FFCP PHASE1:Hg19::chr19:31840278..31840300,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:31840278..31840300,- to FFCP PHASE1:Hg19::chr19:31840278..31840300,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57616 | |EntrezGene=57616 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30700 | |HGNC=30700 | ||
|TSSclassifier=strong | |||
|UniProt=Q63HK5 | |UniProt=Q63HK5 | ||
|association_with_transcript=-88bp_to_NM_020856,uc002nsy.3_5end | |||
|cluster_id=chr19:31840278..31840300,- | |||
|description=CAGE_peak_5_at_TSHZ3_5end | |||
|id=chr19:31840278..31840300,- | |||
|ontology_enrichment_celltype=CL:0000055!2.36e-10!180;CL:0000057!2.53e-09!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.80e-11!22;UBERON:0001950!5.82e-11!20;UBERON:0001049!1.15e-10!57;UBERON:0005068!1.15e-10!57;UBERON:0006241!1.15e-10!57;UBERON:0007135!1.15e-10!57;UBERON:0000955!1.22e-10!69;UBERON:0006238!1.22e-10!69;UBERON:0002780!2.32e-10!41;UBERON:0001890!2.32e-10!41;UBERON:0006240!2.32e-10!41;UBERON:0001869!2.41e-10!32;UBERON:0002020!2.85e-10!34;UBERON:0003528!2.85e-10!34;UBERON:0001893!3.31e-10!34;UBERON:0001017!5.88e-10!82;UBERON:0007023!6.36e-10!115;UBERON:0003080!8.40e-10!42;UBERON:0002791!9.20e-10!33;UBERON:0000073!2.08e-09!94;UBERON:0001016!2.08e-09!94;UBERON:0005743!3.14e-09!86;UBERON:0000956!5.32e-09!25;UBERON:0000203!5.32e-09!25;UBERON:0002616!5.89e-09!59;UBERON:0000475!1.95e-08!365;UBERON:0000033!2.04e-08!123;UBERON:0002346!2.04e-07!90;UBERON:0000153!2.13e-07!129;UBERON:0007811!2.13e-07!129;UBERON:0000924!3.94e-07!173;UBERON:0006601!3.94e-07!173;UBERON:0003075!4.18e-07!86;UBERON:0007284!4.18e-07!86;UBERON:0004121!7.91e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.44e-19;20!UBERON:0002619;1.66e-17;22!UBERON:0000956;5.14e-15;25!UBERON:0000203;5.14e-15;25!UBERON:0001869;3.09e-11;32!UBERON:0002791;7.01e-11;32!UBERON:0001893;2.34e-10;34!UBERON:0003528;3.15e-10;34!UBERON:0002020;3.15e-10;34!UBERON:0002780;3.24e-09;41!UBERON:0001890;3.24e-09;41!UBERON:0002021;6.74e-08;5!UBERON:0001872;8.59e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,1.40e-20,20;UBERON:0002619,2.04e-18,22;UBERON:0000956,8.31e-16,25;UBERON:0000203,8.31e-16,25;UBERON:0002780,9.12e-14,41;UBERON:0001890,9.12e-14,41;UBERON:0003080,9.12e-14,41;UBERON:0006240,9.12e-14,41;UBERON:0002791,2.12e-13,32;UBERON:0001869,2.12e-13,32;UBERON:0003528,2.20e-12,34;UBERON:0002020,2.20e-12,34;UBERON:0001893,2.20e-12,34;UBERON:0000073,1.39e-09,53;UBERON:0002616,1.39e-09,53;UBERON:0000955,5.53e-09,68;UBERON:0006238,5.53e-09,68;UBERON:0001049,8.00e-09,56;UBERON:0005068,8.00e-09,56;UBERON:0006241,8.00e-09,56;UBERON:0007135,8.00e-09,56;UBERON:0001016,6.64e-08,89;UBERON:0003056,9.87e-08,61;UBERON:0002021,1.27e-07,5;UBERON:0001017,1.39e-07,81;UBERON:0001872,2.99e-07,5;UBERON:0004111,4.45e-07,240 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0.893922188854576,0.872338524100369,0,1.26343974685366,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0.990130823680373,0,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0,0.940364164434263,0,0,0,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0,0,0,0,0,0,0,0,0,0.863077176966451,1.0246428261164,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0.989553900560148,1.19678194572979,1.27867425159808,0,0.56738522469114,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0.209658645508376,0.112328631146495,0.450530678524519,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664601683750863,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0.267440195783507,0.289648807765598,0,2.01210257911091,0.383587685530591,0.361439152384566,0.50133791063589,0.434539556882471,0,0,0.189069634328136,0,0.087834785693126,1.17881167947941,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0.56530794192401,1.25849830862972,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0.183201743930407,0,3.87780264148325,0.872188104285069,1.98788780678127,0.12663051166458,0.397227542439656,0.286836620748814,0.709336764396714,0,1.06748995729705,0.24666754841716,0,0.134710672069688,0.326923806226917,0.302714855289863,0,0.234321431833797,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.309977343527296,1.18800285728205,1.23633464639278,0,1.43723628363248,0.336672227908132,0.375355559615893,0.831192346452549,0.877955241761676,0,0.751190294532984,0.113432183160021,0.179389635688862,0.213557388818567,1.27159140695737,0.600182192168805,0.721367704669072,0.257640540045629,0.558350568994769,1.0126579934