FFCP PHASE1:Hg19::chr19:55795351..55795394,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:55795351..55795394,+ to FFCP PHASE1:Hg19::chr19:55795351..55795394,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84446 | |EntrezGene=84446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18994 | |HGNC=18994 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDC3 | |UniProt=Q8TDC3 | ||
|association_with_transcript=-139bp_to_ENST00000309383,NM_032430,uc002qkg.2_5end | |||
|cluster_id=chr19:55795351..55795394,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_BRSK1_5end | |||
|id=chr19:55795351..55795394,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.92e-10!180;CL:0000133!3.04e-09!59;CL:0002319!2.27e-08!25;CL:0000393!8.25e-07!60;CL:0000211!8.25e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.77e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,7.33e-08,59;CL:0002319,2.17e-07,25;CL:0000047,4.89e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.16e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;4.68e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,4.92e-07,10;DOID:3095,6.65e-07,22;DOID:2994,6.65e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.63e-43!94;UBERON:0001016!9.63e-43!94;UBERON:0005743!9.60e-41!86;UBERON:0001017!2.06e-39!82;UBERON:0001049!6.09e-33!57;UBERON:0005068!6.09e-33!57;UBERON:0006241!6.09e-33!57;UBERON:0007135!6.09e-33!57;UBERON:0000955!1.72e-32!69;UBERON:0006238!1.72e-32!69;UBERON:0002346!5.48e-31!90;UBERON:0003075!1.78e-29!86;UBERON:0007284!1.78e-29!86;UBERON:0002616!3.14e-29!59;UBERON:0002780!5.31e-26!41;UBERON:0001890!5.31e-26!41;UBERON:0006240!5.31e-26!41;UBERON:0003080!8.31e-26!42;UBERON:0000924!7.12e-25!173;UBERON:0006601!7.12e-25!173;UBERON:0004121!1.74e-23!169;UBERON:0003056!1.45e-22!61;UBERON:0001893!8.23e-22!34;UBERON:0002020!1.06e-21!34;UBERON:0003528!1.06e-21!34;UBERON:0000475!3.68e-21!365;UBERON:0002791!4.40e-21!33;UBERON:0001869!1.01e-20!32;UBERON:0000033!1.12e-20!123;UBERON:0000153!4.43e-20!129;UBERON:0007811!4.43e-20!129;UBERON:0000956!3.27e-16!25;UBERON:0000203!3.27e-16!25;UBERON:0002619!4.40e-15!22;UBERON:0007023!5.72e-14!115;UBERON:0001950!9.84e-14!20;UBERON:0000481!1.49e-12!347;UBERON:0000025!2.17e-12!194;UBERON:0000119!2.63e-12!312;UBERON:0000483!3.32e-12!309;UBERON:0004111!9.64e-10!241;UBERON:0000468!2.59e-08!659;UBERON:0003076!2.91e-08!15;UBERON:0003057!2.91e-08!15;UBERON:0000477!3.24e-08!286;UBERON:0000922!5.00e-08!612;UBERON:0002420!3.78e-07!9;UBERON:0007245!3.78e-07!9;UBERON:0010009!3.78e-07!9;UBERON:0010011!3.78e-07!9;UBERON:0000454!3.78e-07!9;UBERON:0004732!4.41e-07!13;UBERON:0002308!6.03e-07!9;UBERON:0000125!6.03e-07!9;UBERON:0004733!6.54e-07!12;UBERON:0002028!6.54e-07!12;UBERON:0007277!6.54e-07!12;UBERON:0000480!8.62e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;7.72e-27;34!UBERON:0002780;1.52e-26;41!UBERON:0001890;1.52e-26;41!UBERON:0