FFCP PHASE1:Hg19::chr19:46916678..46916710,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:46916678..46916710,- to FFCP PHASE1:Hg19::chr19:46916678..46916710,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83987 | |EntrezGene=83987 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25367 | |HGNC=25367 | ||
|TSSclassifier=strong | |||
|UniProt=F5GX02 | |UniProt=F5GX02 | ||
|association_with_transcript=115bp_to_ENST00000540252_5end | |||
|cluster_id=chr19:46916678..46916710,- | |||
|coexpression_cluster_id=C3805 | |||
|description=CAGE_peak_3_at_CCDC8_5end | |||
|id=chr19:46916678..46916710,- | |||
|ontology_enrichment_celltype=CL:0000055!8.56e-13!180;CL:0000057!4.97e-08!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,9.72e-07,61;CL:0000211,9.72e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.22e-14!365;UBERON:0003103!1.15e-13!69;UBERON:0000481!4.62e-13!347;UBERON:0000468!1.49e-12!659;UBERON:0003886!2.66e-08!63;UBERON:0002100!2.84e-08!216;UBERON:0000922!3.69e-08!612;UBERON:0000464!5.67e-08!104;UBERON:0000119!5.67e-08!312;UBERON:0002553!6.06e-08!70;UBERON:0007100!6.30e-08!27;UBERON:0000483!2.75e-07!309;UBERON:0000467!3.20e-07!625;UBERON:0000480!4.44e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.52e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.07e-10,68;UBERON:0003104,5.88e-10,160;UBERON:0009142,5.88e-10,160;UBERON:0007100,8.82e-08,27;UBERON:0002100,2.42e-07,199;UBERON:0001134,7.63e-07,62;UBERON:0002036,7.63e-07,62;UBERON:0003082,7.63e-07,62;UBERON:0002385,8.40e-07,64;UBERON:0001015,8.40e-07,64;UBERON:0000383,8.40e-07,64 | |||
|phase1_expression=1.99846217197612,1.92690471501885,1.40954404095971,3.00219895059391,4.02264984984559,0.872338524100369,2.53299878168311,0.631719873426831,0,1.96587149201207,4.18680700783456,0.873765488520689,1.05506791291381,4.95065411840187,4.63956326019082,0,0,0,0,2.70866327768933,2.44800829493104,1.56727360739044,0.85870796139317,0.410623275218653,0.502170558379211,0,0,0,0,0,0,2.75826367343678,2.409647350226,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,6.03630773733273,2.68511379871414,0,1.00267582127178,1.01392563272577,1.5905718941022,3.40644409211845,1.13441780596881,1.55210578223795,1.40535657109002,1.83370705696798,3.64295288292542,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,0,5.23312862571041,0,0.379891534993739,0.132409180813219,2.29469296599051,0,0.560677600142307,3.20246987189115,2.71334303258876,2.8008993185979,0.404132016209064,1.14423332179421,6.81108424402191,10.94734256512,1.87457145467037,0.312160076830321,0,0.298897361103602,0.822041490506354,0.647491777472526,0.140450806702248,0.408308342509787,1.47401180774122,0.206651562351531,0,0,1.82032272387605,3.59309070908119,1.85169725349473,1.25118519871964,0,0.877955241761676,0,0.150238058906597,2.26864366320042,1.4351170855109,3.63047560991565,1.05965950579781,0.300091096084402,0.103052529238439,1.8034837803194,1.30281799432113,3.37552664482532,2.82567314967476,2.27190396819703,1.56484827691909,6.95078044320891,2.4850671476163,0.906768884048762,1.01736355386293,1.15956511897978,0.545492241181669,0.573609190778008,2.31750041646231,2.38553582978673,1.62671520017326,2.28054321033815,1.26160425437814,2.18986415445498,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,6.173610169971,13.2307840246988,0,0,0,0,0,1.54411029268673,2.52425656439839,1.1240175325762,0,1.48141512253647,2.6064664424826,0,1.44331342025273,1.27523445472584,1.99594780200897,0.144366447761074,0,0,0,0,0,0,0,1.87467667973554,0.503946384596579,2.26840155587818,1.16426079513703,1.45316969256981,3.83382679165211,0,0,0.207328115540772,0,0,0.126995788584338,0,1.17217447210047,0,0,0.300343057