FFCP PHASE1:Hg19::chr19:6720686..6720694,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:6720686..6720694,- to FFCP PHASE1:Hg19::chr19:6720686..6720694,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=718 | |EntrezGene=718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |HGNC=1318 | ||
|TSSclassifier=strong | |||
|UniProt=P01024 | |UniProt=P01024 | ||
|association_with_transcript=0bp_to_ENST00000245907_5end | |||
|cluster_id=chr19:6720686..6720694,- | |||
|description=CAGE_peak_2_at_C3_5end | |||
|id=chr19:6720686..6720694,- | |||
|ontology_enrichment_celltype=CL:0002194!6.77e-07!63;CL:0000576!6.77e-07!63;CL:0000040!6.77e-07!63;CL:0000559!6.77e-07!63 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.18e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002050!2.63e-17!605;UBERON:0005423!2.63e-17!605;UBERON:0000923!4.58e-17!604;UBERON:0005291!4.58e-17!604;UBERON:0006598!4.58e-17!604;UBERON:0002532!4.58e-17!604;UBERON:0000922!1.33e-16!612;UBERON:0000467!6.02e-14!625;UBERON:0000480!9.48e-14!626;UBERON:0000468!2.65e-13!659;UBERON:0000025!6.42e-13!194;UBERON:0007023!1.52e-12!115;UBERON:0004111!1.54e-12!241;UBERON:0000062!3.06e-12!511;UBERON:0000481!1.33e-11!347;UBERON:0000477!1.66e-11!286;UBERON:0000483!5.03e-11!309;UBERON:0000119!1.98e-10!312;UBERON:0002365!3.09e-09!31;UBERON:0002330!3.09e-09!31;UBERON:0009497!7.84e-08!25;UBERON:0000015!7.84e-08!25;UBERON:0002423!7.84e-08!25;UBERON:0006235!7.84e-08!25;UBERON:0004161!7.84e-08!25;UBERON:0009854!8.38e-08!23;UBERON:0000926!8.94e-08!448;UBERON:0004120!8.94e-08!448;UBERON:0006603!8.94e-08!448;UBERON:0000948!1.02e-07!24;UBERON:0005498!1.02e-07!24;UBERON:0004140!1.02e-07!24;UBERON:0009881!1.02e-07!24;UBERON:0004141!1.02e-07!24;UBERON:0003084!1.02e-07!24;UBERON:0007005!1.02e-07!24;UBERON:0004139!1.02e-07!24;UBERON:0004291!1.02e-07!24;UBERON:0002530!1.14e-07!59;UBERON:0002204!1.14e-07!167;UBERON:0002107!1.27e-07!19;UBERON:0006925!1.27e-07!19;UBERON:0008836!1.27e-07!19;UBERON:0001049!1.31e-07!57;UBERON:0005068!1.31e-07!57;UBERON:0006241!1.31e-07!57;UBERON:0007135!1.31e-07!57;UBERON:0008835!1.90e-07!22;UBERON:0003894!1.90e-07!22;UBERON:0003914!5.13e-07!118;UBERON:0002368!5.99e-07!35;UBERON:0000475!9.75e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.84e-09;19!UBERON:0006925;4.84e-09;19!UBERON:0002365;1.14e-08;31!UBERON:0002330;1.14e-08;31!UBERON:0004573;7.22e-08;33!UBERON:0004571;7.22e-08;33!UBERON:0002423;4.83e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,7.13e-12,192;UBERON:0004111,4.02e-10,240;UBERON:0002050,3.46e-09,564;UBERON:0000923,4.13e-09,560;UBERON:0010316,4.13e-09,560;UBERON:0005291,4.13e-09,560;UBERON:0006598,4.13e-09,560;UBERON:0010317,4.13e-09,560;UBERON:0002532,4.13e-09,560;UBERON:0005423,4.92e-09,581;UBERON:0002107,5.10e-09,19;UBERON:0006925,5.10e-09,19;UBERON:0008836,5.10e-09,19;UBERON:0002365,6.03e-09,31;UBERON:0002330,6.03e-09,31;UBERON:0000483,8.96e-09,306;UBERON:0003914,1.79e-08,117;UBERON:0000119,1.90e-08,309;UBERON:0004573,2.07e-08,33;UBERON:0004571,2.07e-08,33;UBERON:0000922,2.17e-08,592;UBERON:0005256,9.83e-08,122;UBERON:0009854,1.05e-07,23;UBERON:0003104,2.21e-07,160;UBERON:0009142,2.21e-07,160;UBERON:0008835,3.35e-07,22;UBERON:0003894,3.35e-07,22;UBERON:0009497,5.00e-07,25;UBERON:0000015,5.00e-07,25;UBERON:0002423,5.00e-07,25;UBERON:0006235,5.00e-07,25;UBERON:0004161,5.00e-07,25 | |||
