FFCP PHASE1:Hg19::chr19:35646006..35646021,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:35646006..35646021,+ to FFCP PHASE1:Hg19::chr19:35646006..35646021,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53827 | |EntrezGene=53827 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4029 | |HGNC=4029 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DB9 | |UniProt=Q96DB9 | ||
|association_with_transcript=330bp_to_ENST00000342879_5end | |||
|cluster_id=chr19:35646006..35646021,+ | |||
|description=CAGE_peak_6_at_FXYD5_5end | |||
|id=chr19:35646006..35646021,+ | |||
|ontology_enrichment_celltype=CL:0002087!5.08e-28!119;CL:0002031!4.78e-26!124;CL:0000738!1.06e-24!140;CL:0000037!1.45e-23!172;CL:0000566!1.45e-23!172;CL:0000988!4.29e-23!182;CL:0002032!7.76e-23!165;CL:0000837!7.76e-23!165;CL:0002057!8.25e-19!42;CL:0000860!1.01e-17!45;CL:0000839!3.76e-16!70;CL:0002194!6.24e-16!63;CL:0000576!6.24e-16!63;CL:0000040!6.24e-16!63;CL:0000559!6.24e-16!63;CL:0000557!5.32e-15!71;CL:0000766!8.04e-15!76;CL:0002009!9.88e-15!65;CL:0000763!4.52e-12!112;CL:0000049!4.52e-12!112;CL:0000838!4.32e-11!52;CL:0000542!4.60e-11!53;CL:0000051!4.60e-11!53;CL:0000003!4.88e-11!722;CL:0000134!2.66e-07!358;CL:0000063!8.58e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-31;33!CL:0002057;1.41e-31;33!CL:0000473;1.08e-20;39!CL:0000234;1.08e-20;39!CL:0000576;6.62e-14;48!CL:0002087;5.99e-09;104!CL:0000624;5.50e-08;6!CL:0000766;2.74e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.71e-25,42;CL:0002057,6.71e-25,42;CL:0002087,7.35e-23,115;CL:0002031,2.08e-21,120;CL:0000473,8.56e-21,48;CL:0000234,8.56e-21,48;CL:0000738,2.27e-18,136;CL:0002194,2.29e-16,59;CL:0000576,2.29e-16,59;CL:0000040,2.29e-16,59;CL:0000559,2.29e-16,59;CL:0002032,5.05e-16,161;CL:0000837,5.05e-16,161;CL:0000037,1.24e-15,168;CL:0002009,1.38e-15,61;CL:0000839,4.20e-15,66;CL:0000557,9.18e-15,67;CL:0000988,3.71e-14,177;CL:0000766,3.25e-13,72;CL:0000763,3.37e-09,108;CL:0000049,3.37e-09,108;CL:0000624,1.09e-07,6;CL:0000838,1.29e-07,52;CL:0000542,2.16e-07,53;CL:0000051,2.16e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.53e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.62e-15!102;UBERON:0003061!8.62e-15!102;UBERON:0002193!4.78e-13!112;UBERON:0002371!3.42e-12!80;UBERON:0001474!7.98e-12!86;UBERON:0004765!1.97e-10!101;UBERON:0001434!1.97e-10!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.96e-12,76;UBERON:0001474,1.04e-10,82;UBERON:0002405,3.06e-10,93;UBERON:0002390,4.08e-10,98;UBERON:0003061,4.08e-10,98;UBERON:0004765,4.33e-10,90;UBERON:0002193,3.10e-09,108;UBERON:0001434,2.33e-08,100 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0.791300934685361,0.123766352960047,0,0,0,0.730310090387373,0,0.369363174230364,0.408001382488506,0,0,0,0,1.83392173795083,1.9704141467987,1.8890587515283,0.393364276848904,0.767658796194425,0.77408061658038,0,0,0,0.46480320348181,0.568676929949686,0.293600439334847,0,0.401088894940283,0.651032612147555,0.223915474239924,0.647787332037959,0.257575567634187,2.18097358169347,2.64513160582167,1.4555043671269,4.41615170120801,6.57868620834921,5.88442104700697,3.45230870786581,3.07392847834921,2.83778675866302,3.44745680736619,1.93645405075148,0,1.12945403725563,4.91231070104122,2.47195832889593,2.44867113896722,1.92557416245656,1.91801137739712,0.989553900560148,1.59570926097305,0.426224750532694,2.90209238628584,5.10646702222026,0.622822248995575,4.52247597462138,3.65038042894141,2.6062661364614,0.605399502633369,2.57794345191295,0.949387162322653,0.633765858935825,0.212604299965044,0.419317291016752,1.23561494261145,0.450530678524519,0.16072558669708,0.570025487482497,0.79566670879636,0.182664153764634,0,1.09227722252426,0.889509253863555,0.426730222566507,0.400395987036012,1.14950487990897,0,0,1.1384259382189,0.587237189370939,0.764546456250458,1.32171328579026,0.560508562981536,0.526768169550154,1.7703879310245,2.35806457649499,1.02800749499755,1.5046784585161,2.28145586643513,1.89379122293893,1.94826728407911,2.22820913770347,0.589211814949674,1.77227115666897,1.35401931882508,2.30564375506215,3.38154303655683,2.46656856905514,4.42160028457357,1.44901542867526,1.63115219478266,1.07016331235885,3.1360657141493,2.26618685395132,1.14966148080576,1.71813722741315,1.51811815211702,0.318565414324097,0.651083453856419,0.950452044448374,1.35517607169996,0.895906278080929,1.24930726552346,0,0,0.80642697289893,1.33720097891754,0.724122019413995,0,0,0,0.722878304769133,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0,0.0654895377488563,0.364295288292542,0.741568885568859,0.97364218096405,1.0447784237956