FFCP PHASE1:Hg19::chr19:41985048..41985050,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:41985048..41985050,- to FFCP PHASE1:Hg19::chr19:41985048..41985050,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:41985048..41985050,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_at_chr19:41985048..41985050,- | |||
|id=chr19:41985048..41985050,- | |||
|ontology_enrichment_celltype=CL:0002139!2.51e-51!24;CL:0000115!4.33e-42!35;CL:0000071!3.54e-39!18;CL:0002546!3.54e-39!18;CL:0002078!1.19e-31!44;CL:0000213!1.89e-22!57;CL:0000215!1.89e-22!57;CL:1000413!1.22e-20!9;CL:0002543!2.38e-14!6;CL:0002544!2.66e-14!6;CL:0005020!1.37e-13!6;CL:0002138!1.37e-13!6;CL:0005022!1.37e-13!6;CL:0002618!4.33e-08!3;CL:0000076!1.35e-07!62;CL:0000222!1.89e-07!119;CL:0002144!1.94e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.75e-120;24!CL:0000071;2.91e-91;18!CL:0000115;8.70e-83;36!CL:0002078;2.47e-52;45!CL:1000413;8.16e-47;9!CL:0000213;1.36e-34;58!CL:0000215;1.36e-34;58!CL:0002543;7.05e-32;6!CL:0002544;1.20e-31;6!CL:0002138;3.82e-30;6!CL:0002618;4.84e-17;3!CL:0002144;1.52e-15;3!CL:0000076;2.26e-14;63!CL:0002545;3.20e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.10e-120,24;CL:0000115,1.92e-100,36;CL:0000071,1.78e-91,18;CL:0002546,1.78e-91,18;CL:0002078,3.34e-79,45;CL:0000213,3.76e-60,58;CL:0000215,3.76e-60,58;CL:1000413,5.38e-47,9;CL:0002543,6.05e-32,6;CL:0002544,7.88e-32,6;CL:0005020,3.94e-30,6;CL:0002138,3.94e-30,6;CL:0005022,3.94e-30,6;CL:0000222,8.84e-26,121;CL:0000076,3.22e-23,63;CL:0002618,4.73e-17,3;CL:0002144,1.64e-15,3;CL:0002545,2.28e-11,2;CL:0002321,2.44e-09,250;CL:0000066,2.80e-09,253 | |||
|ontology_enrichment_development_v019=CL:0002546;2.91e-91;18!CL:0005022;3.82e-30;6!CL:0000222;3.05e-10;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.54e-39!18;UBERON:0004638!3.54e-39!18;UBERON:0004852!3.54e-39!18;UBERON:0000487!5.51e-31!22;UBERON:0006914!1.43e-26!25;UBERON:0003915!1.22e-20!9;UBERON:0004700!1.22e-20!9;UBERON:0001917!1.22e-20!9;UBERON:0000055!5.00e-20!69;UBERON:0004872!2.20e-18!84;UBERON:0007023!1.01e-16!115;UBERON:0002049!2.22e-16!79;UBERON:0007798!2.22e-16!79;UBERON:0001009!1.07e-15!113;UBERON:0004535!2.38e-15!110;UBERON:0000477!2.41e-15!286;UBERON:0004111!2.55e-15!241;UBERON:0001981!4.60e-14!60;UBERON:0007500!4.60e-14!60;UBERON:0004537!4.60e-14!60;UBERON:0006965!4.60e-14!60;UBERON:0003914!2.51e-13!118;UBERON:0002465!6.45e-13!10;UBERON:0000025!2.11e-12!194;UBERON:0001638!3.41e-12!9;UBERON:0003920!3.41e-12!9;UBERON:0004582!3.41e-12!9;UBERON:0001473!5.96e-10!8;UBERON:0004536!5.96e-10!8;UBERON:0006558!5.96e-10!8;UBERON:0000119!1.11e-08!312;UBERON:0000483!2.12e-08!309;UBERON:0001915!1.94e-07!3;UBERON:0001982!1.94e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.91e-91;18!UBERON:0001986;2.91e-91;18!UBERON:0004852;2.91e-91;18!UBERON:0000487;6.17e-74;22!UBERON:0006914;1.41e-64;25!UBERON:0003915;8.16e-47;9!UBERON:0004700;8.16e-47;9!UBERON:0001917;8.16e-47;9!UBERON:0000490;5.54e-44;33!UBERON:0000055;7.43e-26;65!UBERON:0001473;1.72e-22;8!UBERON:0004536;1.72e-22;8!UBERON:0006558;1.72e-22;8!UBERON:0001638;4.50e-21;9!UBERON:0003920;