FFCP PHASE1:Hg19::chr19:6586908..6586931,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:6586908..6586931,- to FFCP PHASE1:Hg19::chr19:6586908..6586931,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:6586908..6586931,- | |||
|coexpression_cluster_id=C763 | |||
|description=CAGE_peak_at_chr19:6586908..6586931,- | |||
|id=chr19:6586908..6586931,- | |||
|ontology_enrichment_celltype=CL:0000945!5.67e-08!24;CL:0000826!5.67e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.55e-17;24!CL:0000542;9.78e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.43e-17,24;CL:0000826,1.43e-17,24;CL:0000838,3.36e-14,52;CL:0000542,6.78e-14,53;CL:0000051,6.78e-14,53;CL:0000988,5.38e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;9.78e-10;53 | |||
|ontology_enrichment_disease=DOID:2531!2.36e-09!51;DOID:0060083!2.36e-09!51;DOID:14566!5.84e-08!239;DOID:162!7.65e-08!235;DOID:1240!5.28e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.19e-11;10!DOID:6193;2.09e-08;1!DOID:0060060;4.56e-08;1!DOID:0060061;4.56e-08;1!DOID:8691;4.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.21e-11,10;DOID:6193,1.75e-08,1;DOID:0060060,5.43e-08,1;DOID:0060061,5.43e-08,1;DOID:8691,5.43e-08,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.94e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.94e-07,10;UBERON:0000358,3.94e-07,10;UBERON:0000307,3.94e-07,10;UBERON:0000091,3.94e-07,10;UBERON:0000087,3.94e-07,10;UBERON:0007010,3.94e-07,10;UBERON:0007806,3.94e-07,10;UBERON:0008780,3.94e-07,10;UBERON:0005728,3.94e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59143007015371,4.10502947249729,2.36132343941038,0,0,0.154816123316076,0.919421224478927,0,0,0.387336002901508,2.41687695228617,0,0,0,0.217010870715852,0,0,0,0,0.755751887377619,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0.622822248995575,0.75374599577023,0,0,0,0,0,0,0.637812899895131,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763890732835,2.93618594685469,1.52909291250092,0,0,0,0,0,0.205601498999509,0.668745981562712,0,0,0,0.557052284425868,0.883817722424512,0,0,2.68991771423918,1.69077151827842,0.986627427622057,0.276350017785848,0.579606171470105,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.640672166455702,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0.723033089650446,0.55146986366197,0.653638332277218,0.71181185733329,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.824125183365091,0.990113999047056,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.640944426764839,0,0,0.929015875628594,0.28853842595289,0.0711418433484141,0,0.399158742865633,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,5.01268954180134,0.338583555603207,0,0.201799707191048,4.68430861459359,0,0.614481528616916,0.447352215784832,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0,0,0.121360521749513,1.78309414843965,0.284136146806413,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,2.33861130376032,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0,0.21787692703798,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0,8.30259160305741,6.05463300837864,6.16089502082187,0,0,0,0.729819156862664,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0.901940516486955,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,2.75177651954586,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,2.10309883423452,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0.169346664131569,0,0,0,0.137539436597234,0,0,0,0,0.670869375198532,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,2.37133958277533,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0.57785949122191,0,0,0,0.694567422971502,0,0,0,0.219284049578707,0.353378291891762,0.38582807654183,0.337884881306145,1.02496607435179,0.690860683462397,0,0,0,0,0.654261577023377,0,0,0,1.19992437512958,0.640150378164845,0,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0.40341013740704,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.691403925334676,0,0,0,0.236387681767936,0,0,0,0.280272163313789,0,0,1.43325506366115,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0.118332000730565,0.170426809518315,0,0.4582137370881,0.31020638566432,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0,0.339854229375634,0,0,1.79894080664872,0,0,0,0,0.458729283404541,0.143339583151451,0,0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| |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59143007015371,4.10502947249729,2.36132343941038,0,0,0.154816123316076,0.919421224478927,0,0,0.387336002901508,2.41687695228617,0,0,0,0.217010870715852,0,0,0,0,0.755751887377619,0.242584061187816,