FFCP PHASE1:Hg19::chr19:41107249..41107295,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:41107249..41107295,+ to FFCP PHASE1:Hg19::chr19:41107249..41107295,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8425 | |EntrezGene=8425 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6717 | |HGNC=6717 | ||
|TSSclassifier=strong | |||
|UniProt=E7EUU1,B3KXY6,Q8N2S1 | |UniProt=E7EUU1,B3KXY6,Q8N2S1 | ||
|association_with_transcript=0bp_to_ENST00000396819,NM_001042545,uc002ooi.1_5end | |||
|cluster_id=chr19:41107249..41107295,+ | |||
|coexpression_cluster_id=C3343 | |||
|description=CAGE_peak_1_at_LTBP4_5end | |||
|id=chr19:41107249..41107295,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.95e-25!115;UBERON:0000477!8.70e-12!286;UBERON:0004119!5.23e-11!169;UBERON:0000925!5.23e-11!169;UBERON:0006595!5.23e-11!169;UBERON:0000481!1.18e-10!347;UBERON:0004111!2.37e-09!241;UBERON:0001007!3.25e-09!155;UBERON:0001555!3.25e-09!155;UBERON:0007026!3.25e-09!155;UBERON:0000483!4.16e-09!309;UBERON:0000119!1.20e-08!312;UBERON:0004921!1.44e-08!129;UBERON:0004185!1.44e-08!129;UBERON:0000161!4.07e-08!35;UBERON:0000924!9.02e-08!173;UBERON:0006601!9.02e-08!173;UBERON:0000153!1.27e-07!129;UBERON:0007811!1.27e-07!129;UBERON:0004121!3.16e-07!169;UBERON:0000064!5.63e-07!219;UBERON:0000468!6.01e-07!659;UBERON:0000033!7.10e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.13e-08;33!UBERON:0007023;6.46e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.46e-25,114;UBERON:0011216,1.33e-14,223;UBERON:0004119,4.08e-14,160;UBERON:0000925,4.08e-14,160;UBERON:0006595,4.08e-14,160;UBERON:0001007,1.05e-11,145;UBERON:0001555,1.05e-11,145;UBERON:0007026,1.05e-11,145;UBERON:0004921,2.31e-11,118;UBERON:0004121,1.47e-08,171;UBERON:0000924,1.47e-08,171;UBERON:0006601,1.47e-08,171;UBERON:0002050,1.66e-08,564;UBERON:0004111,2.63e-08,240;UBERON:0000161,2.73e-08,36;UBERON:0000483,4.17e-08,306;UBERON:0000923,5.79e-08,560;UBERON:0010316,5.79e-08,560;UBERON:0005291,5.79e-08,560;UBERON:0006598,5.79e-08,560;UBERON:0010317,5.79e-08,560;UBERON:0002532,5.79e-08,560;UBERON:0000119,1.44e-07,309;UBERON:0001004,2.87e-07,74 | |||
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| ||
|short_description=p1@LTBP4 | |||
}} | }} |
Latest revision as of 02:29, 18 September 2015
Short description: | p1@LTBP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LTBP4_5end |
Coexpression cluster: | C3343_heart_aorta_cervix_prostate_penis_rectum_smooth |
Association with transcript: | 0bp_to_ENST00000396819, NM_001042545, uc002ooi.1_5end |
EntrezGene: | LTBP4 |
HGNC: | 6717 |
UniProt: | E7EUU1B3KXY6Q8N2S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.46e-25 | 114 |
organ system subdivision | 1.33e-14 | 223 |
endoderm-derived structure | 4.08e-14 | 160 |
endoderm | 4.08e-14 | 160 |
presumptive endoderm | 4.08e-14 | 160 |
digestive system | 1.05e-11 | 145 |
digestive tract | 1.05e-11 | 145 |
primitive gut | 1.05e-11 | 145 |
subdivision of digestive tract | 2.31e-11 | 118 |
ectoderm-derived structure | 1.47e-08 | 171 |
ectoderm | 1.47e-08 | 171 |
presumptive ectoderm | 1.47e-08 | 171 |
embryonic structure | 1.66e-08 | 564 |
anatomical conduit | 2.63e-08 | 240 |
orifice | 2.73e-08 | 36 |
epithelium | 4.17e-08 | 306 |
germ layer | 5.79e-08 | 560 |
germ layer / neural crest | 5.79e-08 | 560 |
embryonic tissue | 5.79e-08 | 560 |
presumptive structure | 5.79e-08 | 560 |
germ layer / neural crest derived structure | 5.79e-08 | 560 |
epiblast (generic) | 5.79e-08 | 560 |
cell layer | 1.44e-07 | 309 |
respiratory system | 2.87e-07 | 74 |