FFCP PHASE1:Hg19::chr19:49842010..49842054,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:49842010..49842054,+ to FFCP PHASE1:Hg19::chr19:49842010..49842054,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:49842010..49842054,+ | |||
|coexpression_cluster_id=C3811 | |||
|description=CAGE_peak_at_chr19:49842010..49842054,+ | |||
|id=chr19:49842010..49842054,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.05e-84!172;CL:0000566!4.05e-84!172;CL:0000738!9.70e-83!140;CL:0002032!7.22e-80!165;CL:0000837!7.22e-80!165;CL:0000988!2.06e-76!182;CL:0002087!2.31e-70!119;CL:0002031!4.82e-70!124;CL:0000763!2.35e-47!112;CL:0000049!2.35e-47!112;CL:0000766!9.26e-46!76;CL:0000557!5.58e-41!71;CL:0000839!3.32e-39!70;CL:0002009!2.34e-38!65;CL:0002194!1.53e-37!63;CL:0000576!1.53e-37!63;CL:0000040!1.53e-37!63;CL:0000559!1.53e-37!63;CL:0002057!2.66e-36!42;CL:0000860!1.36e-32!45;CL:0000542!1.41e-27!53;CL:0000051!1.41e-27!53;CL:0000838!4.33e-27!52;CL:0000945!6.17e-18!24;CL:0000826!6.17e-18!24;CL:0000134!7.26e-16!358;CL:0002320!9.91e-15!365;CL:0000236!8.50e-13!14;CL:0000791!3.29e-11!18;CL:0000789!3.29e-11!18;CL:0002420!3.29e-11!18;CL:0002419!3.29e-11!18;CL:0000790!3.29e-11!18;CL:0000219!6.98e-11!390;CL:0000084!2.89e-09!25;CL:0000827!2.89e-09!25;CL:0002393!1.07e-08!9;CL:0002397!1.07e-08!9;CL:0000625!5.39e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.45e-35;33!CL:0002057;2.45e-35;33!CL:0000473;4.23e-34;39!CL:0000234;4.23e-34;39!CL:0000576;1.44e-33;48!CL:0000766;2.09e-30;69!CL:0002087;5.38e-26;104!CL:0000738;2.00e-21;136!CL:0000945;1.29e-20;24!CL:0000542;2.80e-19;53!CL:0000763;2.42e-18;100!CL:0000236;2.29e-16;13!CL:0000988;7.74e-16;177!CL:0000791;6.87e-15;18!CL:0000789;6.87e-15;18!CL:0002419;6.87e-15;18!CL:0000084;9.79e-11;25!CL:0000219;1.52e-09;193!CL:0000625;3.37e-09;11!CL:0002393;5.31e-08;6!CL:0002397;5.31e-08;6!CL:0000094;1.73e-07;8!CL:0000235;4.51e-07;6!CL:0000624;9.82e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.21e-107,136;CL:0000037,3.02e-101,168;CL:0002032,2.17e-95,161;CL:0000837,2.17e-95,161;CL:0002087,7.03e-95,115;CL:0000988,4.11e-94,177;CL:0002031,3.25e-93,120;CL:0000766,6.03e-67,72;CL:0000557,1.36e-58,67;CL:0000839,6.33e-58,66;CL:0000763,1.54e-56,108;CL:0000049,1.54e-56,108;CL:0002194,1.89e-55,59;CL:0000576,1.89e-55,59;CL:0000040,1.89e-55,59;CL:0000559,1.89e-55,59;CL:0000473,6.15e-55,48;CL:0000234,6.15e-55,48;CL:0002009,7.38e-55,61;CL:0000860,4.32e-49,42;CL:0002057,4.32e-49,42;CL:0000542,1.17e-32,53;CL:0000051,1.17e-32,53;CL:0000838,5.34e-32,52;CL:0000134,7.21e-28,354;CL:0002320,1.31e-26,361;CL:0000219,3.28e-22,386;CL:0000945,9.94e-21,24;CL:0000826,9.94e-21,24;CL:0000236,3.69e-17,14;CL:0000048,6.39e-17,427;CL:0000034,7.94e-17,441;CL:0000723,3.35e-16,433;CL:0000791,6.06e-15,18;CL:0000789,6.06e-15,18;CL:0002420,6.06e-15,18;CL:0002419,6.06e-15,18;CL:0000790,6.06e-15,18;CL:0002393,2.65e-11,9;CL:0002397,2.65e-11,9;CL:0000084,9.43e-11,25;CL:0000827,9.43e-11,25;CL:0000625,3.43e-09,11;CL:0000094,2.08e-07,8;CL:0000235,4.17e-07,6;CL:0000624,7.39e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.95e-35;42!CL:0000051;2.80e-19;53!CL:0000049;3.46e-16;108!CL:0000790;6.87e-15;18 | |||