001869;1.68e-26;32!UBERON:0003528;1.74e-26;34!UBERON:0002020;1.74e-26;34!UBERON:0002791;3.01e-26;32!UBERON:0000073;6.22e-26;53!UBERON:0002616;6.22e-26;53!UBERON:0000956;6.12e-23;25!UBERON:0000203;6.12e-23;25!UBERON:0002619;1.53e-21;22!UBERON:0001950;1.35e-19;20!UBERON:0000955;3.85e-19;68!UBERON:0001016;4.69e-18;83!UBERON:0001017;7.98e-18;75!UBERON:0002420;1.29e-09;9!UBERON:0007245;1.29e-09;9!UBERON:0010009;1.29e-09;9!UBERON:0010011;1.29e-09;9!UBERON:0000454;1.29e-09;9!UBERON:0000125;2.42e-09;9!UBERON:0002308;2.42e-09;9!UBERON:0004732;1.04e-08;13!UBERON:0004733;1.92e-08;12!UBERON:0002028;1.92e-08;12!UBERON:0009663;1.22e-07;7!UBERON:0000200;1.68e-07;6!UBERON:0001894;2.17e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.28e-52,89;UBERON:0001017,2.52e-51,81;UBERON:0001049,1.87e-46,56;UBERON:0005068,1.87e-46,56;UBERON:0006241,1.87e-46,56;UBERON:0007135,1.87e-46,56;UBERON:0000073,2.31e-44,53;UBERON:0002616,2.31e-44,53;UBERON:0002346,1.86e-43,86;UBERON:0000955,1.64e-41,68;UBERON:0006238,1.64e-41,68;UBERON:0003075,2.71e-41,82;UBERON:0007284,2.71e-41,82;UBERON:0002780,3.78e-37,41;UBERON:0001890,3.78e-37,41;UBERON:0003080,3.78e-37,41;UBERON:0006240,3.78e-37,41;UBERON:0003056,3.83e-33,61;UBERON:0010371,8.78e-32,104;UBERON:0001893,3.94e-31,34;UBERON:0003528,5.69e-31,34;UBERON:0002020,5.69e-31,34;UBERON:0004121,1.85e-30,171;UBERON:0000924,1.85e-30,171;UBERON:0006601,1.85e-30,171;UBERON:0001869,1.45e-29,32;UBERON:0002791,3.17e-29,32;UBERON:0000956,4.34e-23,25;UBERON:0000203,4.34e-23,25;UBERON:0010314,5.09e-22,132;UBERON:0002619,1.75e-21,22;UBERON:0001950,1.52e-19,20;UBERON:0011216,2.98e-17,223;UBERON:0000025,1.93e-15,192;UBERON:0007023,2.89e-15,114;UBERON:0003076,2.22e-10,15;UBERON:0003057,2.22e-10,15;UBERON:0000483,3.09e-10,306;UBERON:0004111,4.52e-10,240;UBERON:0000119,7.84e-10,309;UBERON:0002420,1.47e-09,9;UBERON:0007245,1.47e-09,9;UBERON:0010009,1.47e-09,9;UBERON:0010011,1.47e-09,9;UBERON:0000454,1.47e-09,9;UBERON:0000125,2.85e-09,9;UBERON:0002308,2.85e-09,9;UBERON:0004732,1.02e-08,13;UBERON:0004733,1.86e-08,12;UBERON:0002028,1.86e-08,12;UBERON:0007277,1.86e-08,12;UBERON:0009663,1.38e-07,7;UBERON:0000200,1.73e-07,6;UBERON:0001894,2.36e-07,7;UBERON:0006222,2.36e-07,7 | |||
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| ||
|short_description=p1@BRSK1 | |||
}} | }} |
Latest revision as of 01:06, 20 September 2015
Short description: | p1@BRSK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BRSK1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -139bp_to_ENST00000309383, NM_032430, uc002qkg.2_5end |
EntrezGene: | BRSK1 |
HGNC: | 18994 |
UniProt: | Q8TDC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 7.33e-08 | 59 |
neural cell | 2.17e-07 | 25 |
neuronal stem cell | 4.89e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 4.92e-07 | 10 |
germ cell and embryonal cancer | 6.65e-07 | 22 |
germ cell cancer | 6.65e-07 | 22 |