FFCP PHASE1:Hg19::chr19:3606590..3606634,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:3606590..3606634,- to FFCP PHASE1:Hg19::chr19:3606590..3606634,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6915 | |EntrezGene=6915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11608 | |HGNC=11608 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_uc002lyg.1_5end | |||
|cluster_id=chr19:3606590..3606634,- | |||
|description=CAGE_peak_2_at_TBXA2R_5end | |||
|id=chr19:3606590..3606634,- | |||
|ontology_enrichment_celltype=CL:0000055!1.23e-11!180;CL:0000183!1.43e-11!59;CL:0000192!5.21e-11!42;CL:0000514!5.21e-11!42;CL:0000187!4.22e-10!54;CL:0000680!1.07e-09!57;CL:0000056!1.07e-09!57;CL:0000355!1.07e-09!57;CL:0000222!1.47e-09!119;CL:0000359!3.12e-09!32;CL:0000393!3.56e-08!60;CL:0000211!3.56e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.06e-08;32!CL:0002559;2.57e-07;5!CL:0002595;8.07e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.10e-08,32;CL:0000192,3.77e-08,43;CL:0000514,3.77e-08,43;CL:0002559,2.07e-07,5;CL:0002595,7.18e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.10e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.65e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001009!3.52e-13!113;UBERON:0004535!8.95e-13!110;UBERON:0002049!3.41e-11!79;UBERON:0007798!3.41e-11!79;UBERON:0004872!3.51e-11!84;UBERON:0000055!3.73e-11!69;UBERON:0001981!1.43e-10!60;UBERON:0007500!1.43e-10!60;UBERON:0004537!1.43e-10!60;UBERON:0006965!1.43e-10!60;UBERON:0004290!1.80e-10!70;UBERON:0000914!7.34e-10!83;UBERON:0002329!7.34e-10!83;UBERON:0003077!7.34e-10!83;UBERON:0003059!7.34e-10!83;UBERON:0007282!7.34e-10!83;UBERON:0009618!7.34e-10!83;UBERON:0007285!7.34e-10!83;UBERON:0002385!2.38e-09!63;UBERON:0001015!2.38e-09!63;UBERON:0000383!2.38e-09!63;UBERON:0001134!3.16e-09!61;UBERON:0002036!3.16e-09!61;UBERON:0003082!3.16e-09!61;UBERON:0000486!9.53e-09!82;UBERON:0000490!2.41e-08!138;UBERON:0005256!3.05e-08!143;UBERON:0003914!3.20e-08!118;UBERON:0001637!3.91e-08!42;UBERON:0003509!3.91e-08!42;UBERON:0004572!3.91e-08!42;UBERON:0001737!6.05e-08!9;UBERON:0004573!2.11e-07!33;UBERON:0004571!2.11e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.74e-13;9!UBERON:0001557;4.74e-13;9!UBERON:0003513;3.48e-09;7!UBERON:0002073;2.57e-07;5!UBERON:0004573;6.93e-07;33!UBERON:0004571;6.93e-07;33!UBERON:0003834;8.07e-07;5!UBERON:0001533;8.07e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.74e-13,9;UBERON:0004535,8.42e-13,109;UBERON:0001009,4.42e-12,112;UBERON:0004872,6.43e-12,83;UBERON:0007500,1.92e-10,59;UBERON:0001981,1.92e-10,59;UBERON:0004537,1.92e-10,59;UBERON:0006965,1.92e-10,59;UBERON:0002049,4.47e-10,78;UBERON:0007798,4.47e-10,78;UBERON:0000055,1.76e-09,68;UBERON:0003513,3.33e-09,7;UBERON:0004573,3.90e-08,33;UBERON:0004571,3.90e-08,33;UBERON:0001637,2.01e-07,42;UBERON:0003509,2.01e-07,42;UBERON:0004572,2.01e-07,42;UBERON:0002073,2.07e-07,5;UBERON:0005086,2.07e-07,5;UBERON:0003914,2.08e-07,117;UBERON:0003834,7.18e-07,5;UBERON:0001533,7.18e-07,5;UBERON:0001557,8.64e-07,19 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0,0.527533956456907,0.74259811776028,1.32558950291166,1.34465029290355,0,0.730310090387373,0.975865597581014,0.246242116153576,1.63200552995402,0.626909442956176,0,0.273748850145768,1.75759695432724,0,0,0,0.786728553697808,0.383829398097213,0,0,0.6024118375565,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,4.44754626931777,0.853460445133014,1.60158394814405,1.14950487990897,0,0,2.27685187643779,0.587237189370939,0.382273228125229,0,0.560508562981536,0.263384084775077,0.196709770113833,0,0,0.501559486172034,0,0,0,0.111410456885174,0,0,0,0.640456598628376,0.130059347559878,0.657751618414705,0,0,0.889719378972363,1.60524496853828,0,0.566546713487831,0,0.68725489096526,0,0.637130828648193,3.25541726928209,0.950452044448374,0.451725357233318,0.76791966692651,1.24930726552346,0.947109008176067,0.821127996921047,1.20964045934839,0,0.868946423296794,0,0,0.511450247374121,1.0843174571537,1.00267582127178,1.88300474649071,0,1.45990461090791,0,0,0,1.0478326039817,0,0,0,0,0.132957960518865,0,0,0,0,1.72046919021225,1.04142150482278,0.56530794192401,1.25849830862972,0.550236083880135,0.208994966536811,0.516833518338658,1.06729878806013,0,1.61131726843659,3.04108842287405,2.92874469057803,0,0.81014194788176,0.17859945656816,0.22452937262617,0.337834441449967,1.53316637465883,0,0.549605231791222,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0.709336764396714,0,2.1349799145941,0,0,1.0776853765575,1.63461903113459,1.21085942115945,1.15235184896,0.234321431833797,0.312160076830321,0.570471821544449,0.597794722207204,0.23486899728753,0,0.561803226808994,0.408308342509787,0.491337269247072,1.34323515528495