|ontology_enrichment_disease=DOID:2531!8.48e-08!51;DOID:0060083!8.48e-08!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.44e-46!102;UBERON:0003061!1.44e-46!102;UBERON:0002193!3.80e-42!112;UBERON:0002371!5.03e-36!80;UBERON:0001474!1.15e-31!86;UBERON:0002405!3.00e-26!115;UBERON:0004765!3.36e-23!101;UBERON:0001434!3.36e-23!101;UBERON:0002384!1.26e-13!375;UBERON:0003081!2.78e-10!216;UBERON:0007023!4.01e-10!115;UBERON:0000178!2.57e-07!15;UBERON:0000179!2.57e-07!15;UBERON:0000463!2.57e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.30e-10;15!UBERON:0000179;5.30e-10;15!UBERON:0000463;5.30e-10;15!UBERON:0002390;6.90e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.47e-66,98;UBERON:0003061,4.47e-66,98;UBERON:0002193,4.75e-61,108;UBERON:0002371,1.57e-52,76;UBERON:0002405,4.43e-51,93;UBERON:0001474,4.30e-47,82;UBERON:0004765,5.46e-41,90;UBERON:0001434,9.20e-35,100;UBERON:0002384,6.70e-25,371;UBERON:0003081,2.01e-19,203;UBERON:0002204,5.18e-13,167;UBERON:0000178,5.69e-10,15;UBERON:0000179,5.69e-10,15;UBERON:0000463,5.69e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2857764471619,1.80621296789881,1.8890587515283,4.32700704533794,3.0706351847777,4.02521920621798,0,0,0,3.71842562785448,0.995184627411951,1.46800219667424,3.32397245119126,8.62341124121609,6.72733699219141,2.91090116511902,2.91504299417082,5.15151135268373,9.01469080433301,10.9584023669755,6.30718559088322,9.99444858694444,7.40102198439286,5.26500830521676,15.5353891853961,7.42866048934392,6.3850202069918,5.5159308917859,4.51839278508678,5.41705946377367,13.1769637679823,10.3704337021981,4.71919317334678,8.57034898638527,6.73950956859797,5.75403413219137,10.2253903057882,12.1672831149195,12.7867425159808,9.57690487474327,3.40431134814684,6.22822248995575,8.29120595347253,8.86520961314342,8.03598725408932,7.87019353423379,6.62899744777616,5.37986058649504,11.1965301745329,8.71677629856678,4.82214884669265,6.51506060649672,6.00707571366025,5.30394436100364,3.99017841237748,13.9241674039363,6.57590953552682,29.9193615584249,27.8530691743687,23.1272406004524,19.2028600154928,34.0336588980611,19.5415829584524,23.797615420255,23.8513438633841,34.1527781465669,33.4725197941435,36.698229900022,1.32171328579026,3.36305137788922,1.58030450865046,1.96709770113833,7.07419372948497,5.75684197198626,3.34372990781356,3.58514493296949,5.20792586308207,7.79306913631645,5.12488101671798,5.30290633454707,5.09527957542329,5.1452734115353,6.27647466655808,4.55207716459574,4.27538551969558,6.63240042686036,3.47763702882063,4.89345658434799,5.08327573370455,8.36284190439814,2.37949619664889,2.68254345521345,4.46715679127419,6.83153168452658,6.37130828648194,2.60433381542567,2.85135613334512,3.46322773878877,3.07167866770604,0,4.73554504088034,6.56902397536837,2.62088766192152,10.4301676355568,4.19990771260117,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.649094787309367,0,1.99436940778298,3.10037811596945,2.85997455390064,4.08603251462521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46217006087397,1.8720341211139,2.97262324577457,0,0,0,0,0,0,1.47798971368783,5.28290604079356,6.21984346622316,4.4677185559258,5.55466707076072