843917,0,2.46688385559794,3.48768055066624,2.71351657537515,1.03417372606222,0,0,1.86156681609409,0,1.02882949704857,2.83698264046557,1.0656887160644,4.57529579706072,20.6196210048748,2.46972101034231,0,2.13235169245527,1.58390374586686,0,0,0.099972991182057,0,0,0,0,1.14861935834114,0,0.868687840005475,0.410952645100767,1.79060963239896,0,0,0,0,0.76228387266739,1.30139853857622,0,0.502548796003046,0.637938751653163,0,0,0,5.5211171273613,4.00136416847742,3.52644530809656,0.415941723061614,0.535286966391485,1.10391690523754,0.819989904948992,5.41702979509894,11.3703752027992,6.2083842775503,0.664225598535437,2.39679919104214,1.65078867489357,10.7690636604507,10.2943027143257,0,0,0,1.21251028578504,1.66435439510497,3.62868351995616,2.23297027036899,2.76231551918512,2.52594084989766,1.28139149255701,3.07024349440022,1.12597744800525,1.48418066444991,1.07946785661859,2.13074070375753,0.9033987161519,1.03850885836724,0.813472649219715,0,3.00759705454927,0.276242966807689,1.03333003348146,1.0925470080403,2.62248829918848,0.451199612907412,0.385076685522074,3.13739907670742,1.46139224653261,0.211103257785751,0,0.170093705276516,0.647747748306418,1.54227252690289,4.6060894382455,5.01689773854853,1.01950509218015,0,2.0148727924996,0,0,0.769350375349168,2.95213181129735,0.325378394664303,0.309123034943167,0,0,1.14853107599234,1.30012049207304,4.82051789532479,2.32009723901093,2.46477787383431,2.14905144616581,0.689182862422653,2.14840489736547,4.35050081742686,1.36362603865761,5.9651463883314,1.15699440752685,1.53752053892085,1.27612712494584,0.708104465988849,0.464845549297286,2.20368642781448,0,0,1.06461206063404,0,0,0,4.46590043231601,1.2655176988749,0.953150969619124,4.09436466098134,5.99114583247489,1.27281299170375,0,3.95719406683292,4.39259247577688,2.70968525395079,1.01091240786658,1.58510321173008,0,10.727942259971,0,0,2.32049849393576,1.83827061539827,2.26016233240486,1.10273068709225,0,0.438450885253763,4.05142873986681,7.21484227251296,0,0,1.12678241012897,0.860468113224309,1.3754865741837,0.35667105148125,1.06428319221179,1.26664581178598,0.987884678879706,4.17420491142287,2.79947776195986,0.288666338176536,2.01090682660736,1.08890984861323,0.564862804660675,0.43050537267123,1.68471475667626,1.7737206141467,0.229723400206959,0,0,0,0,0,0,0,0,3.52519434720661,2.88743956579008,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,1.23087398947712,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0.47748896947538,1.18785872333055,2.15012491469462,0,0,0.333926115068718,0,0,0.597743964753209,1.10513566212459,0.503865495708552,0,0,0.622079175323615,0,0,0,0.493217028184668,0,0,0,0.185536196323703,0,0,0,1.449999150869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| ||
|short_description=p3@CCDC8 | |||
}} | }} |
Latest revision as of 20:34, 18 September 2015
Short description: | p3@CCDC8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC8_5end |
Coexpression cluster: | C3805_Mammary_skeletal_Mesenchymal_Osteoblast_Corneal_Pericytes_Fibroblast |
Association with transcript: | 115bp_to_ENST00000540252_5end |
EntrezGene: | CCDC8 |
HGNC: | 25367 |
UniProt: | F5GX02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 9.72e-07 | 61 |
electrically active cell | 9.72e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
compound organ | 1.07e-10 | 68 |
mesenchyme | 5.88e-10 | 160 |
entire embryonic mesenchyme | 5.88e-10 | 160 |
primary circulatory organ | 8.82e-08 | 27 |
trunk | 2.42e-07 | 199 |
skeletal muscle tissue | 7.63e-07 | 62 |
striated muscle tissue | 7.63e-07 | 62 |
myotome | 7.63e-07 | 62 |
muscle tissue | 8.40e-07 | 64 |
musculature | 8.40e-07 | 64 |
musculature of body | 8.40e-07 | 64 |