|phase1_expression=0,2.14100523890983,0.140954404095971,0,0,0,0,1.89515962028049,2.61185628199839,0.491467873003018,0,0,0,0.618831764800233,1.32558950291166,4.70627602516243,2.41077811209591,3.65155045193687,3.90346239032406,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,0.786728553697808,0,0.154816123316076,0.919421224478927,0.90361775633475,0,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0.32389366601898,1.03030227053675,0.581592955118259,0.377875943688809,0.242584061187816,0.929716147622738,1.6446715520873,1.23882548358041,0.863077176966451,1.2808035326455,0.945928919554341,0,1.93645405075148,0,0.376484679085209,1.91034305040492,0.898893937780338,0.612167784741805,1.60464513538047,0.639337125799041,0.989553900560148,0.797854630486527,2.55734850319616,2.32167390902867,0.56738522469114,1.86846674698672,0,1.5644487552606,0.217188844705117,2.42159801053347,0.736555271975129,1.26584954976354,0.211255286311942,0.212604299965044,0,0.336985893439485,0,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,31.694892620815,1.34140171940727,1.2786256184353,0.361439152384566,0,0.579386075843295,0.795285947051099,5.83961844363163,0,0,0,0.654895377488563,1.45718115317017,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,2.91300197789081,2.58152958673932,0,1.68203280042692,2.1349799145941,0.49333509683432,2.48968828319813,1.0776853765575,0.326923806226917,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0,0,0,1.18800285728205,1.7308685049499,0,0,0,0,0,0,0,2.10333282469236,0.794025282120147,0,0,0.423863802319124,0,0,0,0,0,0,0,0.460249493211497,0.484938170456436,0,0,0.67824236924195,2.12586938479627,1.09098448236334,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,4.17931135228781,0.721879481669586,0.709840800239063,1.01150814046861,1.44606617930089,0.882351781859152,0.653638332277218,0.949082476444386,0.674156540800822,1.17732879075208,0,0,0,3.2925920906512,1.47008711385542,5.07020139287323,0.982827216677626,1.77236972004421,0,0.983907508344908,0,2.19500570817251,1.1240175325762,0,0.370353780634118,0,0,0,0,0,0.866198686566443,0,0.761016608938393,0,0,1.96973604869918,1.40402559083543,3.26988557035202,0,0.839910640994298,2.55195175036296,0.358234090811393,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17086863031111,0,0,0,0,0,0,0,0.857867961948885,5.96883765930587,0,0,1.42156779497018,0,2.41151501647669,3.48613383440118,2.99918973546171,6.08118903205952,3.01354254859276,0,0,0,0,0.144781306667579,0.61642896765115,1.07436577943937,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,7.48418099486753,0,0,0.415941723061614,0,0.315404830067869,2.22568688486155,0.902838299183157,0,0,0,0,0.521301686808497,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.496215615637554,0.306923946576125,0,0,0,0,0,0.154209693802656,0,0.246381468041427,3.11552657510173,0,0.483437798366489,2.80709058424599,0,0,0.182091168006717,0.131124414959424,0,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,1.33953315142039,0,0,2.87132768998086,6.50060246036521,0,0.676695028044854,0.154048617114644,0,0,1.50388342815583,2.0302337147992,0.170453254832202,0.534192213880424,1.65284915360978,0.576570202095319,1.40373983744043,1.31505115112215,0,1.5740617341532,0,3.08033580176089,0.532306030317022,1.73986598415015,2.03856641014312,0.572499546967965,0,0,0.762520775695299,0.255897791311334,3.85145089230528,3.5002357271853,1.56989728039846,0,0.274537029736055,0,1.61745985258653,1.58510321173008,1.68503382495592,0.48763373908959,4.6305563029944,2.11300293513511,0,0.282810863907425,1.13008116620243,2.2054613741845,3.98063385144732,1.31535265576129,1.73632660280006,0,0.202910376962704,0,0,0,0,0,0,3.16661452946496,1.31717957183961,0,0,1.25088746543166,0.670302275535787,2.17781969722645,1.50630081242847,0.86101074534246,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0.980160863924127,0,0,0,0,0,1.91505370132367,0,0,0,0,0.156679895773023,0,0,0,0,0,2.06103206853459,0.614481528616916