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,6.02708509718552,14.7583757638122,0,0,0,0,0,0,1.12085143993527,2.36436912242313,7.97822026980214,3.20857590699371,0,0,0,0,0,20.9721966705211,47.865833472644,10.7748033493369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75566460082641,13.1585662499356,6.61710858381355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,5.07447609232169,1.52927441428475,14.8108268665282,6.19402616190251,3.29089818468955,1.29694662238543,4.86028293514303,11.1037524681198,0,0,0,1.67222857613147,0,0,0,1.59663497146253,0.5745161103971,4.02179807175377,4.86932910411833,2.52717460302113,0,0.94007937463814,2.50634477090067,1.35433422241283,0,0.403599414382095,1.27753871307098,2.40453741329035,2.15068535015921,1.3420566473545,1.83534055883099,2.9308214310306,0,1.23087398947712,1.08182271390393,0,0,0,0.879049075631364,0,0.222886768554957,0.284136146806413,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0,0,0,0.398495976502139,3.59169090190492,0,0,3.07712013652674,0,0,0,4.60415133204185,0.690503839458535,7.18449277040819,0,0.969332746095218,0.185536196323703,0,0,0,0,0.1137934482855,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0.295547618953547,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0.533034776018635,4.08773192782946,0,0.498635045700469,0,0.19606253431774,0,0,0.317873157960757,0.210998064528027,0,0,0,0.995261931078505,0.176915129006678,0.611030144933625,0,0,0,0.404406797884062,0,0,14.0490187696063,0,0,0,0,0.30607276163049,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0.126621591911757,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.592713324460491,0.795229689809303,0.136203406111576,0,0,0,0.449947783103001,1.5476039091159,0.303747783290123,0,0.157611414598396,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0.574647645245373,0,0,0,1.32506888912221,0.129282956361551,0.39669780522807,0,0,1.06787412567695,0.157204305099666,2.07119527673598,8.43482237080316,0.988058159489721,4.26274094333136,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0,0.443716206147409,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.779441235357554,0.265729680626726,2.28991551958182,0,0,0,0,1.28030075632969,2.92765465423387,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078861745001253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| ||
|short_description=p@chr19:49842010..49842054,+ | |||
}} | }} |
Latest revision as of 16:02, 27 July 2015
Short description: | p@chr19:49842010..49842054, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:49842010..49842054, + |
Coexpression cluster: | C3811_Neutrophils_CD19_CD14CD16_CD14_migratory_Eosinophils_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.47e-66 | 98 |
blood island | 4.47e-66 | 98 |
hemolymphoid system | 4.75e-61 | 108 |
bone marrow | 1.57e-52 | 76 |
immune system | 4.43e-51 | 93 |
bone element | 4.30e-47 | 82 |
skeletal element | 5.46e-41 | 90 |
skeletal system | 9.20e-35 | 100 |
connective tissue | 6.70e-25 | 371 |
lateral plate mesoderm | 2.01e-19 | 203 |
musculoskeletal system | 5.18e-13 | 167 |
blood | 5.69e-10 | 15 |
haemolymphatic fluid | 5.69e-10 | 15 |
organism substance | 5.69e-10 | 15 |