,0.664789802594326,0.953962497221368,0,0.74291500265913,0.198762407366705,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0,0,1.52054421143703,0.24406205754817,0.367663080345869,0,0,0,0.450445921933289,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0,0,0,0,0.24666754841716,0,0.134710672069688,0.653847612453835,0.454072282934794,0,0,0,0,0.448346041655403,0.117434498643765,0,0.280901613404497,0,0.245668634623536,0,0,0,0.910161361938026,0,0.168336113954066,0.250237039743928,0,0.438977620880838,0.30648779579902,0,0.113432183160021,0.717558542755448,0.213557388818567,0.211931901159562,0,0.206105058476878,0.257640540045629,0,0,0.487185025805993,0.757301322732344,0.184099797284599,0.161646056818812,0.710019185033229,0.503760491138201,0.508681776931463,0.966304265816484,0.272746120590835,1.43402297694502,0.853815942907168,0.265059536642971,0.348581828608555,0.518305275076852,0.756962552626885,0,0,0.643240938192885,2.76269842704961,0,0,0.591534000199219,0,0.241011029883482,0.330881918197182,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0.492434012174795,0.936017060556951,0.148631162288728,2.81201501960331,0.335964256397719,0.708875486211932,0.0895585227028483,0.290633938513962,1.53353071666084,1.47798971368783,0.880484340132261,0,0.576479813667846,0.50496973370552,0,0.381988425558278,0,0,0,0.300343057843917,0,0.224262168690721,0,0.22001485746285,0.258543431515556,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.602878754119172,0.871533458600294,0.299918973546171,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0.358121926479791,0.224170287987055,1.37921532141349,1.50939302401662,1.15508732651774,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0.368738337083406,0.260650843404249,0.195801157462741,0,1.24060815673732,0.647142602455851,0.640365346820666,0,0,0.604780586659361,0.248107807818777,0,0,0,0,0,0,1.23367755042124,0,0.328508624055237,0,0.116210378459959,0,1.20303882181971,0.0920809889358963,0.114814448164607,0.364182336013434,0.393373244878272,0,1.00119938235739,0.784349769176855,1.46139224653261,0,0,0.340187410553031,0.647747748306418,0,0.270946437543853,0,0.764628819135115,0.831076008928724,0,0.219259876645935,0,0,0,0,0,0.366277859273374,0.247528499761764,0,0,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0,0.929691098594572,0,0.6970372701606,0.616067160352178,1.59691809095107,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0.274537029736055,0.235624804691373,1.81964233415984,1.58510321173008,0,0,0.974853958525138,1.05650146756755,0.136499911407986,0.141405431953713,0,3.30819206127675,0,1.31535265576129,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0.143411352204052,0,0,0.709522128141196,0,0,0,0.349934720244983,0.192444225451024,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| 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| ||
|short_description=p6@FXYD5 | |||
}} | }} |
Latest revision as of 10:31, 17 September 2015
Short description: | p6@FXYD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FXYD5_5end |
Coexpression cluster: | NA |
Association with transcript: | 330bp_to_ENST00000342879_5end |
EntrezGene: | FXYD5 |
HGNC: | 4029 |
UniProt: | Q96DB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.71e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.71e-25 | 42 |
nongranular leukocyte | 7.35e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 2.08e-21 | 120 |
defensive cell | 8.56e-21 | 48 |
phagocyte | 8.56e-21 | 48 |
leukocyte | 2.27e-18 | 136 |
monopoietic cell | 2.29e-16 | 59 |
monocyte | 2.29e-16 | 59 |
monoblast | 2.29e-16 | 59 |
promonocyte | 2.29e-16 | 59 |
hematopoietic oligopotent progenitor cell | 5.05e-16 | 161 |
hematopoietic multipotent progenitor cell | 5.05e-16 | 161 |
hematopoietic stem cell | 1.24e-15 | 168 |
macrophage dendritic cell progenitor | 1.38e-15 | 61 |
myeloid lineage restricted progenitor cell | 4.20e-15 | 66 |
granulocyte monocyte progenitor cell | 9.18e-15 | 67 |
hematopoietic cell | 3.71e-14 | 177 |
myeloid leukocyte | 3.25e-13 | 72 |
myeloid cell | 3.37e-09 | 108 |
common myeloid progenitor | 3.37e-09 | 108 |
CD4-positive, alpha-beta T cell | 1.09e-07 | 6 |
lymphoid lineage restricted progenitor cell | 1.29e-07 | 52 |
lymphocyte | 2.16e-07 | 53 |
common lymphoid progenitor | 2.16e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.96e-12 | 76 |
bone element | 1.04e-10 | 82 |
immune system | 3.06e-10 | 93 |
hematopoietic system | 4.08e-10 | 98 |
blood island | 4.08e-10 | 98 |
skeletal element | 4.33e-10 | 90 |
hemolymphoid system | 3.10e-09 | 108 |
skeletal system | 2.33e-08 | 100 |