,0.671028323677248,0.834245708559542,0.390776190804081,0,0,0,0,0,0,1.17206543417515,0,0,0,0.23874448473769,0,0,0.994147647766298,1.96937182974718,2.78271762557265,0,0,1.59398390600856,1.65770349318689,0,0.102268682502155,0.369254416383208,0,0.449341755736634,0.179021174675609,0,1.67693789582787,0,2.22273980289274,1.93866549219044,0.834912883456661,0,0,0,1.44999915086959,0.455173793141999,0,0,0,0,0,0,1.80894657938112,0,0.663475559587348,0.591095237907095,0.219385397153973,1.30726156222788,0,1.46205491157214,3.53220373125704,0,0.269272933229316,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,3.16497096792041,4.08082020397869,0,0,0,0.265372693510018,1.22206028986725,0,0,0,2.42644078730437,4.01288823649394,1.40558667435203,0,0,0,0,1.20990716048664,0,4.04394109622323,0,0,0,0,0,0,0.853828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|phase1_expression=0,2.14100523890983,0.140954404095971,0,0,0,0,1.89515962028049,2.61185628199839,0.491467873003018,0,0,0,0.618831764800233,1.32558950291166,4.70627602516243,2.41077811209591,3.65155045193687,3.90346239032406,0,0,0,0,0,0,0.229240217243854,0,0.0787107813136792,0.786728553697808,0,0.154816123316076,0.919421224478927,0.90361775633475,0,0,0,0,0,0.401088894940283,0.217010870715852,0.447830948479849,0.32389366601898,1.03030227053675,0.581592955118259,0.377875943688809,0.242584061187816,0.929716147622738,1.6446715520873,1.23882548358041,0.863077176966451,1.2808035326455,0.945928919554341,0,1.93645405075148,0,0.376484679085209,1.91034305040492,0.898893937780338,0.612167784741805,1.60464513538047,0.639337125799041,0.989553900560148,0.797854630486527,2.55734850319616,2.32167390902867,0.56738522469114,1.86846674698672,0,1.5644487552606,0.217188844705117,2.42159801053347,0.736555271975129,1.26584954976354,0.211255286311942,0.212604299965044,0,0.336985893439485,0,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,31.694892620815,1.34140171940727,1.2786256184353,0.361439152384566,0,0.579386075843295,0.795285947051099,5.83961844363163,0,0,0,0.654895377488563,1.45718115317017,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,1.22031028774085,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,2.91300197789081,2.58152958673932,0,1.68203280042692,2.1349799145941,0.49333509683432,2.48968828319813,1.0776853765575,0.326923806226917,0,0,0,0.312160076830321,0,0.448346041655403,0,0,0,0,0,0,1.18800285728205,1.7308685049499,0,0,0,0,0,0,0,2.10333282469236,0.794025282120147,0,0,0.423863802319124,0,0,0,0,0,0,0,0.460249493211497,0.484938170456436,0,0,0.67824236924195,2.12586938479627,1.09098448236334,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0,0,4.17931135228781,0.721879481669586,0.709840800239063,1.01150814046861,1.44606617930089,0.882351781859152,0.653638332277218,0.949082476444386,0.674156540800822,1.17732879075208,0,0,0,3.2925920906512,1.47008711385542,5.07020139287323,0.982827216677626,1.77236972004421,0,0.983907508344908,0,2.19500570817251,1.1240175325762,0,0.370353780634118,0,0,0,0,0,0.866198686566443,0,0.761016608938393,0,0,1.96973604869918,1.40402559083543,3.26988557035202,0,0.839910640994298,2.55195175036296,0.358234090811393,0.871901815541886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17086863031111,0,0,0,0,0,0,0,0.857867961948885,5.96883765930587,0,0,1.42156779497018,0,2.41151501647669,3.48613383440118,2.99918973546171,6.08118903205952,3.01354254859276,0,0,0,0,0.144781306667579,0.61642896765115,1.07436577943937,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,7.48418099486753,0,0,0.415941723061614,0,0.315404830067869,2.22568688486155,0.902838299183157,0,0,0,0,0.521301686808497,