,1.18800285728205,0,0.910161361938026,4.31170885089743,0.168336113954066,0.125118519871964,0.554128230968366,0.438977620880838,0.612975591598039,0.45071417671979,1.24775401476023,1.4351170855109,0.85422955527427,0.423863802319124,1.20036438433761,0.618315175430633,0.772921620136887,1.11670113798954,2.19409231913646,0.487185025805993,0.757301322732344,0.276149695926898,1.2931684545505,2.4850671476163,1.0075209822764,1.01736355386293,0.386521706326594,0,0,0,0,0.348581828608555,0.310983165046111,0.252320850875628,0,1.56449532329816,5.14592750554308,9.66944449467364,3.25057549622385,5.77503585335668,5.56041960187266,6.40621822296786,6.50729780685401,8.05146000946476,6.75426276686459,4.03360052488864,8.08987848960986,3.53198637225623,3.07797725557112,2.21446636387394,16.8290128564135,2.057870056657,2.94017422771084,0,0.982827216677626,5.31710916013264,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.352226082707465,0.721832238805369,0.925971025153221,0.380508304469197,0,0,0.492434012174795,1.40402559083543,0.297262324577456,0,0,0.425325291727159,0,0,0.383382679165211,0,0,0,0,0,0,3.4378958300245,3.51652341630141,0,0.102827492703324,2.10240140490742,0,4.26098120512371,2.1798003441664,3.9602674343313,0.129271715757778,0,0,0.797814349754612,0,0.514414748524284,0,0.799266537048298,0.857867961948885,0,0.823240336780769,1.30294473717494,0.710783897485092,0,0.602878754119172,0.871533458600294,0.899756920638513,0,0,0,0.479249710983165,0,1.42636905040718,0.723906533337896,0.205476322550383,0,0,0,0,0.256686072559497,0,0,0,0.167516265334349,0,0,0,0.828831026872071,0,1.50051156317903,0.271265023699736,0.415941723061614,0.535286966391485,0.473107245101804,0.234282829985426,0,0,0,0,1.29058417979192,1.04260337361699,15.076689124631,9.60801586670397,0.620304078368662,0.215714200818617,0.640365346820666,0,1.66435439510497,0.604780586659361,0,0.153461973288062,0,0,1.53512174720011,0.482561763430822,0,1.23367755042124,0.710246901252508,1.56041596426237,0.519254429183621,1.16210378459959,0,0,0,0.114814448164607,0.546273504020151,0.524497659837696,0,0,0.784349769176855,0,0,1.13733384070897,0.340187410553031,0.647747748306418,0,1.08378575017541,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,1.33953315142039,0.54941678891006,0.247528499761764,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.460511024178389,0.275673144969061,0.537101224341368,0.435050081742686,0.596586391912706,0.356128142586949,0,0,0,0,1.39453664789186,1.25924938732256,1.3940745403212,1.54016790088044,2.12922412126809,0.869932992075073,1.8532421910392,0.143124886741991,7.44316738719335,0.949138274156178,3.8126038784765,1.27948895655667,1.28381696410176,3.5002357271853,0,0.539617372749944,1.64722217841633,0.589062011728432,1.41527737101321,1.58510321173008,1.68503382495592,0.975267478179181,3.1682753652067,2.11300293513511,0.545999645631943,0.282810863907425,0,2.75682671773062,2.65375590096488,2.63070531152258,0.578775534266688,0.655894752046633,1.01455188481352,0.6196469961995,0.845086807596724,0.430234056612155,0.589494246078727,0.35667105148125,1.06428319221179,1.47775344708365,0.987884678879706,0.379473173765715,0,0,0,0,2.16530741786592,0,0,0,0.229723400206959,3.5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| ||
|short_description=p2@TBXA2R | |||
}} | }} |
Latest revision as of 12:37, 17 September 2015
Short description: | p2@TBXA2R |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TBXA2R_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_uc002lyg.1_5end |
EntrezGene: | TBXA2R |
HGNC: | 11608 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.10e-08 | 32 |
smooth muscle cell | 3.77e-08 | 43 |
smooth muscle myoblast | 3.77e-08 | 43 |
hair follicle cell | 2.07e-07 | 5 |
smooth muscle cell of the subclavian artery | 7.18e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.74e-13 | 9 |
cardiovascular system | 8.42e-13 | 109 |
circulatory system | 4.42e-12 | 112 |
splanchnic layer of lateral plate mesoderm | 6.43e-12 | 83 |
epithelial tube open at both ends | 1.92e-10 | 59 |
blood vessel | 1.92e-10 | 59 |
blood vasculature | 1.92e-10 | 59 |
vascular cord | 1.92e-10 | 59 |
vasculature | 4.47e-10 | 78 |
vascular system | 4.47e-10 | 78 |
vessel | 1.76e-09 | 68 |
trunk blood vessel | 3.33e-09 | 7 |
systemic artery | 3.90e-08 | 33 |
systemic arterial system | 3.90e-08 | 33 |
artery | 2.01e-07 | 42 |
arterial blood vessel | 2.01e-07 | 42 |
arterial system | 2.01e-07 | 42 |
hair follicle | 2.07e-07 | 5 |
hair follicle placode | 2.07e-07 | 5 |
epithelial tube | 2.08e-07 | 117 |
thoracic segment blood vessel | 7.18e-07 | 5 |
subclavian artery | 7.18e-07 | 5 |
upper respiratory tract | 8.64e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.65e-08 | 14 |