0,0,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0.622822248995575,0.75374599577023,0,0,0,0,0,0,0.637812899895131,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763890732835,2.93618594685469,1.52909291250092,0,0,0,0,0,0.205601498999509,0.668745981562712,0,0,0,0.557052284425868,0.883817722424512,0,0,2.68991771423918,1.69077151827842,0.986627427622057,0.276350017785848,0.579606171470105,0.14828656316206,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.640672166455702,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0,0.723033089650446,0.55146986366197,0.653638332277218,0.71181185733329,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0,0,0.380508304469197,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,1.71072446022705,0,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0.270946437543853,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.824125183365091,0.990113999047056,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0.640944426764839,0,0,0.929015875628594,0.28853842595289,0.0711418433484141,0,0.399158742865633,0,0.211673582723883,0,0.280797178113459,0,0.156679895773023,5.01268954180134,0.338583555603207,0,0.201799707191048,4.68430861459359,0,0.614481528616916,0.447352215784832,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0,0,0,0,0.121360521749513,1.78309414843965,0.284136146806413,0,0.296964680832639,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0,2.33861130376032,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.110579259931225,0,0,0.21787692703798,0,0.153900517007594,0,0,0.0897576444097721,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0.995261931078505,0,0,8.30259160305741,6.05463300837864,6.16089502082187,0,0,0,0.729819156862664,0,0,0.394584402849391,0,0.30607276163049,0.063186579628488,0.901940516486955,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0,2.75177651954586,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.0882561266915003,0.225980740780532,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,2.10309883423452,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0.169346664131569,0,0,0,0.137539436597234,0,0,0,0,0.670869375198532,0,0,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,2.37133958277533,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.138348634936231,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04349012362347,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0,0,0.57785949122191,0,0,0,0.694567422971502,0,0,0,0.219284049578707,0.353378291891762,0.38582807654183,0.337884881306145,1.02496607435179,0.690860683462397,0,0,0,0,0.654261577023377,0,0,0,1.19992437512958,0.640150378164845,0,0,0,0,0.622077260032973,0,0,0,0,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0.40341013740704,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.691403925334676,0,0,0,0.236387681767936,0,0,0,0.280272163313789,0,0,1.43325506366115,0.0714765441766563,0,0,0,0,0.414432328326074,0,0,0,0.118332000730565,0.170426809518315,0,0.4582137370881,0.31020638566432,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0.233939463462106,0,0.118920090777569,0,0,0.150962843566674,0,0,0,0.245148321753905,0,0,0,0,0.339854229375634,0,0,1.79894080664872,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,1.0580536810308,0,0.462175628631418,0,0,0,0.126698501011437,0,0.26721740526556,0.36757959813938,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0.33639558774184,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | ||
|short_description=p@chr19:6586908..6586931,- | |||
}} | }} |
Latest revision as of 18:12, 27 July 2015
Short description: | p@chr19:6586908..6586931, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:6586908..6586931, - |
Coexpression cluster: | C763_cord_B_splenic_xeroderma_b_hairy_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.43e-17 | 24 |
pro-B cell | 1.43e-17 | 24 |
lymphoid lineage restricted progenitor cell | 3.36e-14 | 52 |
lymphocyte | 6.78e-14 | 53 |
common lymphoid progenitor | 6.78e-14 | 53 |
hematopoietic cell | 5.38e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.94e-07 | 10 |
blastocyst | 3.94e-07 | 10 |
blastula | 3.94e-07 | 10 |
bilaminar disc | 3.94e-07 | 10 |
inner cell mass | 3.94e-07 | 10 |
cleaving embryo | 3.94e-07 | 10 |
connecting stalk | 3.94e-07 | 10 |
inner cell mass derived epiblast | 3.94e-07 | 10 |
extraembryonic mesoderm | 3.94e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.21e-11 | 10 |
epithelioid sarcoma | 1.75e-08 | 1 |
non-Hodgkin lymphoma | 5.43e-08 | 1 |
cutaneous T cell lymphoma | 5.43e-08 | 1 |
mycosis fungoides | 5.43e-08 | 1 |