4.50e-21;9!UBERON:0004582;4.50e-21;9!UBERON:0007500;1.71e-18;56!UBERON:0001981;1.71e-18;56!UBERON:0004537;1.71e-18;56!UBERON:0002465;6.86e-18;10!UBERON:0002049;1.53e-16;75!UBERON:0007798;1.53e-16;75!UBERON:0010523;1.52e-15;3!UBERON:0001915;1.52e-15;3!UBERON:0001982;1.52e-15;3!UBERON:0003914;8.40e-13;74!UBERON:0000025;1.57e-11;93!UBERON:0004535;2.01e-11;109!UBERON:0005800;3.20e-11;2!UBERON:0001515;3.20e-11;2!UBERON:0001009;5.85e-11;112!UBERON:0002066;2.04e-10;5!UBERON:0004111;2.16e-09;130!UBERON:0001637;1.05e-08;42!UBERON:0003509;1.05e-08;42!UBERON:0004572;1.05e-08;42!UBERON:0000947;1.27e-08;21!UBERON:0010191;1.27e-08;21!UBERON:0002405;2.29e-08;27!UBERON:0002135;9.92e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.78e-91,18;UBERON:0001986,1.78e-91,18;UBERON:0004852,1.78e-91,18;UBERON:0000487,4.14e-74,22;UBERON:0006914,9.94e-65,25;UBERON:0003915,5.38e-47,9;UBERON:0004700,5.38e-47,9;UBERON:0001917,5.38e-47,9;UBERON:0000055,1.09e-46,68;UBERON:0002049,5.70e-40,78;UBERON:0007798,5.70e-40,78;UBERON:0007500,1.58e-31,59;UBERON:0001981,1.58e-31,59;UBERON:0004537,1.58e-31,59;UBERON:0006965,1.58e-31,59;UBERON:0004535,2.92e-29,109;UBERON:0001009,2.55e-28,112;UBERON:0004872,8.36e-26,83;UBERON:0001473,1.76e-22,8;UBERON:0004536,1.76e-22,8;UBERON:0006558,1.76e-22,8;UBERON:0001638,4.07e-21,9;UBERON:0003920,4.07e-21,9;UBERON:0004582,4.07e-21,9;UBERON:0003914,1.58e-20,117;UBERON:0004111,2.47e-18,240;UBERON:0002465,6.99e-18,10;UBERON:0010523,1.64e-15,3;UBERON:0001915,1.64e-15,3;UBERON:0001982,1.64e-15,3;UBERON:0000025,5.75e-14,192;UBERON:0000490,2.59e-12,148;UBERON:0005800,2.28e-11,2;UBERON:0001515,2.28e-11,2;UBERON:0003081,1.36e-10,203;UBERON:0002066,2.01e-10,5;UBERON:0001637,7.83e-09,42;UBERON:0003509,7.83e-09,42;UBERON:0004572,7.83e-09,42;UBERON:0000947,1.14e-08,21;UBERON:0010191,1.14e-08,21;UBERON:0000483,3.42e-08,306;UBERON:0000119,4.70e-08,309;UBERON:0000926,5.54e-07,315;UBERON:0004120,5.54e-07,315;UBERON:0006603,5.54e-07,315 | |||
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|short_description=p@chr19:41985048..41985050,- | |||
}} | }} |
Latest revision as of 08:32, 26 July 2015
Short description: | p@chr19:41985048..41985050, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:41985048..41985050, - |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.10e-120 | 24 |
endothelial cell | 1.92e-100 | 36 |
blood vessel endothelial cell | 1.78e-91 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.78e-91 | 18 |
meso-epithelial cell | 3.34e-79 | 45 |
lining cell | 3.76e-60 | 58 |
barrier cell | 3.76e-60 | 58 |
endothelial cell of artery | 5.38e-47 | 9 |
vein endothelial cell | 6.05e-32 | 6 |
aortic endothelial cell | 7.88e-32 | 6 |
lymphangioblast | 3.94e-30 | 6 |
endothelial cell of lymphatic vessel | 3.94e-30 | 6 |
vascular lymphangioblast | 3.94e-30 | 6 |
mesodermal cell | 8.84e-26 | 121 |
squamous epithelial cell | 3.22e-23 | 63 |
endothelial cell of umbilical vein | 4.73e-17 | 3 |
capillary endothelial cell | 1.64e-15 | 3 |
thoracic aorta endothelial cell | 2.28e-11 | 2 |
embryonic cell | 2.44e-09 | 250 |
epithelial cell | 2.80e-09 | 253 |