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.496215615637554,0.306923946576125,0,0,0,0,0,0.154209693802656,0,0.246381468041427,3.11552657510173,0,0.483437798366489,2.80709058424599,0,0,0.182091168006717,0.131124414959424,0,0.539107359730903,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,1.33953315142039,0,0,2.87132768998086,6.50060246036521,0,0.676695028044854,0.154048617114644,0,0,1.50388342815583,2.0302337147992,0.170453254832202,0.534192213880424,1.65284915360978,0.576570202095319,1.40373983744043,1.31505115112215,0,1.5740617341532,0,3.08033580176089,0.532306030317022,1.73986598415015,2.03856641014312,0.572499546967965,0,0,0.762520775695299,0.255897791311334,3.85145089230528,3.5002357271853,1.56989728039846,0,0.274537029736055,0,1.61745985258653,1.58510321173008,1.68503382495592,0.48763373908959,4.6305563029944,2.11300293513511,0,0.282810863907425,1.13008116620243,2.2054613741845,3.98063385144732,1.31535265576129,1.73632660280006,0,0.202910376962704,0,0,0,0,0,0,3.16661452946496,1.31717957183961,0,0,1.25088746543166,0.670302275535787,2.17781969722645,1.50630081242847,0.86101074534246,0,0,0.229723400206959,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0.980160863924127,0,0,0,0,0,1.91505370132367,0,0,0,0,0.156679895773023,0,0,0,0,0,2.06103206853459,0.614481528616916,0.671028323677248,0.834245708559542,0.390776190804081,0,0,0,0,0,0,1.17206543417515,0,0,0,0.23874448473769,0,0,0.994147647766298,1.96937182974718,2.78271762557265,0,0,1.59398390600856,1.65770349318689,0,0.102268682502155,0.369254416383208,0,0.449341755736634,0.179021174675609,0,1.67693789582787,0,2.22273980289274,1.93866549219044,0.834912883456661,0,0,0,1.44999915086959,0.455173793141999,0,0,0,0,0,0,1.80894657938112,0,0.663475559587348,0.591095237907095,0.219385397153973,1.30726156222788,0,1.46205491157214,3.53220373125704,0,0.269272933229316,0,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,3.16497096792041,4.08082020397869,0,0,0,0.265372693510018,1.22206028986725,0,0,0,2.42644078730437,4.01288823649394,1.40558667435203,0,0,0,0,1.20990716048664,0,4.04394109622323,0,0,0,0,0,0,0.853828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| ||
|short_description=p2@C3 | |||
}} | }} |
Latest revision as of 18:50, 24 September 2015
Short description: | p2@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000245907_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | P01024 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tube | 7.13e-12 | 192 |
anatomical conduit | 4.02e-10 | 240 |
embryonic structure | 3.46e-09 | 564 |
germ layer | 4.13e-09 | 560 |
germ layer / neural crest | 4.13e-09 | 560 |
embryonic tissue | 4.13e-09 | 560 |
presumptive structure | 4.13e-09 | 560 |
germ layer / neural crest derived structure | 4.13e-09 | 560 |
epiblast (generic) | 4.13e-09 | 560 |
developing anatomical structure | 4.92e-09 | 581 |
liver | 5.10e-09 | 19 |
digestive gland | 5.10e-09 | 19 |
liver bud | 5.10e-09 | 19 |
exocrine gland | 6.03e-09 | 31 |
exocrine system | 6.03e-09 | 31 |
epithelium | 8.96e-09 | 306 |
epithelial tube | 1.79e-08 | 117 |
cell layer | 1.90e-08 | 309 |
systemic artery | 2.07e-08 | 33 |
systemic arterial system | 2.07e-08 | 33 |
embryo | 2.17e-08 | 592 |
trunk mesenchyme | 9.83e-08 | 122 |
digestive tract diverticulum | 1.05e-07 | 23 |
mesenchyme | 2.21e-07 | 160 |
entire embryonic mesenchyme | 2.21e-07 | 160 |
hepatic diverticulum | 3.35e-07 | 22 |
liver primordium | 3.35e-07 | 22 |
epithelium of foregut-midgut junction | 5.00e-07 | 25 |
anatomical boundary | 5.00e-07 | 25 |
hepatobiliary system | 5.00e-07 | 25 |
foregut-midgut junction | 5.00e-07 | 25 |
septum transversum | 5.00e-07 | 25 |