FFCP PHASE1:Hg19::chr19:14889386..14889394,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30817 | |EntrezGene=30817 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3337 | |HGNC=3337 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHX3,Q9H7M4,Q53GP0 | |UniProt=Q9UHX3,Q9H7M4,Q53GP0 | ||
|association_with_transcript=-33bp_to_ENST00000315576,ENST00000346057,ENST00000353005,ENST00000353876,ENST00000392967,NM_013447,NM_152916,NM_152917,NM_152918,NM_152919,NM_152920,NM_152921,uc002mzo.1,uc002mzp.1,uc002mzq.1,uc002mzr.1,uc002mzs.1,uc002mzt.1,uc002mzu.1_5end | |||
|cluster_id=chr19:14889386..14889394,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_6_at_EMR2_5end | |||
|id=chr19:14889386..14889394,- | |||
|ontology_enrichment_celltype=CL:0000839!8.45e-38!70;CL:0000557!3.14e-37!71;CL:0000766!1.33e-34!76;CL:0002274!4.31e-27!5;CL:0000457!4.31e-27!5;CL:0002191!4.31e-27!5;CL:0000097!4.31e-27!5;CL:0000831!4.31e-27!5;CL:0002028!4.31e-27!5;CL:0002194!1.79e-25!63;CL:0000576!1.79e-25!63;CL:0000040!1.79e-25!63;CL:0000559!1.79e-25!63;CL:0002009!1.27e-24!65;CL:0000763!1.56e-22!112;CL:0000049!1.56e-22!112;CL:0002031!4.75e-20!124;CL:0000738!1.69e-19!140;CL:0000037!3.03e-15!172;CL:0000566!3.03e-15!172;CL:0000163!3.71e-15!9;CL:0002032!2.90e-14!165;CL:0000837!2.90e-14!165;CL:0000988!3.21e-14!182;CL:0002087!3.31e-14!119;CL:0002057!4.41e-14!42;CL:0000860!4.69e-13!45;CL:0000235!6.92e-08!10 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.50e-156;5!CL:0000163;1.37e-87;9!CL:0000151;1.48e-22;36!CL:0000766;8.36e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.50e-156,5;CL:0002028,1.50e-156,5;CL:0000163,1.37e-87,9;CL:0000151,9.32e-23,36;CL:0000839,1.15e-12,66;CL:0000557,1.71e-12,67;CL:0000766,1.07e-11,72;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.49e-34!102;UBERON:0003061!3.49e-34!102;UBERON:0002193!6.61e-34!112;UBERON:0002371!9.84e-33!80;UBERON:0001474!2.99e-30!86;UBERON:0002405!6.65e-30!115;UBERON:0004765!2.55e-25!101;UBERON:0001434!2.55e-25!101;UBERON:0003081!6.49e-16!216;UBERON:0002204!4.70e-14!167;UBERON:0002106!3.52e-11!3;UBERON:0004854!3.52e-11!3;UBERON:0009034!3.52e-11!3;UBERON:0002095!3.52e-11!3;UBERON:0004782!3.52e-11!3;UBERON:0003281!3.52e-11!3;UBERON:0009664!3.52e-11!3;UBERON:0002296!3.52e-11!3;UBERON:0005602!3.52e-11!3;UBERON:0001179!3.52e-11!3;UBERON:0006293!3.52e-11!3;UBERON:0002372!5.28e-09!1;UBERON:0001961!5.28e-09!1;UBERON:0001744!5.28e-09!1;UBERON:0001735!5.28e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.92e-11,76;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.51e-09,90;UBERON:0002405,2.87e-09,93;UBERON:0002390,7.68e-09,98;UBERON:0003061,7.68e-09,98;UBERON:0001434,1.11e-08,100;UBERON:0002193,4.22e-08,108 | |||
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|short_description=p6@EMR2 | |||
}} | }} |
Latest revision as of 06:00, 16 September 2015
Short description: | p6@EMR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EMR2_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -33bp_to_ENST00000315576, ENST00000346057, ENST00000353005, ENST00000353876, ENST00000392967, NM_013447, NM_152916, NM_152917, NM_152918, NM_152919, NM_152920, NM_152921, uc002mzo.1, uc002mzp.1, uc002mzq.1, uc002mzr.1, uc002mzs.1, uc002mzt.1, uc002mzu.1_5end |
EntrezGene: | EMR2 |
HGNC: | 3337 |
UniProt: | Q9UHX3Q9H7M4Q53GP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.50e-156 | 5 |
basophil mast progenitor cell | 1.50e-156 | 5 |
endocrine cell | 1.37e-87 | 9 |
secretory cell | 9.32e-23 | 36 |
myeloid lineage restricted progenitor cell | 1.15e-12 | 66 |
granulocyte monocyte progenitor cell | 1.71e-12 | 67 |
myeloid leukocyte | 1.07e-11 | 72 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.92e-11 | 76 |
bone element | 2.17e-10 | 82 |
skeletal element | 1.51e-09 | 90 |
immune system | 2.87e-09 | 93 |
hematopoietic system | 7.68e-09 | 98 |
blood island | 7.68e-09 | 98 |
skeletal system | 1.11e-08 | 100 |
hemolymphoid system | 4.22e-08 | 108 |