ to FFCP PHASE1:Hg19::chr19:7599597..7599642,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10908 | |EntrezGene=10908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16268 | |HGNC=16268 | ||
|TSSclassifier=strong | |||
|UniProt=F5H1D5,Q8IY17 | |UniProt=F5H1D5,Q8IY17 | ||
|association_with_transcript=0bp_to_ENST00000450331,ENST00000544207,NM_001166113,uc002mgr.1,uc010xjq.1_5end | |||
|cluster_id=chr19:7599597..7599642,+ | |||
|description=CAGE_peak_1_at_PNPLA6_5end | |||
|id=chr19:7599597..7599642,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.46e-19!180;CL:0000222!3.71e-16!119;CL:0002321!4.84e-15!248;CL:0000220!1.33e-14!246;CL:0000183!6.02e-11!59;CL:0000192!2.72e-09!42;CL:0000514!2.72e-09!42;CL:0000187!1.40e-08!54;CL:0000393!1.55e-08!60;CL:0000211!1.55e-08!60;CL:0000213!1.93e-08!57;CL:0000215!1.93e-08!57;CL:0000680!2.51e-08!57;CL:0000056!2.51e-08!57;CL:0000355!2.51e-08!57;CL:0000057!3.29e-08!75;CL:0000115!4.39e-07!35;CL:0000359!4.93e-07!32;CL:0002078!7.78e-07!44;CL:0002139!9.00e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.19e-07;55!CL:0000192;4.86e-07;43!CL:0002139;7.79e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.10e-16,121;CL:0002321,2.07e-15,250;CL:0000192,2.35e-09,43;CL:0000514,2.35e-09,43;CL:0000213,7.78e-09,58;CL:0000215,7.78e-09,58;CL:0000187,1.16e-08,55;CL:0000393,1.26e-08,61;CL:0000211,1.26e-08,61;CL:0000680,2.05e-08,58;CL:0000056,2.05e-08,58;CL:0000355,2.05e-08,58;CL:0000057,2.81e-08,76;CL:0000115,1.74e-07,36;CL:0002078,3.27e-07,45;CL:0000359,4.41e-07,32;CL:0002139,8.09e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;4.86e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.63e-25!286;UBERON:0000119!4.55e-24!312;UBERON:0000483!1.02e-23!309;UBERON:0000475!1.19e-22!365;UBERON:0000025!1.61e-21!194;UBERON:0000468!2.71e-21!659;UBERON:0004111!1.28e-20!241;UBERON:0000481!9.87e-20!347;UBERON:0000467!8.35e-18!625;UBERON:0000480!1.75e-17!626;UBERON:0005743!8.27e-17!86;UBERON:0003075!1.26e-16!86;UBERON:0007284!1.26e-16!86;UBERON:0000064!7.69e-16!219;UBERON:0002346!3.04e-15!90;UBERON:0001017!3.91e-15!82;UBERON:0000073!5.45e-15!94;UBERON:0001016!5.45e-15!94;UBERON:0000955!1.37e-14!69;UBERON:0006238!1.37e-14!69;UBERON:0001049!1.42e-14!57;UBERON:0005068!1.42e-14!57;UBERON:0006241!1.42e-14!57;UBERON:0007135!1.42e-14!57;UBERON:0000922!1.83e-14!612;UBERON:0002049!1.99e-14!79;UBERON:0007798!1.99e-14!79;UBERON:0004121!2.82e-14!169;UBERON:0002616!3.55e-14!59;UBERON:0003056!1.54e-13!61;UBERON:0000923!1.59e-13!604;UBERON:0005291!1.59e-13!604;UBERON:0006598!1.59e-13!604;UBERON:0002532!1.59e-13!604;UBERON:0002050!1.59e-13!605;UBERON:0005423!1.59e-13!605;UBERON:0000924!1.72e-13!173;UBERON:0006601!1.72e-13!173;UBERON:0000033!2.20e-13!123;UBERON:0000055!2.79e-12!69;UBERON:0004872!1.22e-11!84;UBERON:0003914!1.61e-11!118;UBERON:0000153!2.96e-11!129;UBERON:0007811!2.96e-11!129;UBERON:0001981!3.62e-11!60;UBERON:0