FFCP PHASE1:Hg19::chr19:38755462..38755531,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:38755462..38755531,+ to FFCP PHASE1:Hg19::chr19:38755462..38755531,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10653 | |EntrezGene=10653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11247 | |HGNC=11247 | ||
|TSSclassifier=strong | |||
|UniProt=O43291 | |UniProt=O43291 | ||
|association_with_transcript=260bp_to_uc002ohr.1,uc002ohs.1_5end | |||
|cluster_id=chr19:38755462..38755531,+ | |||
|description=CAGE_peak_3_at_SPINT2_5end | |||
|id=chr19:38755462..38755531,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.94e-13!254;CL:0002076!4.92e-09!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.47e-08;42!CL:1000507;1.44e-07;10!CL:1000494;1.44e-07;10!CL:1000497;7.07e-07;17!CL:0002518;7.07e-07;17!CL:1000449;8.45e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.93e-15,253;CL:0002076,2.30e-10,42;CL:1000507,1.47e-07,10;CL:1000494,1.47e-07,10;CL:1000497,6.76e-07,17;CL:0002518,6.76e-07,17;CL:1000449,8.08e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.55e-10!106;DOID:299!2.00e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:299;9.07e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.73e-12,106;DOID:299,9.08e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0000464!6.66e-13!104;UBERON:0002553!9.01e-09!70;UBERON:0000466!2.76e-08!126;UBERON:0003886!1.02e-07!63;UBERON:0005177!4.09e-07!107;UBERON:0007023!7.28e-07!115;UBERON:0000064!7.72e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;1.44e-07;10!UBERON:0009773;1.44e-07;10!UBERON:0001231;1.44e-07;10!UBERON:0004810;1.44e-07;10!UBERON:0006554;3.55e-07;30!UBERON:0001008;3.55e-07;30!UBERON:0006555;8.45e-07;15!UBERON:0004819;8.45e-07;15!UBERON:0001285;8.45e-07;15!UBERON:0007684;8.45e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,7.97e-08,47;UBERON:0005177,1.24e-07,101;UBERON:0004810,1.47e-07,10;UBERON:0001008,2.52e-07,48;UBERON:0006555,3.30e-07,16;UBERON:0004819,3.30e-07,16;UBERON:0004211,8.08e-07,15;UBERON:0009773,8.08e-07,15;UBERON:0001231,8.08e-07,15;UBERON:0001285,8.08e-07,15;UBERON:0007684,8.08e-07,15;UBERON:0004208,8.08e-07,15 | |||
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|phase1_expression=0.726713517082227,0.214100523890983,1.26858963686374,3.00219895059391,0.893922188854576,0.872338524100369,0,0,0,46.1979800622837,245.626011126294,53.299694799762,60.4026380143159,2.47532705920093,8.61633176892581,0.672325146451775,0,0,0.487932798790507,6.40229501999297,3.87601313364081,3.44800193625897,4.00730381983479,4.37998160233229,1.38096903554283,0,0,0,3.93364276848904,4.22212337906934,5.57338043937874,55.1652734687356,35.5422984158335,46.958759291182,0,16.9181386660032,54.9032821556164,1.66198622559563,1.80490002723128,3.25516306073778,12.0914356089559,5.83008598834163,8.49999373192816,2.03557534291391,4.53451132426571,2.66842467306598,1.62700325833979,3.28934310417461,1.23882548358041,3.16461631554365,2.30544635876191,3.31075121844019,1.03423704220986,0.645484683583826,2.70852973188684,1.88242339542605,2.45615535052061,2.47195832889593,1.53041946185451,1.60464513538047,1.91801137739712,1.64925650093358,2.39356389145958,1.70489900213078,3.48251086354301,0.56738522469114,1.24564449799115,3.01498398308092,4.69334626578181,3.04064382587163,3.02699751316684,4.05105399586321,4.1140110367315,1.47878700418359,2.12604299965044,3.77385561915077,3.03287304095537,3.30389164251314,1.6072558669708,1.42506371870624,1.9891667719909,2.19196984517561,12.3197371122926,12.0150494477669,12.4531295540898,14.5088275672612,12.8126715851524,9.77079147922622,13.2208974556972,14.3108063180305,14.2303242277362,24.6639619535794,19.4959346343867,48.9033915742396,31.388479526966,37.663924122836,2.360517241366,2.75107533924415,3.70082698199117,3.34372990781356,6.19252306603822,4.2610302516126,5.84480185223734,3.11949279278486,1.76763544484902,1.32920336750173,1.35401931882508,7.04502258491213,7.54344215847294,2.46656856905514,4.42160028457357,2.31842468588042,4.00373720537563,7.22360235842225,7.31748666634838,2.15287751125376,1.91610246800961,1.71813722741315,1.26509846009751,2.86708872891687,3.90650072313851,3.8018081777935,2.40920190524436,2.