FFCP PHASE1:Hg19::chr19:4969116..4969131,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:4969116..4969131,+ to FFCP PHASE1:Hg19::chr19:4969116..4969131,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23030 | |EntrezGene=23030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29136 | |HGNC=29136 | ||
|TSSclassifier=strong | |||
|UniProt=O94953 | |UniProt=O94953 | ||
|association_with_transcript=0bp_to_ENST00000159111,ENST00000381759,NM_015015,uc002mbq.3,uc010xil.1_5end | |||
|cluster_id=chr19:4969116..4969131,+ | |||
|coexpression_cluster_id=C1387 | |||
|description=CAGE_peak_1_at_KDM4B_5end | |||
|id=chr19:4969116..4969131,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.33e-08!42 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.33e-08,42;CL:0002057,4.33e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.40e-20!115;UBERON:0001049!1.02e-10!57;UBERON:0005068!1.02e-10!57;UBERON:0006241!1.02e-10!57;UBERON:0007135!1.02e-10!57;UBERON:0001017!2.53e-09!82;UBERON:0002616!2.82e-09!59;UBERON:0005743!1.18e-08!86;UBERON:0003081!2.78e-08!216;UBERON:0000073!2.90e-08!94;UBERON:0001016!2.90e-08!94;UBERON:0000955!3.02e-08!69;UBERON:0006238!3.02e-08!69;UBERON:0003075!7.07e-08!86;UBERON:0007284!7.07e-08!86;UBERON:0003080!1.26e-07!42;UBERON:0002346!2.34e-07!90;UBERON:0002780!3.03e-07!41;UBERON:0001890!3.03e-07!41;UBERON:0006240!3.03e-07!41 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.82e-20,114;UBERON:0001049,2.58e-10,56;UBERON:0005068,2.58e-10,56;UBERON:0006241,2.58e-10,56;UBERON:0007135,2.58e-10,56;UBERON:0000073,9.79e-10,53;UBERON:0002616,9.79e-10,53;UBERON:0003075,2.63e-09,82;UBERON:0007284,2.63e-09,82;UBERON:0003081,4.71e-09,203;UBERON:0001017,5.56e-09,81;UBERON:0002346,1.11e-08,86;UBERON:0001016,1.56e-08,89;UBERON:0000955,6.62e-08,68;UBERON:0006238,6.62e-08,68;UBERON:0002780,3.03e-07,41;UBERON:0001890,3.03e-07,41;UBERON:0003080,3.03e-07,41;UBERON:0006240,3.03e-07,41 | |||
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| ||
|short_description=p1@KDM4B | |||
}} | }} |
Latest revision as of 06:33, 19 September 2015
Short description: | p1@KDM4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KDM4B_5end |
Coexpression cluster: | C1387_Neutrophils_Eosinophils_Whole_brain_parietal_optic_temporal |
Association with transcript: | 0bp_to_ENST00000159111, ENST00000381759, NM_015015, uc002mbq.3, uc010xil.1_5end |
EntrezGene: | KDM4B |
HGNC: | 29136 |
UniProt: | O94953 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.33e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.33e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.82e-20 | 114 |
neural tube | 2.58e-10 | 56 |
neural rod | 2.58e-10 | 56 |
future spinal cord | 2.58e-10 | 56 |
neural keel | 2.58e-10 | 56 |
regional part of nervous system | 9.79e-10 | 53 |
regional part of brain | 9.79e-10 | 53 |
neural plate | 2.63e-09 | 82 |
presumptive neural plate | 2.63e-09 | 82 |
lateral plate mesoderm | 4.71e-09 | 203 |
central nervous system | 5.56e-09 | 81 |
neurectoderm | 1.11e-08 | 86 |
nervous system | 1.56e-08 | 89 |
brain | 6.62e-08 | 68 |
future brain | 6.62e-08 | 68 |
regional part of forebrain | 3.03e-07 | 41 |
forebrain | 3.03e-07 | 41 |
anterior neural tube | 3.03e-07 | 41 |
future forebrain | 3.03e-07 | 41 |