007500!3.62e-11!60;UBERON:0004537!3.62e-11!60;UBERON:0006965!3.62e-11!60;UBERON:0002780!5.07e-11!41;UBERON:0001890!5.07e-11!41;UBERON:0006240!5.07e-11!41;UBERON:0003080!9.32e-11!42;UBERON:0001893!1.61e-10!34;UBERON:0002020!3.32e-10!34;UBERON:0003528!3.32e-10!34;UBERON:0002791!3.99e-10!33;UBERON:0001869!1.46e-09!32;UBERON:0000062!1.67e-09!511;UBERON:0005256!1.80e-09!143;UBERON:0001637!4.06e-09!42;UBERON:0003509!4.06e-09!42;UBERON:0004572!4.06e-09!42;UBERON:0002619!1.70e-08!22;UBERON:0004535!3.02e-08!110;UBERON:0001950!4.56e-08!20;UBERON:0000914!4.60e-08!83;UBERON:0002329!4.60e-08!83;UBERON:0003077!4.60e-08!83;UBERON:0003059!4.60e-08!83;UBERON:0007282!4.60e-08!83;UBERON:0009618!4.60e-08!83;UBERON:0007285!4.60e-08!83;UBERON:0000956!1.01e-07!25;UBERON:0000203!1.01e-07!25;UBERON:0004290!1.20e-07!70;UBERON:0001009!1.21e-07!113;UBERON:0002100!1.21e-07!216;UBERON:0000490!2.14e-07!138;UBERON:0004573!2.25e-07!33;UBERON:0004571!2.25e-07!33;UBERON:0000486!3.27e-07!82;UBERON:0001134!6.12e-07!61;UBERON:0002036!6.12e-07!61;UBERON:0003082!6.12e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.87e-09;34!UBERON:0003528;8.17e-09;34!UBERON:0002020;8.17e-09;34!UBERON:0002791;8.97e-09;32!UBERON:0001869;1.09e-08;32!UBERON:0000073;1.24e-08;53!UBERON:0002616;1.24e-08;53!UBERON:0002619;1.45e-08;22!UBERON:0002780;2.57e-08;41!UBERON:0001890;2.57e-08;41!UBERON:0001950;4.22e-08;20!UBERON:0000956;9.06e-08;25!UBERON:0000203;9.06e-08;25!UBERON:0003914;1.96e-07;74!UBERON:0007500;3.00e-07;56!UBERON:0001981;3.00e-07;56!UBERON:0004537;3.00e-07;56!UBERON:0001637;3.54e-07;42!UBERON:0003509;3.54e-07;42!UBERON:0004572;3.54e-07;42!UBERON:0000055;3.76e-07;65!UBERON:0001017;6.27e-07;75!UBERON:0004573;6.69e-07;33!UBERON:0004571;6.69e-07;33!UBERON:0000955;8.73e-07;68 | |||
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| ||
|short_description=p1@PNPLA6 | |||
}} | }} |
Latest revision as of 20:47, 24 September 2015
Short description: | p1@PNPLA6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PNPLA6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000450331, ENST00000544207, NM_001166113, uc002mgr.1, uc010xjq.1_5end |
EntrezGene: | PNPLA6 |
HGNC: | 16268 |
UniProt: | F5H1D5Q8IY17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.10e-16 | 121 |
embryonic cell | 2.07e-15 | 250 |
smooth muscle cell | 2.35e-09 | 43 |
smooth muscle myoblast | 2.35e-09 | 43 |
lining cell | 7.78e-09 | 58 |
barrier cell | 7.78e-09 | 58 |
muscle cell | 1.16e-08 | 55 |
electrically responsive cell | 1.26e-08 | 61 |
electrically active cell | 1.26e-08 | 61 |
muscle precursor cell | 2.05e-08 | 58 |
myoblast | 2.05e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.05e-08 | 58 |
fibroblast | 2.81e-08 | 76 |
endothelial cell | 1.74e-07 | 36 |
meso-epithelial cell | 3.27e-07 | 45 |
vascular associated smooth muscle cell | 4.41e-07 | 32 |
endothelial cell of vascular tree | 8.09e-07 | 24 |