476,0.779496041289589,0.252433774244115,0.644349290496095,0.161646056818812,0.710019185033229,0.10075209822764,0.508681776931463,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0.643240938192885,4.14404764057442,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,0,0,0,0,0.882926198829301,0,0.171567810298526,0.109750285408626,0,0.201057944823262,0,0,0,0,0.34779121492523,0.234817388471643,0.144366447761074,0,0,0.790204397959275,0,0.492434012174795,0,0.297262324577456,0,0,0.567100388969546,0.179117045405697,0,0.383382679165211,1.97065295158377,0.088048434013226,0,0.288239906833923,0,0.380987365753014,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.36669142910475,0.387815147273333,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.799266537048298,1.28680194292333,0.542621605391443,0,0,1.06617584622764,0,0.602878754119172,0,0,0,0.502257091432126,0,1.19812427745791,0,1.42636905040718,0.289562613335158,0.410952645100767,1.07436577943937,0,0.197030760201927,1.07813787429759,0.385029108839245,0,0,1.54657762555539,0.167516265334349,0,0.749007023947182,0,0.828831026872071,0.36807447515742,1.00034104211935,0.542530047399471,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0.664225598535437,0.184369168541703,0.781952530212746,0.391602314925481,0,0.413536052245775,0.215714200818617,0.213455115606889,0,0,0.604780586659361,0.744323423456331,0.767309866440312,0.280660094433074,0.384417447767103,0.511707249066704,0.321707842287215,0,1.3878872442239,1.59805552781814,1.23190734020714,0.519254429183621,0.581051892299796,0,0,0.368323955743585,0.803701137152247,1.27463817604702,1.44236856455367,0,0,0,1.46139224653261,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.48335359146061,0.154048617114644,0,0.137836572484531,0.429680979473094,0.290033387828457,0.340906509664404,0.445160178233687,0,0,0.638063562472921,0.4046311234222,0.929691098594572,0,2.0911118104818,1.84820148105653,0,0.869932992075073,0,0.143124886741991,0,0,0.571890581771475,0.255897791311334,0.855877976067841,1.27281299170375,2.35484592059769,0.359744915166629,1.09814811894422,0.589062011728432,0,0,1.26377536871694,0,0.243713489631284,0,0.9554993798559,1.69686518344455,1.13008116620243,0,0,0.876901770507525,0,0,0,0,0.845086807596724,0.430234056612155,0.392996164052485,1.07001315444375,0.354761064070598,0.633322905892992,0.329294892959902,0,0.349934720244983,0.0962221127255121,0,0,0.376575203107117,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569134746787313,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0,0,0,0,0.270455678475983,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,0.422008249231538,1.11308705022906,0.824019371133798,0,0.398495976502139,1.10513566212459,0,0.511343412510774,0,0,0,0,0.511572370226872,2.36744173528641,0,0,0.969332746095218,1.20598527610407,0,0,0,0,0,0,0,0.344743373241465,1.16641845353302,1.04174996959975,0.885741385813839,0.60298219312704,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,1.76985594558733,0,0,0,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99526193107850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| ||
|short_description=p5@TSHZ3 | |||
}} | }} |
Latest revision as of 05:08, 17 September 2015
Short description: | p5@TSHZ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TSHZ3_5end |
Coexpression cluster: | NA |
Association with transcript: | -88bp_to_NM_020856, uc002nsy.3_5end |
EntrezGene: | TSHZ3 |
HGNC: | 30700 |
UniProt: | Q63HK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neocortex | 1.40e-20 | 20 |
regional part of cerebral cortex | 2.04e-18 | 22 |
cerebral cortex | 8.31e-16 | 25 |
pallium | 8.31e-16 | 25 |
regional part of forebrain | 9.12e-14 | 41 |
forebrain | 9.12e-14 | 41 |
anterior neural tube | 9.12e-14 | 41 |
future forebrain | 9.12e-14 | 41 |
regional part of telencephalon | 2.12e-13 | 32 |
cerebral hemisphere | 2.12e-13 | 32 |
brain grey matter | 2.20e-12 | 34 |
gray matter | 2.20e-12 | 34 |
telencephalon | 2.20e-12 | 34 |
regional part of nervous system | 1.39e-09 | 53 |
regional part of brain | 1.39e-09 | 53 |
brain | 5.53e-09 | 68 |
future brain | 5.53e-09 | 68 |
neural tube | 8.00e-09 | 56 |
neural rod | 8.00e-09 | 56 |
future spinal cord | 8.00e-09 | 56 |
neural keel | 8.00e-09 | 56 |
nervous system | 6.64e-08 | 89 |
pre-chordal neural plate | 9.87e-08 | 61 |
occipital lobe | 1.27e-07 | 5 |
central nervous system | 1.39e-07 | 81 |
parietal lobe | 2.99e-07 | 5 |
anatomical conduit | 4.45e-07 | 240 |