68771883424279,2.49861453104692,2.36777252044017,0.821127996921047,4.43534835094411,0.267440195783507,9.99288386791313,0,0.670700859703636,1.15076305659177,1.0843174571537,3.00802746381534,4.49024208778554,0.795285947051099,9.73269740605272,20.4195205074387,31.4855744396841,30.1273314927422,82.3858384880613,118.760263983369,73.0445352285326,23.3674123431372,22.6368658489047,21.8051055250939,65.8234123082744,116.114966888366,74.291500265913,0.198762407366705,0,1.38856200643038,0,0,0.275118041940067,0.626984899610432,0.775250277507987,0,0.66944122552934,0.402829317109147,0.760272105718513,2.68468263302986,0,0,5.53658315361295,8.08305741454211,6.98191178996598,0,0.949265659568129,1.28241220751285,2.63560834872127,11.6334079244498,139.550096685611,0,2.65924074495618,0,4.30254931123221,1.06400514659507,5.04609840128076,0,0,0,0,0,1.21085942115945,0.576175924479999,0,0,1.71141546463335,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0,0,0.600952235626387,0.567160915800105,0.538168907066586,4.27114777637135,0.211931901159562,1.20036438433761,0.103052529238439,0.257640540045629,0.930584281657949,0,0,0.252433774244115,0.368199594569197,0,1.42003837006646,1.0075209822764,0.169560592310488,51.9871695009268,67.641037906527,52.4852409561877,94.4076485443068,104.168397900687,103.877384925349,82.6178608472502,110.26421183265,146.720898348484,1.56449532329816,5.14592750554308,0,0,0,0,0,0,0,0,0,0,0,0,2.95262181849859,0,3.2925920906512,0,0,0,1.18157981336281,0,38.3723928254514,13.2107213929865,25.6815667856184,47.2087363682002,48.6560226472293,47.6830492566427,0,0,23.0930147240437,30.7215573183954,8.21860859650752,8.37325397014228,6.94478268864916,7.41991193714933,54.52410345919,60.0940313466411,16.2503224017682,1.63802985597466,9.06650089961242,80.6110972286282,74.4160827920948,44.2338303396246,18.9864068130038,23.5413490196309,44.0890081039993,14.7798971368783,20.0750429550155,8.29312462163088,4.61183850934277,6.69084897159814,0,0,0,3.4214489204541,0,0,0,0.672786506072164,4.79556075716608,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,9.72990245129524,13.5609414686674,6.32501818449095,4.31324739884849,8.04033550838797,0,0,0,0,0,0.788123040807709,1.2937654491571,2.18183161675572,0.508189248444927,3.90419561572865,23.1986643833309,24.1223422081462,22.3278563078607,0,0,0.828831026872071,1.59498939234882,9.00306937907419,0.271265023699736,0.831883446123229,0.178428988797162,0.946214490203608,0.117141414992713,0,0,0,0,1.84369168541703,0.0868836144680828,3.32861967686659,2.40200396667599,3.72182447021197,4.31428401637234,2.881644060693,30.9190122875185,78.2246565699336,43.8465925328036,1.24053903909388,0.61384789315225,0.561320188866147,1.02511319404561,2.55853624533352,1.76939313257968,4.45254199334973,0,0,0,0,0,44.9597152480835,48.3220593430917,25.2301909684356,0,0,0,124.531093162446,75.7830917107441,152.948204989487,162.214539365119,88.8744715278013,6.8240030442538,0.6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| ||
|short_description=p3@SPINT2 | |||
}} | }} |
Latest revision as of 19:11, 17 September 2015
Short description: | p3@SPINT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPINT2_5end |
Coexpression cluster: | NA |
Association with transcript: | 260bp_to_uc002ohr.1, uc002ohs.1_5end |
EntrezGene: | SPINT2 |
HGNC: | 11247 |
UniProt: | O43291 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.93e-15 | 253 |
endo-epithelial cell | 2.30e-10 | 42 |
kidney tubule cell | 1.47e-07 | 10 |
nephron tubule epithelial cell | 1.47e-07 | 10 |
kidney cell | 6.76e-07 | 17 |
kidney epithelial cell | 6.76e-07 | 17 |
epithelial cell of nephron | 8.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
urinary system structure | 7.97e-08 | 47 |
trunk region element | 1.24e-07 | 101 |
nephron tubule epithelium | 1.47e-07 | 10 |
renal system | 2.52e-07 | 48 |
excretory tube | 3.30e-07 | 16 |
kidney epithelium | 3.30e-07 | 16 |
nephron epithelium | 8.08e-07 | 15 |
renal tubule | 8.08e-07 | 15 |
nephron tubule | 8.08e-07 | 15 |
nephron | 8.08e-07 | 15 |
uriniferous tubule | 8.08e-07 | 15 |
nephrogenic mesenchyme | 8.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.73e-12 | 106 |
adenocarcinoma | 9.08e-09 | 25 |